Clarias gariepinus (North African catfish): 128506724
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Entry
128506724 CDS
T10780
Name
(RefSeq) integrin alpha-L-like
KO
K05718
integrin alpha L
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecule (CAM) interaction
cgar04517
IgSF CAM signaling
cgar04518
Integrin signaling
cgar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128506724
04517 IgSF CAM signaling
128506724
04518 Integrin signaling
128506724
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128506724
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128506724
04515 Cell adhesion molecules [BR:
cgar04515
]
128506724
04090 CD molecules [BR:
cgar04090
]
128506724
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128506724
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin alpha subunits
128506724
CD molecules [BR:
cgar04090
]
Proteins
128506724
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
PglZ_1st
vWA_Rv0959
ACT_ACR9_3rd
Motif
Other DBs
NCBI-GeneID:
128506724
NCBI-ProteinID:
XP_053333265
LinkDB
All DBs
Position
18
Genome browser
AA seq
1016 aa
AA seq
DB search
MSMTMSKSPSATLTSCSPSFTHECDGNSYLNGICYQFNGRLKMVTNITPAFQECTESKVN
LVFLFDGSSSMQTSDFNKNKEFIWNIMTTMKNTSIEFAAVQFSSEFRTVFTFKDYVSGTA
KKRLDDERHMKQLTCTHRAIQFTLDHLFNNNKSGANPEAKKALVIITDGAPADLDNNVIH
RCEEQNIARFVIGVGHQVKLEKLEKFASEPKEKNTIMINNYAGLNGLLDNLQNKIFGMEG
TRGMLFGKELSQSGFSAASDKDTLILGAVGSNHWTGNLYEVTGSEASISEMEIKDINLNN
DSYNGYSLVIGQRGRDSLLFSGAPRSNYRGRVTLFRKSTDKWKAISNIAGELIGSYFGGS
VCVLDLDSDNNTDFLVVGAPLYYQPHPQREGRVYIYRLTQQLKLEKQLEISESAQGRFGM
TLVAVSDLNGDQLKDLAVGAPLEDDRKGAVYIYLGNRDHGIRSKYSQRIFASSINKQLQH
FGLSIDGVMDMGQDGLIDIAVGAQGTVLLLRTRPVVSVSAKLGFSPSEINLNHFDCLGSS
DNAIPVLYLSTCFSMTEDTKSKGGVRSGLNVSLELKADAVRMDSRAFFNKDDKTSRSLVK
SVLLNTEVSCYNHTVYMKSCVTDITSPVLFRLNFSQSDHQPSSSNSILNIDSKNTALVEV
PFPNNCQNMSCVSDLHLDFKFLNSTLLLVDQALFIIHVTLLNTGDYSFNTSVVLLYPPGL
SLSLFRTIEANRETVSSCGDHKDAVLKKTTCGISSPVFRRNTRAMFEGVFRVSRFYNWTD
NMQMTLMASSDNNRITSDTTVRTLPLQPSVNVAISPVPELSVTYLNFHLGDKGPKPIIVV
FEVSNLGLKGLPVTVSFRMPTQTGVNLHDLHSHTITVSQNITACKIIPTQKHANRLIEEY
VNFKCQCFSLDPGAAVQFHLSALIIFPNKQQYTGSFGGFKKVDDFFVFAQLDFDKKLHQL
SSDSEKESSRFHNAKISIKSEVVIPPDVVMMIRTSAGGGVLLLFIVFLLGVEVWFL
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgacgatgagcaagtctccatcagccacactcactagttgcagtccaagtttc
acacatgagtgtgatggaaactcatatctgaatggaatctgttaccagttcaatggccgt
ctgaagatggtcaccaacatcacccctgctttccaagagtgtacggagagtaaagtgaac
ctggttttcctttttgacggctccagcagcatgcaaacatctgacttcaataagaataaa
gaattcatatggaacatcatgacaacaatgaagaacacatctattgagtttgctgctgtt
cagttttctagcgaattcaggacagttttcacctttaaagattatgttagtggcacggcg
aagaagagacttgatgacgaaaggcacatgaagcagctcacatgcacacacagagccatc
cagttcacccttgatcatctgtttaataataataagtccggtgcgaatcctgaagctaaa
aaagccctcgtcatcatcacagatggagctcctgctgatttagacaataacgtgatacat
cgctgtgaggaacaaaacatcgctcgctttgttattggggtggggcatcaagtcaaatta
gagaagctggaaaagtttgcctcagagccgaaagagaagaacaccatcatgattaacaac
tacgctggacttaatggacttttggataatttacaaaataagatctttggcatggaggga
actcggggcatgttgtttggtaaagagctgtctcagagtggattcagtgctgcaagtgac
aaggacaccctgattctgggagcggttggatctaatcattggactggaaacctgtatgag
gtcacaggatctgaagcttcgatcagtgagatggaaatcaaagacataaacctaaataat
gattcatacaatggttactctcttgtaattgggcagaggggcagagattctcttttgttc
tctggagcaccaagatctaattacaggggtcgggtgactctgttcaggaagagcactgac
aagtggaaagccatcagcaatatcgcaggagaactgattggctcgtatttcggaggatcg
gtgtgtgtgttagacctggactcagacaacaacactgacttcctcgtggttggagctccg
ctgtattaccaacctcatcctcagagagagggacgggtgtatatctacagactcacacag
cagctgaaattggagaagcagttggagattagtgaatcagctcagggtcggtttgggatg
actttagttgctgtatcagatctgaatggagaccagctgaaggatttagctgttggagct
ccactggaagatgatcgaaaaggagccgtttacatttacctcggcaaccgtgatcacggc
atccgctctaagtacagccagagaatttttgcaagttccattaataagcagcttcagcat
ttcggcttgtcgattgatggtgtaatggacatgggacaggatggtctgatagacattgct
gttggagcacaagggaccgttttactcttgagaactcggccggttgtgtccgtctcagca
aagctcggtttctccccgtctgaaatcaacctgaatcattttgactgcctcggcagctca
gacaacgctattcctgtcctctacctcagcacctgctttagtatgacagaggacaccaaa
agcaaagggggagtaaggagtggcctaaatgtgtcactggagctcaaagctgatgctgtg
agaatggacagtcgtgcatttttcaataaggacgataagacgtccaggagtctggtgaag
tctgtgctcctgaacacagaggtttcctgttacaatcatacagtctatatgaagagctgt
gtaacggacatcacatctccggtgttattccgtctcaacttcagccagtctgatcaccag
ccgagcagctccaactccatactgaacatcgacagcaaaaacacggctcttgtagaggtt
ccttttccgaataactgtcaaaacatgagctgtgtatcagacctgcatctggacttcaag
ttcctgaacagcacattgctgttggtggaccaggcattgtttatcatccatgtgacttta
ctgaacacaggagattactcattcaacaccagtgtggtgctgctctaccctcctggatta
tcactctcactgttcaggaccattgaggcgaacagagagactgtgagtagttgtggtgat
cataaggatgcagtgctaaaaaaaaccacctgtggtatcagttcaccggtttttcgcaga
aacacaagggccatgtttgagggtgtgttccgtgtctctcgtttttacaactggacagac
aacatgcagatgacacttatggccagcagtgataacaacagaattacaagtgacaccaca
gtgaggacactgcctttgcagcccagtgtaaatgtggccatcagccctgttcctgagctt
tctgtaacatatctgaatttccatttgggagataaaggacccaaacccatcattgtcgtg
ttcgaggtgagtaatctgggactgaagggtctgcctgtaacagtaagcttcaggatgccg
actcagactggtgtaaacttgcacgacctgcacagtcacaccatcactgtctcacagaat
atcacagcctgtaagatcataccaactcagaaacatgctaaccgtctgattgaggagtat
gtgaactttaagtgtcagtgtttctcactggatcctggggctgctgtccagtttcatctg
agtgcgctcatcatattccctaataaacaacaatatacagggtctttcggtgggtttaaa
aaggtggacgatttttttgtctttgctcaactagactttgataaaaagcttcatcagtta
tctagtgacagcgagaaagagagcagtagatttcacaacgctaagatcagtataaaatct
gaagtggtcattcctcctgatgtggttatgatgatcaggaccagtgcaggaggaggagtt
ctcctgctcttcattgtcttcttgcttggtgttgaagtgtggtttctttag
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integrated database retrieval system
