KEGG   Clarias gariepinus (North African catfish): 128506729
Entry
128506729         CDS       T10780                                 
Symbol
ears2
Name
(RefSeq) probable glutamate--tRNA ligase, mitochondrial isoform X1
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar00860  Porphyrin metabolism
cgar00970  Aminoacyl-tRNA biosynthesis
cgar01100  Metabolic pathways
cgar01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    128506729 (ears2)
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    128506729 (ears2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cgar01007]
    128506729 (ears2)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cgar03016]
    128506729 (ears2)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cgar02048]
    128506729 (ears2)
Enzymes [BR:cgar01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     128506729 (ears2)
Amino acid related enzymes [BR:cgar01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   128506729 (ears2)
Transfer RNA biogenesis [BR:cgar03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    128506729 (ears2)
 Prokaryotic type
   Other AARSs
    128506729 (ears2)
Prokaryotic defense system [BR:cgar02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    128506729 (ears2)
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2 DUF3828
Other DBs
NCBI-GeneID: 128506729
NCBI-ProteinID: XP_053333272
LinkDB
Position
18:1347298..1350376
AA seq 543 aa
MPVSRVLGSGLVSGFSARFYNKLINNKSVNRRSVSGLTHTHSTHTHRGNVCVAEGEVRVR
FAPSPTGFLHLGGLRTALYNFLFARQQGGTFILRLEDTDQSRLVPGAARDIERTLEWAGI
PPDESVSRGGVYGPYVQSERLSLYAEAAASLIQSGHAYYCFCTNHRLELLKKEALRRGQT
PRYDNRCRHLHGDQVQENLSQGKPHAVRFHLHAEAEPFEDLVFGWTGHAVGEVEGDPVIL
KSDGFPTYHLACVVDDAHMRVSHVLRGAEWLTSTCKHLQLYRALRLTPPTYAHLPLLLNP
DGSKLSKRQGDIYISHFRQQGALPEALLDLITNCGSGFNSNRIGRSLDELISEFNVSKIV
THSAVLDLKKLPEFNRVHLQQHIEDEPQCRLLVDQVQNLLTLTYREQMEEQGVLDHDYIT
RILHMRKRHISSVKDLLSPVYSYLWLRPSVSRQQLEEMSAESRDIISHVMLVIKGQKSEY
TPEFLTAELKLLSKKLKTTKYSLVMKLLRFALTGQQQGPSVGEIMVSLGEDEVYHRLQKS
LEA
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgccggtgtcccgcgtgctcgggtccggtctggtctccgggttcagcgcgcgcttttat
aataaactcattaataataagagtgtaaacagacggagtgtgtcagggctcacacacaca
cacagcacacacactcaccgcggaaatgtgtgtgtcgcggaaggagaagtgcgggtccgg
ttcgcgccgagtcccaccgggttcctacacctgggcggcctgcggacggcgctctataac
ttcctgtttgcgaggcagcagggcgggacgttcatcctgcggctggaggacacggatcag
tcccgcctcgtccccggagcagcgcgggacatcgagcgcacgctggagtgggcgggtatt
ccccctgacgagagtgtgtccagaggaggtgtgtacggtccgtacgtgcagtccgagcgt
ttgagtctgtacgctgaggcagcggcatctctgatacagtcaggccacgcctactactgc
ttctgcaccaatcacagattagagctactcaagaaggaagcactgcgccggggacagacg
ccacggtatgataacaggtgcagacacctccatggtgatcaggtgcaggagaacctgtcc
cagggtaaaccccacgccgtgcgctttcatcttcacgcggaggcggagccgtttgaggac
ctggtgtttggttggacggggcacgcggtgggggaggtggagggcgaccccgtgatcctg
aagagcgacggcttccccacctaccacctggcctgcgtggtggacgacgcgcacatgcgc
gtgagccacgtcctgcgcggcgccgagtggctcacctccacctgtaaacacctgcagctg
taccgcgccctgcgcctgactccgcccacctacgctcacctgccactgctgctgaaccca
gacggaagcaaactgtccaagcggcagggggacatctacatctcccacttcagacagcag
ggggcgctccccgaggcactgctcgacctcatcactaactgtggctccgggttcaacagt
aatcgcatcggtcgaagcctggatgagttgatcagtgagtttaatgtctcaaaaatcgtc
acacactcggctgtgctcgatctcaagaaactcccagaattcaacagggttcacctgcag
cagcacattgaggatgagcctcagtgtcgcctcctggtggaccaagtgcagaatctcctc
actcttacttacagggaacagatggaggagcagggggttctggaccatgattacatcacc
agaatactgcacatgaggaagcgtcacatctcatctgtgaaagatctgctctctccagtg
tactcgtacctgtggctccgcccctccgtatcccggcaacagctggaggagatgagcgcc
gaatcacgtgacatcatcagtcatgtcatgctggtgattaaggggcagaagagtgaatac
actcctgagttcctgacagctgaactgaagctcctcagcaaaaaactaaagacgactaaa
tacagtttagttatgaagttactgaggtttgctctgactggacaacagcagggtcccagt
gtgggtgagatcatggtctctctcggggaggatgaggtttatcatcgtctacagaagagt
ttagaagcttaa

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