Clarias gariepinus (North African catfish): 128506731
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Entry
128506731 CDS
T10780
Name
(RefSeq) integrin alpha-M-like
KO
K05718
integrin alpha L
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecule (CAM) interaction
cgar04517
IgSF CAM signaling
cgar04518
Integrin signaling
cgar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128506731
04517 IgSF CAM signaling
128506731
04518 Integrin signaling
128506731
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128506731
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128506731
04515 Cell adhesion molecules [BR:
cgar04515
]
128506731
04090 CD molecules [BR:
cgar04090
]
128506731
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128506731
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin alpha subunits
128506731
CD molecules [BR:
cgar04090
]
Proteins
128506731
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
VWA_2
ITGAX-like_Ig_3
FG-GAP_3
FG-GAP_2
vWA_Rv0959
PglZ_1st
Motif
Other DBs
NCBI-GeneID:
128506731
NCBI-ProteinID:
XP_053333275
LinkDB
All DBs
Position
18
Genome browser
AA seq
1120 aa
AA seq
DB search
MELLILLLFLGVSLSDGFNVDVSNPETFSGNKEELFGYRVLQYQSDEMKQIIVSAPLGTN
SSGALYSCTVEKNDCSSFYQPDSKAIRFFGMSMTVGTSPSATLTSCSPSFTRECKGTSYL
NGICYQFNGRLKMVTNITPAFQECTESKVNLVFLFDGSSSMQTSDFNKNKEFIWNIMTTM
KNTSIEFAAVQFSSEFRTVFTFKDYVSGTAKKRLDDEGHMKQLTNTHRAIQFTLDHLFNN
NKSGADPEATKALVIITDGAPSDLDNNVIHRCEEQNIARFVIGVGHQVKLEKLEKFASKP
KRNNTFMINNYAGLNELLDNLQNKIFGMEGTRGMLFSKELSQSGFSAASDKDTLILGAVG
SNHWTGNLYEVTGSEASISEMEIKDINLNNDSYNGYSVVVGQRGRDSLVFSGAPRCDHRG
RVTLFRKSTDKWETISNIAGELIGSYFGGSVCVLDLDSDNNTDFLVVGAPLYYQPHPQRE
GRVYIYRLTQQLKLEKQLEISESAQGRFGMTLAAVSDLNGDQLKDLAVGAPLEDDQKGAV
YIYLGNRDHGIRSKYSQRIFASSINKQLQHFGLSIDGVMDMGQDGLIDIAVGAQGSVLIL
RTRPVVSVSAKLSFSPSEINLNHFDCHSSSDNAIPVFYLSTCFNMAEDTKSKGGVRSGLN
VSLELKADAVRKDSRAFFNKKDKTSRSLVKSVLLNTEVSCYNHTVYMKSCVKDTVSPLLF
RLNFSLFDHEPDSSNAILNIDSKTIALVEVPFQINCKNTTCISDLQLNFNFLNSTLLVVD
QAPFIIHVTLLNTGDDSFNTSVVLFYPPGLSLSLFKTIKQNRRTRSSCGDRDEGALNKTT
CSISLPVYRSNTEAVFEGVFRISRDYNWTDVMKMTLVASSDNNRNTSSTTVMKTLPVLYS
VDVAVSSVPELSVTYLNFSLEDKGPKPIHIVFRVRNLGLKGLPVTISFRMPNHTDEKIFY
LDDNTVLSNITACSIIPPQKHDVSWFEQFVNFTCRPFSLDPGSVVHITLSANVTFPNKQQ
YSGKWSFSGFKKEDDFSVFAQLDFDQKFYHQLSGHSENDSSRFHRANINVKAELVVPPDM
AMIIGTGTGGGLLLLFVIILLLKLYCLYCCGHYNIKKATK
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctcatcctgctgctctttcttggtgtctcactctcagatgggtttaatgtt
gacgtgtcgaacccagagacattctcaggaaataaagaggagttgtttggataccgagtg
ctgcagtatcagtctgatgagatgaaacaaattatcgtcagcgctccactaggcacaaac
agttcaggagctctttacagttgcacagtggagaagaatgactgcagctctttttatcag
ccagactcaaaggcgatcaggttctttgggatgtcgatgacagtggggacgtctccatca
gccacactcactagttgcagtccaagtttcacacgcgagtgtaaaggaacttcatatctg
aatggaatctgttaccagttcaatggccgtctgaagatggtcaccaacatcacccctgct
ttccaagagtgtacggagagtaaagtgaacctggttttcctttttgacggctccagcagc
atgcaaacatctgacttcaataagaataaagaattcatatggaacatcatgacaacaatg
aagaacacatctattgagtttgctgctgttcagttttctagcgaattcaggacagttttc
acctttaaagattatgttagtggcacggcgaagaagagacttgatgacgaagggcacatg
aagcagctcacaaacacacacagagccatccagttcacccttgatcatctgtttaataat
aataagtccggtgcggatcctgaggcgactaaagccctcgtcatcatcacagatggagct
ccttctgatttagacaataacgtaatacatcgctgtgaggagcaaaacatcgctcgcttt
gttattggggtggggcatcaagtcaaattagagaagctggaaaagtttgcctcaaagccg
aaaaggaacaacaccttcatgattaacaactacgctggacttaatgaacttttggataat
ttacaaaataagatctttggcatggagggaactcggggcatgttgtttagtaaagagctg
tctcagagcggattcagtgctgcaagtgacaaggacactctcatactgggagcggttgga
tctaatcattggactggaaacctgtatgaggtcacaggatctgaagcttcgatcagtgag
atggaaatcaaagacataaacctaaataatgattcatacaatggttactctgttgtggtt
gggcagaggggcagagattctcttgtgttctctggagcaccgagatgtgatcacaggggt
cgggtgactctgttcaggaagagcactgacaagtgggaaaccatcagcaatatcgcagga
gaactgatcggctcgtatttcggaggatcggtgtgtgtgttagacctggactcagacaac
aacactgacttcctcgtggttggagctccgctgtattaccaacctcatcctcagagagag
ggacgggtgtatatctacagactcacacagcagctgaaattggagaagcagttggagatt
agtgaatcagctcagggtcggtttgggatgactttagctgctgtatcagatctaaatgga
gaccagctgaaggatttagctgttggagctccactggaagatgatcaaaaaggagccgtt
tacatttacctcggcaaccgtgatcacggcatccgctctaagtacagccagagaattttt
gcaagttccattaataagcagcttcagcatttcggcttgtcgattgatggtgtaatggac
atgggacaggatggtctgatagacattgctgttggagcacaagggagcgttttaatcttg
agaactcggccggttgtgtccgtctcagcaaagctcagtttctccccgtctgaaatcaac
ctgaatcattttgactgccacagcagctcagacaacgctattcctgtcttttaccttagc
acctgcttcaatatggcagaggacaccaaaagcaaagggggagtaaggagtggcctaaat
gtgtcactggagctcaaagctgatgctgtgagaaaggacagtcgtgcatttttcaataag
aaagataagacgtccaggagtctggtgaagtctgtgctcctgaacacagaggtttcctgt
tacaatcatacagtctatatgaagagctgtgtaaaggacacagtgtctccactgttattc
cgactcaacttcagcctgtttgatcatgaaccagacagctccaacgccatcctgaacatt
gacagcaaaactattgctcttgtagaggttccctttcagattaactgcaaaaacacgacc
tgtatatcagacctgcagctgaactttaactttctgaacagcacattgctggtggtggat
caggcaccatttattatccatgtgactttactgaacacaggggacgactcgttcaacaca
agcgtggttctgttctaccctcctggattatcactttctctgttcaagaccatcaagcaa
aacagaaggactcgaagcagttgtggagatcgtgacgaaggagcgctgaacaaaaccacc
tgcagtatcagtttacctgtttatcgcagtaacacagaggctgtgtttgagggtgtgttt
cgcatctctcgtgactacaactggactgatgtcatgaaaatgacccttgtggccagcagt
gataacaatagaaatacaagtagcaccacagtgatgaagactctgcctgttctgtacagt
gtagacgtggccgtcagctctgttcctgagctttctgtaacgtatctgaatttctctctt
gaagataaaggccctaaacctatccatattgtgtttagggtgcgtaatctgggactgaag
ggtctgcctgtgacaataagcttcaggatgccgaatcacactgatgaaaagatcttctat
ctggatgataacaccgtcctatcgaatattacagcctgtagcatcataccacctcagaaa
catgatgtaagttggtttgagcagtttgtgaatttcacctgtcgacctttctcactggat
cccgggtctgttgtccatattactctgagtgcaaacgtcacgttccctaataaacagcaa
tattcagggaaatggtctttcagtgggttcaagaaggaggacgatttttctgtctttgct
cagctggactttgatcaaaagttttatcatcagttatctggtcacagcgagaacgattcc
agcagatttcatcgtgctaatatcaatgtaaaagcagagctggttgttcctccggatatg
gctatgataatcgggacaggtacaggaggaggacttctcctgctcttcgtaatcatactg
ctgctgaagttatattgtctttactgctgtggacattacaatatcaaaaaagcaactaaa
tga
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