Clarias gariepinus (North African catfish): 128506846
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Entry
128506846 CDS
T10780
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128506846 (sorcs3a)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Others
Others
128506846 (sorcs3a)
Endosome - Lysosome transport
128506846 (sorcs3a)
Endosome - Golgi transport
128506846 (sorcs3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
128506846
NCBI-ProteinID:
XP_053333419
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Position
18:16451894..16739604
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AA seq
1220 aa
AA seq
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MDALSSGMHLTLCTWLVCSLHLCAVTKAEVTCVSCPLPTLVRIGDVQNNARTITVTITPT
EAGKSLVSSARSRSQPGVQELGTSASGAPNSREVEVMVARAPGAKPRRDQTTRGHRDCAK
VGQTGAALPRRRRSAAQPDELGARARSGDSAESSDALLFVDGQKLRRNRDEGKVAASRSK
EPKVSSTTFALAGDSAHNHAVVYWTGPNSSVILILTKLYDFHLGSVTESSLWRSTDYGTT
YERMNDKVGVKTVLSYLYVCPTNQRKVMLLTDPEFESSVLISSDEGASYQKYRLSFYVLS
LLFHPSQEDWALAYSLDQKLYSSFDFGRKWHLVHERVTPNRFYWSVSGLDKEADLVHMEA
YTSDGNCQYMTCRAQACYESSRTFPFPGYIEPNSLVVQDEYIVIQVTMSGRAAYYVSYQR
GPFVRIKIPKYSLPKDMHILSTDQGQVFAAVQEWNQNDTYNLYISDPHGVYFTLALENVK
TTRGHGGNIMIDLYEVAGIKGMLIANRKVENQVKTYITYNKGRDWRLLQAPATDLEGNEI
YCVQPFCSLHLQLQMSENPYISGSIITKNSVPGVIIAIGNMGSELSFNNVGMFISSDAGN
TWRQIFDEEHNVWFLDKAGALLAVKQPTVPTKHFWISFDEGRQWTHHIFSAIPLFVDGVL
VEPGMENQILTFFGHLSDRSEWQLIKIDYMSLFTKRCAEGDYQTWHLHNQGEPCVMGQKQ
IFIKRRPGNYCMMEKDTRVLSAEPCICRAHDFECDYGYERRGDGNCLPAFWFNPSTVSRS
CSHGLNYFNSTGYRKVAANNCTKGVKEMYTARKQQCPNRPPRGLHLATRDNTLKTNMGSN
VTFIVQLEEGDSMRTNIQLDFGDGTTVSYSNLSWTGEGIRHVYHSTGIFRVTAIAENSLG
TDSSSLYLHVTSPVEHVQLLSPFVVIKNKEVNLTALVWPSHFRTLTYFWWLGNNTEPMIT
LESSISYVFPAEGTYTVTVQVSSSNLILQDTKQIVVQGYFKSLLLSFSPNLDEANPDIPE
WRHDVGRIIKKAVLQVTDIPAEQLLVAVYPGLPTAAELFLLPSKNQSDNRKGNEEDLEQI
SEILSNALNQNLVEFELKPGSGVIVYITQLTLAPLVDSIPRHSSSAMLMLLSVVFLGLAI
FLIYKFKRKIPWINIYAEVNQEKEQEMIGTVGQNDTTPKIKLSEFSSPKELMEKDLEVRV
KRGMINACESTREIPNCTSV
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgttatcatctggcatgcacttgactctgtgcacttggcttgtttgctctttg
catctctgtgccgttaccaaagcggaggtaacttgcgtatcgtgcccgttaccaacgctc
gtaagaatcggggacgtccaaaacaatgcacgcactatcactgtcactatcactcctaca
gaggctgggaaatcacttgtcagttccgcgcgctcgagatcgcaaccgggagttcaggag
ttgggaacgagcgcgagcggcgcgccaaactcgagagaagtggaagtgatggtggcgcgt
gcacccggtgcgaaaccgcggcgcgatcaaactacgcggggacaccgggattgtgcgaaa
gtgggtcaaaccggcgctgcgctcccgagacgcagacggagcgcggcgcaaccggacgag
cttggcgcgcgcgcgcggagcggagactccgcggagtcctcggacgcgctgctgttcgtg
gacggacagaaactgcggcgcaaccgcgacgaggggaaagtcgccgcttccaggtcgaag
gaacccaaagtgagcagtaccactttcgccctggctggagactccgctcacaaccacgct
gtggtttactggaccggaccgaacagcagcgtgattctgatcctgaccaagctttatgac
ttccatttgggcagcgtcactgaaagctccctatggagatcaacagactatggcaccacc
tatgagagaatgaatgacaaagttggagtaaagacagtcctcagttacctgtatgtctgt
cccaccaaccaaaggaaggtaatgttgttgacggatccggagttcgaaagcagcgtcctc
attagctctgatgaaggggccagctaccagaaataccgcctcagtttctacgtcttaagt
ctactttttcatccttcacaagaggactgggctctggcctatagccttgaccagaagctg
tacagctcatttgactttggacggaagtggcatctcgttcacgagcgagtgacccccaac
cgcttctactggtctgtaagtggtctggataaggaagccgatctggtgcacatggaggcg
tacacttcagatggaaattgtcagtacatgacgtgcagagcccaggcttgttatgaatca
agtaggacgttcccgttccccggctacatcgagccaaactcgctggtggttcaggatgaa
tacatcgtcattcaggtcaccatgtctgggagagctgcttattatgtgtcttaccaaagg
ggaccatttgtacgcatcaaaatacctaaatactcccttccaaaagacatgcacatcctg
agcacagatcaaggtcaggtttttgctgctgtgcaagaatggaaccagaacgacacgtac
aacctgtacatctcagatccacatggtgtttacttcactctggctttagaaaatgtcaag
accacccgaggtcatggaggcaacattatgatagacctatatgaggtagcaggaatcaaa
ggcatgctgattgctaataggaaagtggagaaccaggtgaagacttacatcacttataac
aagggccgggactggaggctgctgcaggcgcccgctacggacctggaggggaacgagatt
tactgtgtgcagccattttgttcacttcacctacagctgcagatgtcagaaaacccctac
atctctggaagtattatcaccaagaactcagtaccaggagtgatcatcgctataggcaat
atgggctctgagctctcattcaacaatgtaggaatgttcatatcatcagatgctggaaat
acctggaggcagatatttgatgaggagcacaatgtttggttcctggataaagcaggagct
ctacttgcagtcaagcagccaacagttcctacaaagcatttctggatcagttttgatgaa
gggagacagtggacacatcatattttctcagccatacctctgtttgtggacggtgttctg
gtcgagccaggcatggaaaatcagatcctgacgtttttcggacacttaagtgatcgttct
gagtggcagctgatcaagatcgactacatgtccttgtttactaagcgctgtgccgaaggc
gactatcaaacgtggcacttgcacaatcagggtgagccatgtgtaatgggccaaaagcag
atcttcatcaaacgccgcccgggaaactactgcatgatggaaaaggacaccagggtccta
tcggctgagccttgtatctgtagagcacatgattttgagtgtgattacggctatgagcgg
agaggagacggtaactgcctgcctgcattctggtttaatccttccactgtatcacggagc
tgcagtcacgggctgaactattttaatagcacaggttatcgcaaagtagcagcaaacaac
tgcaccaaaggggtaaaggagatgtacacagccagaaaacagcagtgtcctaatcgccca
cctcgaggactgcacctggcaacccgtgacaacaccctcaaaacaaacatgggctccaac
gtcaccttcattgtacaactggaagagggagactcgatgaggacgaatatccagttggac
tttggggatgggacgacagtgtcctactctaacctcagctggacgggggagggtatcaga
catgtgtaccacagcacaggaatcttccgtgtcactgccatcgctgagaacagcctggga
actgactccagctccctgtacctgcacgtgacatctcctgttgagcatgtccagttgctg
tctccttttgtggtcattaagaacaaggaagtgaacttgactgctttagtctggccttct
cactttcgaactctcacctacttctggtggctggggaacaacacagagccaatgatcact
ttagagagcagtatatcctacgtgtttcctgcggaagggacgtacaccgtaacggtgcag
gtctcatcgtccaacctcatacttcaagacaccaaacaaatcgttgtgcaaggatacttt
aaatccttgcttttatctttttctccaaatctggacgaggccaaccctgacattccggag
tggaggcacgatgtaggcaggataattaaaaaggctgtgctccaagtaaccgatattcct
gctgaacagctcctggtagcagtatacccaggacttccaacagctgctgagcttttcctg
cttcccagcaagaatcagtcagacaacaggaaagggaatgaggaggatcttgagcagatt
tcagaaattctctccaatgcattgaaccagaacttggtagaatttgagctgaaaccagga
tccggagtcatagtttacatcacacagctaacattagctccactggtggactcgatccct
agacatagcagttctgccatgctgatgctactctcagtggttttcttgggtttagccatc
ttcctcatttacaagttcaagagaaaaattccctggattaatatatacgctgaggtgaac
caagagaaagagcaggaaatgattggcacggtgggtcagaatgacacaacacctaaaatc
aagctcagcgagttctccagccccaaagagcttatggagaaggacttggaagtccgtgtt
aaacgtggaatgatcaatgcctgcgaaagcacaagagagattcccaactgtacgagtgtc
tga
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