Clarias gariepinus (North African catfish): 128506881
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Entry
128506881 CDS
T10780
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00310
Lysine degradation
cgar00514
Other types of O-glycan biosynthesis
cgar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128506881
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128506881
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgar01003
]
128506881
Enzymes [BR:
cgar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
128506881
Glycosyltransferases [BR:
cgar01003
]
O-Glycan biosynthesis
O-linked Gal type
128506881
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
IF4E
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
128506881
NCBI-ProteinID:
XP_053333465
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All DBs
Position
18:3253859..3267906
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AA seq
594 aa
AA seq
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MRRRALLQVLFSAAGTLLALGPARAYFPEERSSAESPLQAPRVLLALVCRNSEHSLPHVL
GAIERLRYPKERTAVWVATDHNADNTTAILREWLTKVQTLYHYVEWRPQEEPREYEDEDG
PKHWTDPRYEHVMKLRQAALDTARQMWADYFLLVDCDNLLTNPDVLWKLIKENKTIVAPM
MDSRAAYSNFWCGMTSQGYYKRTPDYMPIRRQDRRGCFPVPMVHSTFLLDLRKQASRELA
FYPPHPEYTWAFDDVIIFAFFARMADVQMYLCNRETYGHLPVPLHTRNSLRDEADNFLHT
LLEVMVKGSPVEPSAHLSVPPKQPDKLGFDEVFMINLLRRLDRRERMLRTLWEQEISCKI
INAVDGKVLNDTQIQALGISMLPGYSDPYHGRPLTKGELGCFLSHYNIWTEIAERGLQRS
LVIEDDLRFEPFFKRRLQKLMKDVEAEQLDWDLIYIGRKRMQVDEPEKPVPNIRNLVEAD
YSYWTLGYMISLQGVNKLLRAEPLKKVLPVDEFLPVMYNKHPVEDYMSHYEVRDLRAFSV
EPLLVYPTHYTGDPGYISDTETSTVWNNEKVTTDWDRERAQKNRGMHSHATSDL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggcgcgcgctgctccaggtgttgttctccgccgcggggacgctgctcgcgctc
gggccggcgcgcgcgtacttcccggaggagcgctcgagcgccgagtctccgctgcaggct
ccgcgcgtgctgctcgcgctggtgtgccgcaactcggagcactctctcccgcacgtgctg
ggcgccatcgagcgcctgcggtaccctaaagagcgcaccgctgtgtgggtggcgacggac
cacaatgcggacaacacgacagccatcctgcgcgagtggctcactaaagtgcagactctg
taccactatgtggagtggagaccgcaggaggagcccagagagtatgaagacgaggacggg
ccgaagcactggaccgatccgcgctacgagcacgtgatgaagctacgacaagcagcactg
gacacggccaggcagatgtgggccgactacttcctgttagtggactgtgataaccttctc
actaaccctgacgtcctctggaagctgataaaagaaaataaaaccattgtggcaccgatg
atggactccagagctgcgtactccaacttctggtgtggaatgacctctcagggctactac
aagcgcacaccagactacatgcccataaggcgtcaggacaggcgtggctgcttccccgtc
cccatggtccactccaccttcctgctggatctcaggaaacaagcatccagagagctggcc
ttctacccacctcaccccgaatacacctgggcctttgatgatgtcatcatcttcgccttc
ttcgcccgtatggcagatgttcagatgtacctgtgtaaccgtgagacttacggccacctc
cccgtccctctgcacacccgtaattccctacgggacgaagccgataacttcctgcacact
ctgctcgaggtcatggtgaaaggttctccggtggaaccctcggcccatctctccgtcccc
ccgaaacaacctgataaactgggctttgatgaggttttcatgattaacctcctgaggcgt
ttggatcggagagagaggatgctgaggactctgtgggagcaggagatcagctgcaagatc
ataaacgctgtggacggcaaggtgttaaacgacactcagatccaggcgttggggatcagc
atgttgccgggttacagtgacccgtatcatggcaggccgctcactaaaggagaactcggc
tgtttcctgtctcactacaacatctggactgagatagcagaacgaggacttcagaggtct
ctggttatagaagacgatctgcgtttcgagccgttctttaagaggagactgcagaaactg
atgaaggacgttgaggcagaacaactcgactgggatttaatttacatcgggaggaagagg
atgcaagtggacgagccggagaaaccggttcctaacatccgcaacctggtcgaagccgac
tattcctactggaccctgggctacatgatctcgctacagggagtcaataagctgctgagg
gcggagcctctgaaaaaagtgcttcctgtagacgagttcctgccggtcatgtacaacaag
cacccagtggaggactacatgtctcactacgaggtgagggatctccgggcgttctccgtt
gagccgttactcgtctaccccacgcactacacgggcgacccgggctacatcagtgacacc
gagacctccaccgtgtggaacaacgagaaagtaaccaccgactgggacagagagcgagca
cagaagaaccgcggcatgcactcacacgctacctcagacctctga
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