Clarias gariepinus (North African catfish): 128506900
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Entry
128506900 CDS
T10780
Symbol
gart
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00230
Purine metabolism
cgar00670
One carbon pool by folate
cgar01100
Metabolic pathways
Module
cgar_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
128506900 (gart)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128506900 (gart)
Enzymes [BR:
cgar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
128506900 (gart)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
128506900 (gart)
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
128506900 (gart)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
ATP-grasp_2
RimK
Motif
Other DBs
NCBI-GeneID:
128506900
NCBI-ProteinID:
XP_053333489
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All DBs
Position
18:complement(21109911..21130161)
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AA seq
1015 aa
AA seq
DB search
MAERVLVIGSGGREHALAWKLAESPHIQQVLVAPGNAGTASCGKISNSAVSVSNHTILAQ
YCKDHNVGLVVVGPEVPLAAGMVDDLTAAGIMCFGPSAKAAQLESSKSFAKSFMDRHSIP
TARWSSFTDPQEACTYIREADFPALVVKASGLAAGKGVIVAKDKDEACKAVLDIMKDKTF
GVAGDTVVVEELLEGEEVSCLCFSDGSTVAAMPPAQDHKRLLDGDQGPNTGGMGAYCPTP
QVPEEMLQQIKTTVLQKTVDGMKEEGVPYVGVLYAGLMLTKQGPKVLEFNCRFGDPECQV
LLPLLKSDLYEVLKNTLQAKLASSPPIWLENSAAVTVVMASEGYPGAYKKGVEITGLSQL
TDMGLQVFHAGTALKEGGGVVSSGGRVLTVTAVRPTLESALSSSNAGVAAVGFPNAVYRR
DIGHRAIAYLTRSRGLTYKDSGVDIAAGNKLVDIIKPLAKATSRSGCSADLGGFAGLFDL
KAAGFVDPILVSGTDGVGTKLKIAQACSIHNTLGQDLVAMCVNDVLAQGAEPLFFLDYFS
CGRLDVGVASSVIRGIAEACQMAGCALLGGETAEMPGVYGAGEYDLAGFCVGAVERDSLL
PRLGDIQEGDVLIGVASSGVHSNGFSLVRKILERAGLQYSSPAPFGQSGQTVGEVLLTPT
KIYSRLLQPILRSGAVKAYAHITGGGLLENIPRVLPKTLAVDMDATHWRIPPVFSWLQKE
GALSEEEMSRTFNCGLGAVLVVSKQDAQRVLRQVQAQEEAWIVGSITHKLPGAEAVVIRN
LKHSLKAGPSPAADSNMAQNGTGQITSSSRKRTKVGVLISGTGTNLQALMEQTKKPSSSA
EIMVVISNRPGVLGLKRASMAGIQTRVVDHKLYGSRAEFDSTIDRVLEEFGVELVCLAGF
MRILTGPFVRKWNGKLLNIHPSLLPSFKGVNAQKQALQAGVRISGCSVHFVAEEVDAGAI
IVQEAVPILSNDTEDSLSERIREAEHRAFPTALELVASSAVRLGEDGRIIWNQPA
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcgtgtgcttgttatcgggagcggtgggcgcgagcatgcactcgcctggaag
ctggctgagtcacctcatatccagcaagtcctagttgcccccggcaatgcaggcacagcc
agctgtggaaagatctccaactctgctgtgagtgtaagtaatcacaccatcctggcacaa
tattgcaaagatcataatgtgggactggttgtggttggcccagaggttcccttagctgca
ggtatggtcgatgatctcactgcagcgggcataatgtgtttcgggccgtctgcaaaggct
gcacagctggaatcgagcaaaagttttgctaaaagtttcatggatcgtcacagcatcccc
acagcacgctggagctccttcactgacccacaggaggcctgcacctacatacgagaagcg
gattttccagcattggtggttaaagcgagtggactggctgcaggaaaaggagtgatcgta
gcaaaggataaggacgaggcctgtaaggcagtgctcgacatcatgaaggacaaaacgttt
ggtgttgctggtgacactgttgtggttgaagagctgcttgagggagaggaagtttcatgt
ttgtgtttcagtgacggctccacagtggctgctatgcccccggcacaggaccataaacgc
ctgctcgatggagatcagggtcctaacacgggggggatgggggcttactgccccacccca
caggtgcctgaggagatgcttcaacagattaagaccacagtactacagaagaccgtggac
ggcatgaaagaagagggcgtgccgtacgtcggtgtgctctatgcagggctaatgttgact
aaacaggggccaaaggtgctggagtttaactgtcgatttggcgaccccgaatgccaggtg
ctgctgcccctcctgaagagtgatctgtacgaggtgttaaagaatacactccaggctaaa
cttgcctccagtcctcctatctggctggaaaacagtgccgccgttactgtggtcatggcc
agtgagggatatcctggagcctacaagaaaggagttgagattacagggctctctcagctc
acagacatggggctgcaggtattccatgctggcactgccctgaaagaagggggcggagtt
gtttcaagcggtgggcgtgtcctgaccgtcacagcggtccgtcccactttagagagtgcc
ctgagcagctccaatgccggtgttgccgctgtgggcttccccaacgcagtgtatcgccgt
gacatcggccaccgcgccatcgcctaccttactcgttccagaggactgacttataaggac
agtggagtggacatagcagcagggaacaagctggtggacataatcaaacctctagccaag
gccacatctcgctcagggtgcagtgctgatctcggaggttttgctgggctgttcgaccta
aaagctgctggatttgttgaccccatacttgtctctggaactgatggagttggcaccaaa
cttaagatcgcacaagcatgcagcatccacaacaccctcgggcaggacttggtagccatg
tgtgtgaacgatgttttggctcagggagcagagccactcttcttcttggattacttctct
tgtgggcggctggacgtgggcgtggcttcctctgtgattcgcgggattgcagaggcttgc
caaatggcgggttgtgccttactgggtggtgagacagccgagatgcctggagtgtacggt
gcaggagagtacgacctggctgggttctgtgtcggtgcagtggaacgagactcccttctt
cccagattaggagacattcaggagggtgacgtgctaattggagtcgcgtcctccggagtg
cacagcaatggcttcagtctagtgaggaagattctggagcgggctggacttcagtatagt
tctccagctccgttcggacaatcaggacaaactgttggcgaggtgctgcttacaccgacg
aaaatttatagccggcttctccaaccgatcctgcgcagtggagcggtgaaagcctacgcc
cacatcactggaggcgggctcttggagaacattcccagagttctgcctaaaacactggct
gtggacatggatgccacccattggcggattcctccggtattctcctggctccagaaggaa
ggcgcgctctctgaagaggaaatgagccgcacttttaactgcggcctcggagcggtgttg
gtggtaagcaagcaggatgcgcagagggtcctaagacaagtccaggcccaggaggaggct
tggatcgtcggctccattacccacaaactgcctggtgcagaagctgtggtcattagaaac
ctgaagcacagtctaaaagcaggtcccagtccagctgctgactcaaacatggcacagaac
ggcacgggtcagataacctccagctcccgcaagaggaccaaagtgggtgtgcttatctca
gggacaggcaccaatcttcaggcactgatggagcagaccaagaagccatcaagttctgct
gagattatggtggtcatctcaaaccggcccggcgtgctgggcttgaagagagcctccatg
gcaggcatacagacacgggtggtggaccataagctctatggcagtcgtgcagagtttgac
agcaccatcgaccgtgttctggaggagtttggagtggagctggtgtgtctcgctggcttt
atgagaatcctcactggaccgtttgtcagaaagtggaacggcaagctgctgaatatccac
ccgtcactgctgccgtccttcaaaggggtgaacgcgcagaagcaagccctgcaggctggg
gttcggatcagcggctgcagcgtgcactttgtggctgaggaggtggatgcaggcgccatc
atcgtacaggaagctgtccccattctatcgaacgacacagaggacagtctatcagagcgc
atccgggaggcggagcatcgggctttcccaactgctttagagcttgtagcgagcagcgca
gtgagacttggggaagatgggcgcatcatctggaaccagccagcgtag
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