Clarias gariepinus (North African catfish): 128506990
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Entry
128506990 CDS
T10780
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128506990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128506990
04090 CD molecules [BR:
cgar04090
]
128506990
04091 Lectins [BR:
cgar04091
]
128506990
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
SIGLEC family
128506990
CD molecules [BR:
cgar04090
]
Proteins
128506990
Lectins [BR:
cgar04091
]
I-type lectins (Siglecs)
128506990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
Ig_5
Ig_4
V-set
HGAL
Ig_6
MAP17
Ig_7
Cadherin_C_2
V-set_CD47
DUF4578
Motif
Other DBs
NCBI-GeneID:
128506990
NCBI-ProteinID:
XP_053333582
LinkDB
All DBs
Position
18:4615548..4621011
Genome browser
AA seq
326 aa
AA seq
DB search
MSLIVMFQLLLFSQLMIIELRVEIPEKAVEGNQTVLVCNTTCRLSDTPVFIWYRNDLRIN
TIKNSINNTLILQPTKADDSGSYSCAVKGHEHRSPARNLTVMYSPKNVSVSVSPSGKLVK
GSSVTLTCSGDANPPVENYNWFKGTKLVGNGNTYTISIIRSEDSGEYKCKCINEVGHQYS
IGVRLDIDNGGQQAVIAGIIACVSSLVLVIIIVLLRRKKMYCWSEDSTVKHDNVAAESAP
PDASPSNTDNQDEVQYASIVHSRKPEGTTVRAPEQDVYANVQHQRGKAEKKYQGNDVEYA
TVQVSSSNRPDSKTAENPSEIYSSLK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcattgttatgtttcagctgttgctcttctctcagctgatgattattgagctt
cgagtagagattcctgaaaaggcggtggagggaaaccaaacagttttagtgtgtaacacc
acctgcaggctctcagacacaccagtgttcatctggtacagaaacgacctccgtattaat
acgatcaagaacagcattaacaacactctgattctgcagcctactaaagcagacgactcg
ggcagttatagctgtgctgtgaaaggtcatgaacaccgttctcctgctcgaaacctcact
gtgatgtattctccaaagaatgtctcagtgtccgtcagtccctctggtaaactagtaaag
ggcagttcagtgactctgacctgcagcggtgatgctaacccacctgtggagaactacaac
tggtttaaggggacaaaattagtaggaaacggaaatacctacaccatctccatcatcagg
tctgaggacagtggagagtacaagtgcaagtgcattaatgaagtgggacatcagtactca
atcggagtacgtcttgacatagataatggtgggcaacaggcagtgattgcaggaataatt
gcatgtgtatcaagtttagtgcttgtaatcatcattgtgcttctgagaagaaaaaagatg
tattgctggtcagaagacagcactgttaagcacgataatgtagccgctgaatctgcaccc
cccgacgcatctccttccaatacagacaatcaggacgaggttcagtacgcgagtattgta
cactcgaggaaacctgagggtaccacagtgagagctcctgagcaggatgtttatgctaat
gtccagcaccaacgtggtaaagcagaaaagaagtatcaggggaatgacgttgagtacgct
acagtacaagtttcctcttcaaacaggcctgacagtaaaacagcagagaatccttcagaa
atctacagcagtcttaaatga
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