Clarias gariepinus (North African catfish): 128507156
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Entry
128507156 CDS
T10780
Name
(RefSeq) synaptic vesicle glycoprotein 2C
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128507156
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128507156
Transporters [BR:
cgar02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
128507156
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GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
Pentapeptide_4
MFS_2
Pentapeptide_3
DUF6077
Motif
Other DBs
NCBI-GeneID:
128507156
NCBI-ProteinID:
XP_053333802
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All DBs
Position
19:complement(27008283..27051683)
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AA seq
728 aa
AA seq
DB search
MENTYRERTSLARGARDIAKEAKRHAVKKVNKAMDRASDEYSGRTYHRFENDEEDEGGDD
DRYYYQDGQAKQHEDDEGSSDATEGHDDEDEIYEGEYQGVPGTGDGQVALGRVVADGAKD
KKELEKEREAEEEELAQQYELIIQECGHGRFQWQLFFVLGLALMSDGVEVFVVGFVLPSA
ETDMCVPNSGAGWLGSIVYLGMMVGAFFWGGLSDKVGRRQCLLVCMSVNGFFAFLSSFVQ
GYSTFLFCRMLSGFGIGGAVPIVFSYFAEFLAREKRGEHLSWLCMFWMIGGIYASAMAWA
IIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVSLTFMPESPRYFLETGKHDEAWMV
LKQVHDTNMRARGEPEKVFTVNRIKIPKQLDEFVEMQSESANPAAKVLFRIRSELRGIWL
TFLKCWDYPVKDNTVKLAIVWFSLSFGYYGLSVWFPDVIKHLQADEYASRVKIHKNERIE
DFTFNFTLENQVHNNGSFINDRFISMKFKSVTFKDSIFQNCFFEDVTSVGTYFKNCTIMD
TFFYNTDIDDSKFIGSSLINSTFTQNKTGCQVTFDDDYSAYWVYFINFLGTLAVLPGNIV
SALLMDKVGRLSMLGGSMVLSGISCFFLWFGTSESMMIAMLCLYNGLSISAWNSLDVVTA
ELYPTDRRGTGFGFCNAMCKLAAVLGNLIFGSLVGITIAIPILLASCVLVAGGLVGLRLP
DTRDNVLM
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacatacagagagagaacttctcttgcccgtggtgctcgcgatatcgccaaa
gaagccaaacgacatgcagtcaaaaaagtgaacaaagccatggaccgggcatcagacgag
tactcaggccgtacgtaccaccgtttcgaaaatgacgaggaagacgagggcggagacgat
gaccgctactactaccaggacggtcaggccaagcaacacgaggatgacgaaggatccagc
gacgccaccgaaggccatgacgacgaagacgagatctacgagggcgagtaccagggtgtg
cccgggacaggggacggacaggtggcactggggcgggtggttgcagatggagcgaaggac
aagaaagagctggagaaagagcgggaggcggaggaggaggagctagcgcaacagtacgag
ctgatcatccaggagtgcggacacggccgcttccagtggcagctcttcttcgtgctgggg
ttggcgctcatgtctgacggcgtggaggttttcgttgttgggttcgtgttgccgagtgct
gagactgacatgtgcgtgcccaactctggagcagggtggctgggtagtatcgtgtacctg
gggatgatggtgggagcgtttttctggggcggtctgtcagataaagtgggccggaggcag
tgtttgctggtgtgtatgtccgtgaacggcttctttgccttcctgtcctcgttcgtgcaa
ggctacagcacattcctcttttgcaggatgctctcgggatttgggattggcggggccgtg
cccatcgtgttctcgtacttcgcagagttcctggcgagggagaagcgtggcgagcacctg
agctggctctgcatgttctggatgataggcggcatctacgcttcagccatggcctgggcc
atcatccctcactacggctggagtttcagcatgggctcagcgtatcagttccacagctgg
agagtgttcgtggtcgtctgtgcactaccgtgtgtctgcgcagtcgtctctcttaccttc
atgccagaaagtccacgctacttcctagagactgggaaacacgatgaggcgtggatggtt
ctgaaacaggtccatgacaccaacatgcgtgcacgaggagaaccagagaaagtttttact
gtgaaccgtataaagatccctaagcagttggatgagtttgttgagatgcagtccgaatct
gcgaaccctgcagctaaagttctcttccgaatccgaagtgaactccgcgggatttggcta
acattccttaagtgctgggattaccctgttaaagacaacacagtgaagctggccatagtg
tggttctcgctgtcttttgggtactacggcctctcagtgtggtttcctgatgtgattaag
caccttcaagcggacgagtacgcgtcgagggtgaagatccacaaaaacgagcgcattgaa
gacttcaccttcaacttcacgctggagaaccaggtgcacaacaatgggtcgttcatcaat
gacaggtttattagtatgaagtttaaatcggtcacctttaaagactccatcttccaaaac
tgcttcttcgaggacgtcacttcggttggtacttacttcaagaactgcaccatcatggac
acctttttctacaatacagatatcgacgactctaagtttatcggctcgtcgttgatcaac
agcacatttacccaaaacaagacgggatgccaggtcacattcgatgacgactacagtgcc
tactgggtgtacttcatcaacttcctagggactctggctgtgttaccaggcaacatagtc
tccgccctcctgatggacaaagtcgggcggttgagcatgctgggaggctcgatggttctg
tcagggatcagttgcttcttcctgtggttcggtaccagcgagtcgatgatgatcgccatg
ctctgcctctataacggcctcagcatatccgcatggaactctctggatgtagtcacagct
gagctgtatcccacagacaggaggggtaccggatttgggttctgcaacgccatgtgtaag
ctggcggccgtgttggggaacctgatcttcggctcgttggtgggcattactatagccatt
cccatcctcctggcatcctgtgtcctggttgccggtggcctcgtgggactccggctccct
gacacgcgtgacaacgtcctcatgtga
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