Clarias gariepinus (North African catfish): 128507159
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Entry
128507159 CDS
T10780
Symbol
gabrg2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128507159 (gabrg2)
04082 Neuroactive ligand signaling
128507159 (gabrg2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128507159 (gabrg2)
Ion channels [BR:
cgar04040
]
Ligand-gated channels
GABA-A
128507159 (gabrg2)
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PH_24
Motif
Other DBs
NCBI-GeneID:
128507159
NCBI-ProteinID:
XP_053333804
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All DBs
Position
19:29429302..29487533
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AA seq
468 aa
AA seq
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MKTMRMRRMMMMALPELFLRLFLCAQLFSSSLQTENDDDEVTNKTWVLTPKVYESDVTHI
LNNLLDGYDNKLRPDIGVKPTVIQTDMFVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFN
STMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLRLTIDAE
CQLKLNNFPMDEHSCPLEFSSYGYPKEEIVYKWKRSSVEVGDIRSWRLYQFSFVGLRNIS
DIVSTFSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGI
TTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFVSNRKPSKNK
DKKKKNPLLRLFPSKPNPTVDIRPRSATAIQMNNATHMQERDEEFGYECLDGKDCTSFFC
CFEDCRSGAWRHGRLHIRVAKIDSYARIFFPTAFGLFNLVYWVSYLYL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatgaggatgaggaggatgatgatgatggcgctccctgagctcttcctcagg
ctcttcctctgcgctcagctcttctccagttcgcttcaaacagaaaatgatgatgacgaa
gtgacaaacaaaacctgggtgttgaccccgaaggtgtacgagagcgacgtcacgcacatc
ctcaacaatttactagacggatacgacaataagctgaggccggatataggagtcaaaccc
actgtgatccaaacggacatgtttgttaatagcatcggccctgtaaacgcaatcaacatg
gagtacaccatcgacatcttcttcgctcagacatggtacgacagacgcctgaagtttaac
agcaccatgaaggtcctgcgtcttaacagcaacatggtgggaaagatctggattcctgac
accttcttccggaactccaagaaggccgacgcccactggattaccacgcccaatcgcatg
ctccggatatggaacgatgggcggatcctgtacacgctgaggttgaccatcgatgccgag
tgccagcttaaactgaataactttcccatggatgagcattcctgtcccctggagttctcg
agctacggttacccgaaggaggagatcgtttataagtggaagcggagttctgttgaggtc
ggagacatccgctcatggagactctaccagttctccttcgtgggtctgaggaacatctca
gatatcgtcagcaccttctcaggtgactatgtggttctcactgtcttcttcgacctgagc
aggagaatgggctacttcaccatccagacctacatcccctgcaccctgattgtcgtcctc
tcctgggtctccttctggatcaacaaggatgccgtccctgctcgcacatccttaggaatc
accacggtgctcaccatgacaacgcttagcaccatcgccagaaagtccctgcccaaagtc
tcgtacgtgacagctatggacctcttcgtgtccgtgtgcttcatcttcgtgttcgcggcg
ttgatcgagtatgggacgctgcactacttcgttagcaaccgcaaacccagcaaaaacaaa
gacaagaagaagaaaaacccgctcctccggctctttccctccaagccgaacccaacggtg
gatatccgtccccgctcggctacggccatccagatgaacaacgccacccacatgcaggag
cgtgacgaggagttcggctacgagtgtctggacggaaaagactgcacgagcttcttctgc
tgctttgaggattgtcgctcgggggcgtggcgccacggccgcctgcacatccgcgtcgcc
aagatcgactcgtacgcacgaatcttcttccccaccgccttcggcctcttcaacctcgtc
tactgggtgtcatacctgtacctgtga
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