Clarias gariepinus (North African catfish): 128507217
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Entry
128507217 CDS
T10780
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128507217 (pus1)
Enzymes [BR:
cgar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
128507217 (pus1)
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
128507217 (pus1)
Prokaryotic type
128507217 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
128507217
NCBI-ProteinID:
XP_053333908
LinkDB
All DBs
Position
19:complement(23933239..23937317)
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AA seq
425 aa
AA seq
DB search
MLKFCQLVSFLGSQRLKSAVKPKGWCRIERFCGLCVQARKMSEEENQNHSNMTKLKRAGE
GTEVGEREAKKLKTDEEDKTDEEKRFPKRKVVLLMAYSGKGYYGMQRNPGNSQFKTIEDE
LVTALIKAGCIPENHGDDMKKMSFQRCARTDKGVSAAGQVVSLKLWLIENILEKINTHLP
PQIRVLGFKRVTGGFNSKNNCDARTYSYMLPTIAFSQKDTDQNDTSFRLDTETLQMVNKL
FALYKGTHNFHNFTSQKGPRDPSAKRYITHMSCGEPFVRQGAEFAVITVRGQSFMMHQIR
KMIGLVIAVVKGYAKEEIIERSWGEEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHET
LEWNQEEDAIAAFKEAHIYPSIVETESQEKSMINWMSTLPIHDFTATATGKQERKDEDED
GNASD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaattctgccagctcgtcagctttttaggcagtcagcgtttgaagtcagctgtt
aaacccaaaggttggtgcaggattgaaaggttttgtggactttgtgtacaggccagaaag
atgtctgaggaagagaatcagaatcacagcaacatgaccaagctgaaacgagctggagaa
ggcactgaggtgggagagagagaggctaaaaagctgaaaactgacgaggaggacaagact
gatgaggagaaaaggttcccgaaaagaaaagttgtcctccttatggcatattctggaaaa
ggatactatggaatgcagaggaatcctggaaattcccagtttaaaaccattgaagatgaa
ctggtcaccgcgctcatcaaagctgggtgtattcctgaaaatcatggagacgatatgaag
aaaatgtcttttcagagatgtgccaggaccgacaaaggtgtttctgcagctggccaggtt
gtgtctctaaagctgtggctaattgagaacattctagaaaagatcaacacccaccttcca
ccacagattagagttttaggtttcaaaagagtcacaggcggctttaactccaaaaacaat
tgcgatgccaggacctactcctacatgcttcccactattgcattctctcaaaaggacact
gaccagaatgacacgtccttccgcttagacacagagacactccaaatggttaacaagctc
tttgctctttacaaaggcacccataattttcacaactttacatcacagaagggccctcgg
gacccgagcgctaaacgctatatcacgcatatgtcatgtggagaaccgttcgtcagacag
ggagcggagtttgccgtgatcaccgtacgaggccagagcttcatgatgcaccagatccgg
aaaatgatcggattagtgatcgctgtagtgaagggatacgctaaagaggagatcattgaa
aggagctggggtgaagagaaggtcgatgtgcccaaggctcctgggctcggcctggtgctg
gagcgtgtgcactttgacaggtacaacaagcgtttcggaggagatgggcttcatgagacc
ctggagtggaatcaagaagaggatgcaatagctgcttttaaggaagctcatatttaccca
agtatagtggagacggagagtcaggagaagtccatgatcaactggatgagtacgttgccc
attcatgacttcaccgcaacggcaaccggcaagcaagaacgcaaggatgaagatgaagat
ggaaacgcgtcagattga
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