Clarias gariepinus (North African catfish): 128507253
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Entry
128507253 CDS
T10780
Symbol
pold3
Name
(RefSeq) DNA polymerase delta subunit 3
KO
K03504
DNA polymerase delta subunit 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03030
DNA replication
cgar03410
Base excision repair
cgar03420
Nucleotide excision repair
cgar03430
Mismatch repair
cgar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128507253 (pold3)
03410 Base excision repair
128507253 (pold3)
03420 Nucleotide excision repair
128507253 (pold3)
03430 Mismatch repair
128507253 (pold3)
03440 Homologous recombination
128507253 (pold3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128507253 (pold3)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgar03032
]
128507253 (pold3)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128507253 (pold3)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128507253 (pold3)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
128507253 (pold3)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
128507253 (pold3)
MMR (mismatch excision repair)
DNA polymerase delta complex
128507253 (pold3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
CATSPERE_NTD2
Motif
Other DBs
NCBI-GeneID:
128507253
NCBI-ProteinID:
XP_053333967
LinkDB
All DBs
Position
19:complement(12132035..12144307)
Genome browser
AA seq
454 aa
AA seq
DB search
MDDLYLDNIDEFVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYIEQRRKERSGSTLHATY
LVSGKCLENGSMCHKVSVVREDKLEDVKSKLDVTVSVHVYSVQKAELKDSAPLYSTDYDA
MKENLKNCNKYSAIRCSAAIQKSTSELQRAQEKVVSAPTEASKPVVNNTAPASKPTSKQA
KGIMGMFASKPAPKSEEQSKEVKMEQVDVPAEGPKSKVSSKANTMSNFFGKSAEKKLDKA
DKNIKVKADGGEPPSSAATTGSKKESCSSSKSKQDVKDESPNEAQVIQNDFKETRSKTKR
LENSEDEQVEGQKKKRRRIKKPQPDSSDDEVIPDSPPAPELQTPSPEKHVKKEPGSQSSE
GSRRKRRRVLKSHTFVDDEGCIVTEKGYESESYSENEAEPKAATQPSEDSSSLKQSLARM
DEEKRVKEKSQKKAPAATSKLTKQASIMGFFQKK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctttatttagacaacattgacgaatttgttaacgatcagaataaaattgtc
acctataaatggctgagtcttacacttggtgtccatgttaacacggctaaacaaatgctg
tatcactacatagagcagcgacggaaggaaaggtctggaagcactctgcatgcaacttac
ttggtgtctgggaagtgcttggaaaacggcagcatgtgtcataaggtatcggtagtccgt
gaagacaagcttgaagatgtaaaatccaaactggatgtgacagttagtgtgcatgtgtac
agcgtgcagaaagctgagctgaaggacagcgctcccctttacagtactgactacgatgct
atgaaagagaaccttaaaaactgcaacaagtatagtgcgattcgatgttctgctgcaatc
cagaagtcaacatcagagttacaaagggctcaggaaaaggttgtgtctgctcctactgag
gccagtaaacctgtcgtcaacaacacagcacctgcatccaaacccacttccaaacaggcg
aaaggcatcatgggaatgtttgcaagtaaaccagctcctaaaagtgaagaacagagcaag
gaggtgaaaatggagcaggtagatgttcctgctgagggacccaaatccaaggtgtcttcc
aaagctaacactatgagcaatttctttgggaaatcagcagagaaaaagcttgataaagca
gacaaaaacataaaagtaaaggcagatgggggtgaaccaccatcatcagcagcaaccaca
gggagcaaaaaagagtcttgctcttcatccaaatctaagcaagacgtaaaagatgaatcg
ccaaacgaggctcaagtgattcaaaatgacttcaaagagacccgaagtaaaacaaagcgt
ctggagaatagtgaagacgaacaagtggagggtcagaagaaaaagagaaggaggataaaa
aaacctcagcctgacagtagtgatgacgaagtaattccagattctcctcctgcacctgaa
ttacagacaccaagccctgaaaagcatgtaaagaaggagcctggttcacaaagctctgag
ggtagtaggaggaagaggagacgggtactgaaatcccacacatttgttgatgatgaaggc
tgcatcgtgacagaaaaaggctacgagagtgagtcttactctgaaaatgaagctgaaccc
aaggcagccactcagccctctgaggattcaagctcactgaagcagtcacttgcaaggatg
gacgaggagaaaagggtcaaagagaaaagtcaaaagaaggctcctgctgctacgagtaaa
ctgacaaaacaagcttcaatcatgggctttttccaaaagaaatga
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