Clarias gariepinus (North African catfish): 128507310
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Entry
128507310 CDS
T10780
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128507310 (cacna1bb)
04020 Calcium signaling pathway
128507310 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128507310 (cacna1bb)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128507310 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
128507310
NCBI-ProteinID:
XP_053334060
LinkDB
All DBs
Position
19:complement(23639045..23783840)
Genome browser
AA seq
2312 aa
AA seq
DB search
MARFGDEASGRYGAAPGAGRGGGGGGGGGGGGARPGGAPGAPRLYKQSMAQRARTMALYN
PKQTKQNCFTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPE
DDKTPMSERLDDTEHYFIGIFCFEAGIKIIALGFVFHKDSYLRNGWNVMDFVVVLTGILA
KVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAII
GVELYMGKFQQTCFKNGTEEVAADFPCGSRECPNDTECRSGKAWKGPNYGITNFDNILFA
ILTVFQCITMEGWTDVLYHTNDAVGSMWNWMYFIPLIIIGSFFMLNLVLGVLSGEFAKER
ERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDENAEEKSPLDGAWYKRKQN
NPVLKRAKVKKGKNDLIGAEESEEHFTDISSVAPPGSPFARASLKSSKNDSSSYFRRKEK
RVRFFIRRMVKAQSFYWIVLCIVGLNTLCVAIVHYDQPEGLTQALYLAEFVFLCLFLTEM
TLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVVWAAIQPGASFGISVLRALRLLRIFKVT
KYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDNETPTTNFDNF
PAAIMTVFQILTGEDWNAVMYHGIESQHGVPFGMFFSIYFIILTLFGNYTLLNVFLAIAV
DNLANAQELTKDEEEQEEAAKKSMALQKAMEVKEVSPMSAANISIAAFVKQNRDVLSRSS
SVSSVHSLKEQQRSLQKKSIWEQRTTQLRHHNLRNSSEALYNELEPEDQMRMSSGLHLRP
DMKMHHDRPLTVEKSQPPEGRDNPEEAPPHKHHRCRGENGEAGEGRRHRHHRAGEHREQQ
DKGPRNKTENGDDDREHHHYHSHRSRESDGDGSNGARGERLQRGHKEGEAGNGERRRRRP
RVKAQTTLDQEESRENKERDTPSHRDRLMDTEGDGLSSSSVPSPTERQEDSDNLKNSTKA
RSTAVSIPVTITAPPGETTVIPMNNIDGESLLLNDEKKDLDELNQNAPKPILPYSSMFVF
GQSNPVRRLCHYVVNLRYFEMCILMVITMSSIALAAEDPVNAAAFRNNVLKYLDYIFTGV
FTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSSFMGSQQSVTRGTKGK
DINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQ
LFKGKFFYCTDESKALEKDCRGQFLDYDGDKVEAKARVWKKYDFHYDNVLWAFLTLFTVS
TGEGWPMVLKHSVDATYEDQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQ
GDKAMSECSLEKNERACIDFAINAKPLTRYMPQDKQSFQYKMWKFVVSTPFEYSILAMIA
VNTVVLMMKFSTASKPYEDMLKWLNIIFTALFTLECILKIIAFGLLNYLKEAWNIFDFVT
VLGSITDILVTEIKTQNKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYV
CLLIAMLFFIYAIIGMQVFGNIELNDESAINQHNNFQTFLQALMLLFRSATGEGWHEIML
SCLGGKRCDQRSGSNDNSCGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASI
LGPHHLDEFIRVWADYDPAACGRISYLDMYEMLRHMSPPLGLGKKCPSRVAYKRLVRMNM
PIAEDNTVHFTSTLMALIRTALDIKLASGVLAQRLCDADLRREIGKVWPSLSTKTVDLLV
TPHKHNELTVGKVYAALMIFDYYKQNRAKRLQEQQPTSGTLSKMGSLFKPMLPLTHIHEQ
EQPMKSSKIPPSDSYPYSEFPPTTTRLTNGEPVKSTSMKISSSADTLGMSRNSVYSEDVQ
KTESQELVEMTDTENNSDVGGFSTLEGHGRAASMPRLSAGFQRTQLRHTTGIYLAPILDS
SPMRRSASSLASQRGGTELNLKEYALERPAAAQTQEKERDRLHQHHHHHHHHRCQRRRDK
KHKSLDRAISEEQPGTVGTVVDLSIEPQDRARDRERDRGRSHERKQHSSSATDRKQRYYS
CDRYGNREHCHSRSPGPSRSTSPADQHESNRFKMGVNSTKGSPGVFTSGCSTPSRGRRQL
PQTPLTPRPAVSFKSTSSSTLQTAATRSSVPIPTYLSRGQSEHDALLGITHQASPVPVTR
IGSDPNIGPLQHDPHLSEAEDFHDALSTYGSGRFPRTVSATHSSIAAVPSMVQQSRSGVP
NGYHFTLGVSASLGSSVRISPSYHDTEKDDWC
NT seq
6939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctttggggatgaggcgtctgggcgctatggagccgctccgggcgcggggaga
ggaggtggtggtggaggtggaggaggaggtggaggcgcgcggccgggaggcgcaccgggc
gctccgaggctctacaagcagtcgatggctcagagagcccgcaccatggctctgtataac
ccgaagcagaccaagcagaactgctttaccgtcaaccgctcgctgttcattttcagcgaa
gacaacgtgatccggaaatatgccaagaggatcaccgagtggcctccatttgaatacatg
atccttgcaaccatcatcgccaattgtattgtactggcactggaacaacatctgccagaa
gatgacaagacgcccatgtcagaacgcctggatgacacagagcactactttatcgggata
ttctgtttcgaggctggcattaagatcatcgccctgggctttgtctttcacaaagactcc
taccttcgcaacggctggaatgtaatggacttcgtggttgtcctcactgggattttggcc
aaggtgggttcagattttgacctgaggacactgagggccgtgcgagtgctgagacctctc
aagctggtgtcaggaattcctagtctacaggtggtgttgaagtccataatgaaggccatg
gttcctttgctgcagattggcctgctgctcttctttgccattgtcatgttcgccatcata
ggagtggagctctacatgggcaagtttcagcagacctgcttcaaaaatgggacagaggag
gtggcagcagatttcccatgtggatccagggagtgtcccaatgacactgagtgtaggtcc
ggcaaagcgtggaaaggaccgaactacggaatcactaactttgacaacatcttgttcgcc
atacttactgtcttccagtgcatcaccatggaaggatggaccgatgtcctttaccatacc
aatgacgccgtgggcagcatgtggaactggatgtacttcatcccccttatcatcattggc
tccttcttcatgctcaatctggttctgggtgtcttatcaggagaatttgctaaagaaaga
gagcgtgtggagaagagacaggagtttctgaagctacgcaggcagcaacaaattgagaga
gagttgactggctacctggagtggatctgtaaggcagaggaggtactgctggctgaggaa
gatgagaatgcagaagagaaatctccactggatggagcgtggtacaagaggaaacagaac
aacccagtactaaaaagagccaaggtcaagaagggtaagaacgacctcatcggtgctgag
gagagtgaggaacacttcacagacatttcctcagttgcgccccctggatctccctttgcc
cgagccagcttgaaaagcagcaagaatgacagctcgtcatatttccgacgcaaagagaaa
cgtgtgcgcttcttcatccgccgcatggtgaaagcacaaagcttctactggattgtgctg
tgcatagtgggattgaacacattgtgtgtggccattgtacactacgatcagcctgagggg
ctcacccaagcactttacctggccgagtttgtgttcctgtgtctatttctaactgagatg
actctcaagatgtacggcctggggcccaggaactacttccattcctcattcaactgcttt
gactttggggtcatcgtggggagtatatttgaggtggtgtgggcagccatccaacctgga
gcctctttcggtattagcgtcttgagggctttgcgtttgctccgaatattcaaagtgacc
aagtattggaactctttgaggaatctggtggtgtcgttgctcaactcaatgaaatccatc
atcagcttgctcttcctcctcttcctcttcattgtggtttttgccttgctggggatgcag
ctctttggaggacagtttaattttgataacgaaacgccaactacgaatttcgacaacttc
cctgctgccataatgactgtcttccagattttgacaggagaagactggaatgcagtgatg
tatcatgggattgagtctcagcacggtgtcccatttgggatgttcttctccatttacttt
atcatcctaactctctttggaaactacactcttcttaatgtgttcttggctatcgctgtc
gataaccttgccaatgctcaggagctgacgaaggatgaggaggagcaagaggaagcggcc
aaaaagagcatggcactgcagaaggccatggaggtcaaggaagtcagcccgatgtcagca
gctaacatttccatcgcagcttttgtaaagcaaaatcgagatgtgctctctcgcagctct
tccgtcagcagcgttcactcactcaaggagcaacagcgctctctacagaagaaatccatc
tgggagcagcgcactacccaactacgtcaccacaacctgcgcaacagcagcgaagcgctt
tacaacgagctggagcctgaggaccagatgcgaatgtcatcagggctccatctgcgccct
gacatgaagatgcaccatgatcggcccttgaccgtagagaaatcgcaacctccagagggc
agggacaatccagaggaggcacctcctcacaaacatcaccggtgtcgcggagagaatggt
gaggctggagaaggacgccgccatcggcaccaccgcgccggtgaacacagagagcagcag
gataaaggacccaggaacaagacagagaatggggatgatgatagggagcaccatcactac
cattctcaccggtccagagagtcagatggtgatggcagtaatggagcgagaggagaacga
cttcagagagggcacaaagagggtgaagcagggaatggtgagaggaggagacgtaggcct
cgcgtcaaagcccaaaccacgcttgaccaggaggagagccgggaaaacaaagagagagat
acaccaagccacagggacaggcttatggatacagagggtgatggtttgagttcgagttct
gtgccatctcctactgagagacaagaggactcagataacctaaaaaacagcacgaaggcg
agatcaactgcagtcagcatccctgttaccattactgctccaccgggagagaccaccgtt
attcccatgaataatatagatggtgagagcctgctcctaaatgatgaaaagaaggacctg
gatgagctgaatcagaatgctcctaaacccatcttaccgtacagctccatgtttgtgttt
ggtcagtccaaccctgtacgaaggttgtgtcactatgtggtgaacttgcgctactttgag
atgtgcattctcatggtgatcaccatgagcagtatcgcactcgctgcagaagaccctgtg
aatgctgctgcttttcggaataacgtgctgaaatatttagattacatcttcactggcgtg
ttcacatttgaaatggtgataaagatgattgacctcggactgcttctccaccctggctcc
tacttcagagacctgtggaatattctagacttcattgtggtcagcggtgccctggtggct
tttgcctgctcgagcttcatgggatcacaacaaagcgtaaccagaggaaccaaaggcaag
gacatcaacaccatcaagtccctcagggttctccgtgtgctccggcctctcaagaccatc
aaacggctgcctaaactcaaggcggtgtttgattgcgtggtgaactcactgaagaacgtg
ctcaacatcctcatcgtctacatcctcttcatgttcatcttcgctgttatcgccgtgcag
ctcttcaaaggaaagttcttctactgcacagacgaatccaaagctcttgaaaaggactgc
aggggtcagtttttggattacgatggagataaggtggaagccaaggcgcgtgtatggaag
aagtatgattttcactacgataacgtgctgtgggctttcctcacgctcttcaccgtttct
acaggagagggttggcctatggtgctgaaacactcggtagacgccacttatgaagaccaa
ggtccaagcccaggctaccgcatggagatgtccattttttatgtggtttactttgtggtc
ttcccatttttcttcgtcaacattttcgtagctttgatcatcatcacgttccaggagcaa
ggggacaaagccatgtctgagtgcagcttggagaagaatgagagggcgtgcattgacttt
gccattaatgccaaacccctgactcgctacatgccccaggataagcagtccttccagtac
aagatgtggaagttcgtggtttcaacaccgtttgaatattccatcctggcgatgattgcc
gtcaatacggtggttctcatgatgaagttcagtaccgcttcgaagccttatgaggacatg
ctgaagtggctgaacattattttcactgccctcttcaccctggaatgtatcctgaagatc
atcgcttttggtctgctgaactatctaaaggaagcctggaacatatttgactttgtaact
gtactgggcagcatcactgacatcctggtcactgaaataaagacgcagaacaagctgatc
aacttaagctttctgaggctgtttcgagctgctcgactcatcaagcttctgagacagggc
tacaccatccggattctgctctggacctttgttcagtcttttaaggcactgccctatgtg
tgtctgctcattgccatgctcttctttatatacgccatcattggaatgcaggtatttgga
aacattgagttaaacgatgaatcagcaatcaaccaacacaacaacttccagaccttcctt
caggcgctcatgctactcttcaggagtgccacgggcgaggggtggcatgagattatgctg
tcgtgtttgggtggcaagagatgtgaccagcgctcgggttccaatgacaatagttgtggc
agcgatttcgcctacttctatttcgtttccttcatcttcctctgctcgttcctgatgctg
aatttgtttgtggctgtcatcatggacaatttcgagtacttgacacgagatgcctccatc
ctcggacctcaccatctggatgagttcatccgtgtctgggcagattatgaccctgccgcc
tgtgggcgcatatcctacctcgatatgtacgaaatgctacgtcacatgtcccctccgcta
ggtttgggaaagaaatgtccatcgcgagttgcctacaagcgcttggtgaggatgaacatg
cccattgctgaagacaacacagtccactttacatccacgctgatggctctcatacgcacc
gctctggatatcaaactggcatcaggtgttcttgctcagcgtctctgtgatgctgactta
aggagggagattggtaaagtgtggcccagcctgtcgacaaaaactgtggacttgctggta
acaccacacaaacataacgagttaacagtcgggaaagtgtacgctgcgcttatgatcttt
gattactacaagcagaaccgggccaaaagactccaggaacagcagcccacttcaggaaca
ctgagtaaaatggggtctctcttcaagcccatgttgcccctcacccatatacatgaacaa
gagcaaccaatgaagagttccaaaataccaccttctgattcatatccatattcagagttc
ccgcccacaaccactcgcttgaccaatggagagccagtaaaaagcactagcatgaagatt
tcttcttcagctgatacgcttgggatgagcaggaattctgtctattcagaagatgtgcaa
aaaactgaatctcaggaattagtagagatgacggatacagagaataattctgatgtaggg
ggcttctccacactggagggccacgggagggcagcttcaatgcccagacttagtgcaggc
ttccagcggacccagttgcgccacaccaccgggatataccttgcacccatcttggacagc
agtcccatgcggcgctcagcctcctctttggcctctcagagaggagggacagagttgaat
ttgaaggaatacgcattggagcgtcctgcagcagcacaaacgcaggagaaagaaagagac
aggttgcaccaacatcatcatcatcatcaccatcatcgatgtcagcgccgtagggacaag
aagcataaatccctggatcgagctatcagtgaggaacaacctggcactgtgggtacagtg
gtggatctgagcattgagccacaggatcgagcacgtgacagagagagagaccgaggtcgt
tctcacgagaggaaacagcattcatcttcggccaccgacagaaagcagcgttactactct
tgtgatcgctatggaaacagagagcactgtcacagccgatcacctgggccaagcagatct
acttcaccggcagatcaacacgaatccaacagattcaaaatgggtgttaactcaactaag
ggcagcccgggggtcttcacctcaggctgcagtacgcctagtcgtggaaggagacaactg
cctcagactcccctcaccccaaggcctgcagtgtcctttaagtctaccagctcttccaca
ctacagacggctgccacccgctcgtccgtcccgatccccacctacctgagccgaggtcag
tctgagcacgacgcgctgctcggcatcacccaccaagcatctcctgtgcctgttacgcgg
atcggatctgaccccaacattggccccctgcagcatgacccccacctgtcagaggcagaa
gatttccacgatgcattgagcacttacggctcaggacgttttccaaggacggtctctgcc
acccattcgtccatcgcggcagtaccgtccatggtccagcagagtcgaagtggagtgccc
aatggttaccacttcaccctgggagttagtgcatctcttggctcaagtgtcaggatttcc
ccaagctatcatgatacagagaaggatgactggtgctga
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integrated database retrieval system
