Clarias gariepinus (North African catfish): 128507386
Help
Entry
128507386 CDS
T10780
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128507386 (exd1)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128507386 (exd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Herpes_UL69
Motif
Other DBs
NCBI-GeneID:
128507386
NCBI-ProteinID:
XP_053334222
LinkDB
All DBs
Position
19:13214898..13216901
Genome browser
AA seq
473 aa
AA seq
DB search
MMSFDDYQFLDSFKGKRIRLTTKLCTFEGVVQRINLNKTVVLEDVVEVQRGVQLRGAKLF
FGYEILNIEFASTPNEEQTADKDHDKVGKLSLAEFQPYRNLLLSDEGDDDDDDEERSVNY
LVVDEFHEKFGPAVMHIREQQVIGLGLDGVGAFQNERLCWLQVATKNKVYLFDILLLGAR
AFKNGLFNILESRSILKVMHDCRRISKCLMTQFGVNLMNVFDTQVADVMHFNTETGGFLP
ARVSTLQEIVNVHLKMPLSRLSSLRIKEQLCKEDREVWYIRPCPASLIKVMALSVIHLLP
LRLALLDALMSDYTSLVDSYLKTGQEDPVCTEDIGKTSLELPEELRKIELIKHERQKWAL
EHYNITKEGFLDRYSVKQTSEPSSEIKERSSEILDSSLDARKTFSCPADKSNLGGGIVQD
KKTTMMPSLGRGLILPSPVAPFRNSTVEMGPLSIMRGVAQTAACSMPVMGRGL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttttgacgactaccagtttttagatagctttaaagggaaacgtatccggctc
acaacaaaattgtgcacatttgagggcgttgtgcagcgcattaatttgaataaaaccgtc
gttttggaggacgtggttgaggttcagaggggcgtccagctgcgcggtgctaagctcttc
ttcggatacgaaatcctgaatattgagtttgcttccacacctaacgaagaacaaactgcc
gacaaggatcatgacaaggtgggcaagctgagtctggctgagttccagccctacaggaac
ctgctgctaagtgatgaaggtgatgatgatgatgatgatgaagagaggtctgtgaactac
ctggttgtagatgagttccatgagaagtttggtcctgcagtgatgcacatccgggagcag
caggtgatcgggttgggattggacggagttggtgctttccaaaacgagagactctgctgg
ctccaggtagctaccaaaaacaaggtttaccttttcgacattttgttgctcggagctcga
gcttttaaaaatggtttattcaacattctggagagcaggagcatcctgaaggtcatgcat
gactgccggaggatctccaagtgtctgatgacacagttcggtgtgaacctgatgaacgtg
tttgacacacaggtcgcagatgtgatgcacttcaacacagagactgggggcttcctgccc
gcacgggtgagcacgctccaagagatcgtcaacgtgcacttaaaaatgcctttgtcccgt
ctgtcgtctttacgcatcaaagaacaactatgtaaggaagatagagaagtctggtacatc
cgtccatgccctgcttcgctcataaaagtcatggctctgtctgtgatccacctgctgcca
cttcgtcttgcacttttagatgctctgatgtctgactacaccagtctggtggattcttat
ctcaagaccggccaggaagatcccgtatgcacagaggacatcggcaagactagcctggag
ctccccgaggagctgcgtaagattgagcttatcaaacatgagagacagaaatgggccttg
gagcactataacataaccaaggaaggatttctggaccgctacagcgtcaagcagacttca
gaaccaagctcagagattaaggaaagatctagtgagatactggattccagcctcgatgct
agaaaaacgttttcctgtccagctgacaagtctaacctaggaggaggaattgtacaagat
aaaaagactactatgatgccaagtttaggaaggggacttatacttccttccccagtagca
ccatttcggaatagcactgtagagatgggtcccctctctattatgaggggcgtagctcaa
actgctgcctgttctatgccagttatggggagagggctctaa
DBGET
integrated database retrieval system
