Clarias gariepinus (North African catfish): 128507407
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Entry
128507407 CDS
T10780
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128507407 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128507407 (cadm1a)
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
Nectin family
128507407 (cadm1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
C1-set
C2-set_3
DUF3439
Syndecan
Motif
Other DBs
NCBI-GeneID:
128507407
NCBI-ProteinID:
XP_053334264
LinkDB
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Position
19:complement(9870070..10216173)
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AA seq
440 aa
AA seq
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MANAASGALASLLLLSTIAAAVLQGAAQYPVQSQNLVTDNISVVEGETATISCRVKNNDD
SVIQLLNPNRQTIFFRDVRPLKDSRFQLVNFSDNELRVALSNVSLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIESREEIVSEGNETEMTCTAMGSKPAASIRWMKGDKELQGRSK
AEATDDRMYTVTSSVRLTVTKEDDGVPVVCIVDHPAVKDFQAQKYLEVQYKPEVKIVVGF
PQGLTREGENLELMCKTKGKPEPQQVNWVKVDDDVPSHAVITGSDLYIENLNKSYNGTYR
CVASNSVGESYDDYILYVYDAPTTTPIPTTATTTMYTTTSLPGITQDAAPSTEPAAHVDS
RAGAGAQRAVDHAVIGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADT
AIINAEGGHNNSDEKKEYYI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcggccagcggagctctcgcaagtctcctgcttttatcaacgattgcggca
gctgttcttcaaggagcagctcagtatccagtccaaagccagaacctggtgacagacaac
atctcggtggtggagggggagacggccactatcagctgtcgagtcaaaaataatgatgac
tccgtcatccagctcctgaaccccaacagacagaccatcttctttagagatgtcagaccc
ttgaaggactctcgctttcagctggtcaacttctcagacaacgagctgcgcgtggccctg
tccaacgtgtctctctcggatgagggcagatacgtgtgtcagctctacacggaccctccg
caggaggcctacgccgacatcactgtgctgatcccaccaggcaacccaatcatcgagtca
cgtgaggaaattgtaagcgagggcaatgagacggagatgacctgcacagctatgggcagc
aaaccagccgcctccatcagatggatgaaaggagacaaagagctgcaaggaaggtccaaa
gcagaggccacagatgacaggatgtacactgtaaccagctcggtaaggctcactgttaca
aaggaggacgatggtgttcctgttgtctgcattgtagaccacccagcagtcaaggacttt
caagcccagaaatacctggaggtgcagtataaaccagaagtgaagattgtcgtggggttt
cctcaaggactgaccagagagggggaaaacctggagctgatgtgcaagaccaaaggcaaa
ccagagcctcagcaggtgaactgggtgaaggtggatgacgacgtgccctctcatgccgtc
atcaccggctcggacctctacatcgagaaccttaacaagtcctacaacggtacttaccga
tgcgtggcctcgaactcagtgggagaatcctacgacgattacatcctctacgtgtacgat
gcccccaccaccacccctatacccactacagccaccaccaccatgtataccaccacctct
ctccctggtatcacccaagacgctgcgcccagcactgaacccgctgctcacgtagactcc
agagcaggagcaggagctcaaagagcggtggatcacgccgtcatcggtggagtggtggcg
gtcgtggtcttcgccatgctttgtcttcttatcattttgggccgatacttcgcaagacac
aaaggtacctacttcacacatgaagcgaaaggggcagacgacgcagccgatgccgacacg
gccatcatcaacgctgaaggcggacacaacaactcggatgaaaagaaggaatactatatc
tga
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