Clarias gariepinus (North African catfish): 128507437
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Entry
128507437 CDS
T10780
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128507437 (bbs1)
Cilium and associated proteins [BR:
cgar03037
]
Primary cilia and associated proteins
BBSome
128507437 (bbs1)
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Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
PHTB1_N
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
128507437
NCBI-ProteinID:
XP_053334332
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All DBs
Position
19:6566081..6573038
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AA seq
616 aa
AA seq
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MLVTVYCIRDSTFLETPTAQLAVKMKASMSSGPMEMKDSAMSSSKWLDAHYDPVANLYTF
SSCITLADLHGDGENKLVVGDLGTGVCNMKLKVYRGTGLLSENTLLDLPTGLVSFLMDQH
EPRTPAIAVASGPFIYIYKNLRPYFKFTLPTLEVNPLEQDVWNQARGDMIDPMTLKEMLE
SIRDKADIPLTVRSLRFLMLEPQEMESYVNLHKDQPIRRQTVITCIGTLKKNMADDDAVS
CLVIGTESQEVYILDPEAFTILSKMSLPSVPTLMDVTGQYDIEFRIIVACRNGNIYILRR
DSQKPKYCIELSSHPVGLVRMGKNVVVGCAQETMQSFTQKGKKLWTTYLPAPVTTMALLD
LPTRGFQAMLVALANCEVHVYRDKNVVSTIKTPDVVTSICFGRYGREDGTLIMTTKGGGL
IIKILKRTAVFDDRDSISGPPLAQSIRLNVPKKTKLYVDQTMRERENAVAMHRAFQMDLS
RLRLAAARAYVKALESSMTPISASLTEPLKMNAVVQGLGPSFKLTLNIQNTASCRPVMNL
AVSFLYDEKLYSMRTAFFKIPLLVPGLNYPIDTFVECLSDKGISDIIKVFVLREGKSTPL
LTAHINMPVSEGLALS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgctggttactgtatattgtattagagacagcacctttttggaaactcctacagcacag
ctagcggttaaaatgaaagctagcatgtcgtcaggtcccatggagatgaaagacagtgcc
atgtccagttccaaatggcttgatgcacactatgatccggttgccaatttatacactttt
tcttcatgcatcactctggcagacctgcatggagatggtgagaacaagctggtggtgggt
gatctgggcacaggagtatgcaacatgaagctgaaggtgtatcgtggcactgggctgctc
agtgagaatactctgctggacttacccaccggtctggtgtctttcctcatggaccaacat
gagcctcgtaccccagctatcgctgtagcctcgggccccttcatctacatctacaagaac
ctgcggccctatttcaagttcacgctgcccaccctggaagtcaaccctctggagcaggat
gtgtggaatcaggccagaggggatatgattgacccaatgaccctgaaagaaatgttagag
agtataagagataaggctgatatccccctaacagtcagatcattacggtttctcatgctt
gaacctcaggaaatggagtcttatgttaacctccacaaagaccagcccatacgcagacag
acggtgattacgtgcatagggacactgaagaagaacatggcggatgatgatgcagtcagc
tgtctggttatcggcaccgaaagccaagaagtttatattctggaccctgaagctttcacc
attctttcaaagatgtcccttcccagtgtccctacactcatggatgtgactggtcagtac
gacatagagttcagaatcattgtagcctgtcgcaatgggaacatctatatattgcgcagg
gactcgcagaagcccaagtattgtattgagctatcgtctcatccagttgggctggtcagg
atgggaaagaatgtggtggtgggctgcgctcaggagactatgcagagtttcactcagaag
gggaagaagctgtggacgacttacctgcctgctccagtcaccactatggcccttctggac
ctgcccacacggggcttccaggccatgctggtggccctggccaactgtgaggtccatgtg
taccgggacaagaatgttgtcagcaccatcaaaacaccggacgtggtgaccagcatttgt
tttggccgttatggtcgtgaagacggcactcttataatgactaccaaaggagggggtctc
atcattaagatcctgaagaggacagctgtatttgatgacagagactccatttctggtcct
ccgttagcccagagcatccgacttaatgtgcccaagaaaaccaagctttatgtggaccag
accatgagagaaagagagaatgctgtggctatgcacagagccttccaaatggacctgagc
aggctgcgactagctgcagccagggcctatgtcaaagcacttgagtccagcatgactcct
atctcagccagcctgacggaacctctaaagatgaatgcagtggttcaaggcttaggccca
tcatttaaactaactctgaacatccagaacacagcatcatgccggcctgtaatgaacctc
gccgttagtttcctttacgatgagaaattgtacagcatgaggacagctttttttaagatc
cccctactagttccagggctgaattaccccattgacaccttcgtggagtgtctgagtgat
aaagggatttcagacatcatcaaagtgtttgtgttgagagaagggaagagcaccccgctc
ctcaccgcacacattaacatgcctgtgagtgaaggactggcactcagctag
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