Clarias gariepinus (North African catfish): 128507445
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Entry
128507445 CDS
T10780
Symbol
rars1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128507445 (rars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgar01007
]
128507445 (rars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128507445 (rars1)
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128507445 (rars1)
Enzymes [BR:
cgar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
128507445 (rars1)
Amino acid related enzymes [BR:
cgar01007
]
Aminoacyl-tRNA synthetase
Class I (G)
128507445 (rars1)
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
128507445 (rars1)
Prokaryotic type
Other AARSs
128507445 (rars1)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
128507445 (rars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
tRNA-synt_1
HPD
tRNA-synt_1g
LisH_TPL
BAR_3
YabA
Motif
Other DBs
NCBI-GeneID:
128507445
NCBI-ProteinID:
XP_053334345
LinkDB
All DBs
Position
19:1149252..1166778
Genome browser
AA seq
658 aa
AA seq
DB search
MGDPVAEYTTRLQNQEKEIECLRAVVESLKKETGFTSPALEELREENTRLKYRLNILKRS
IQENGCSSKSMTNINQRLQEIFGRAISVAYPDLEDPPLSVAPNQQPKFGDYQCNSAMAMS
QMMKGRGLKVSPREIAEKITQNIPDNELIERTEIAGPGFINIHLKKSFVSKLLTNLLLSG
VQPPALNKKKRVIIDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEYLGHDVLRLNHVGDWG
TQFGMLIAHLQDKFPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKKRAYQCVVRLQSKEP
DFIKAWNLICDVSRKEFQRVYDCLGIRILERGESYYQDMMTEVVKEFEDEGLVQMDEGRK
IVFPPDQTIPLTVVKSDGGYTYDTSDLAAIRQRLFDEKADIIIYVTDSGQAMHFQVVFSA
ARLIGWYDPNVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKEKER
DKVLTPEELIKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTRIR
SIARLANIEEAALRKAAETCEIVLEHEKEWKLGKCILRFPEILQKILDDLLLHTLCDYLY
ELATTFTEFYDSCYCVEKDRQTGEVVKVNMWRMLLCEATAAVMAKSFDILGLTPVQRM
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaccctgtggcagagtacactacccggctccaaaaccaggagaaggagatcgag
tgtctccgggccgtggtggagagtctgaagaaagagacggggttcacgtcgccggcgctg
gaggagctcagggaggagaacaccaggctgaaatatcgtctcaacatcctcaaaaggagt
atacaagagaacggctgcagcagcaagagcatgaccaacatcaaccagagacttcaggag
atctttgggcgtgccatcagcgtggcgtaccccgacctggaggacccgccgctctccgtc
gcgcccaaccagcagcccaagtttggagattaccagtgcaatagtgccatggccatgtct
cagatgatgaagggaagaggtttgaaggtcagccccagggagatcgccgagaagattacg
caaaacattccagacaacgaactcatcgagagaacggaaatcgccggaccaggtttcatt
aacattcatctcaagaagtcgttcgtgtccaagctgctcaccaacctgcttctgagcggc
gtgcagcctccggcgctcaacaagaaaaagagggtaattatcgacttctcttctccaaac
atcgcaaaggagatgcacgtcggtcacttgcgctccaccatcatcggggacagcatgtgt
cgtctcttcgagtatttaggccatgatgtcttaaggttaaaccatgtgggcgattggggc
acgcagttcgggatgctcatcgctcacttacaggacaagttcccgaattacctgagtgtt
tccccgcccatcggagaccttcaggctttttacaaagagtctaagaagcgcttcgatgaa
gacgaggagtttaagaagagagcgtatcagtgcgtcgtcaggctgcagagcaaagagccg
gacttcatcaaggcttggaatctgatctgtgacgtgtctcggaaagagttccagagggtc
tacgactgcctgggcatccgtattttggagcgcggggagtcgtactaccaggatatgatg
acggaagtggtgaaggagtttgaggatgaaggcctggtgcagatggacgagggcaggaag
atcgtattcccccctgatcagaccatccctttgacggtggtgaagtcggacggcgggtac
acgtacgacacgtcggacctcgccgcgatacgtcagcgcctcttcgacgagaaggctgac
atcatcatatacgtcacagacagcggacaggccatgcacttccaagtggtgttttctgcg
gcgagactgatcggctggtacgaccccaacgtcacgcgagtggagcacgcaggctttggg
gtggtcctgggagaggacaagaagaaatttaaaacccgctcgggagacacggtcaggcta
atggacttgctggaagagggtttgaagcgatccatggacaagcttaaagagaaagagaga
gataaggttttgacgccggaggagctgatcaaggcccagcgcgccgtcgccttcggctgc
atcaagtacgccgacttgtcgcacaaccgcatcaatgactacgtcttctccttcgacaag
atgctcgacgacaggggcaacaccgccgcttacctgctctacgccttcacacgcatcagg
tccatagccaggctggccaacatcgaagaagcggccctgcgcaaagcggccgagacgtgt
gaaatcgtcctggagcacgagaaggaatggaaactgggcaagtgcatcctgagatttccc
gagatcctgcagaagatcctggacgacctgctgcttcacacgctgtgcgactacctgtac
gagctggccaccaccttcaccgagttctacgacagctgctactgcgtggagaaggaccga
cagacgggagaggtggtgaaagtgaacatgtggaggatgctcctgtgcgaggctacggct
gccgtcatggccaaaagcttcgacatcctgggccttaccccggtccagaggatgtga
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