Clarias gariepinus (North African catfish): 128507494
Help
Entry
128507494 CDS
T10780
Symbol
hnf1bb
Name
(RefSeq) hepatocyte nuclear factor 1-beta-B
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128507494 (hnf1bb)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128507494 (hnf1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
HNF-1B_C
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128507494
NCBI-ProteinID:
XP_053334435
LinkDB
All DBs
Position
19:complement(3211222..3226734)
Genome browser
AA seq
525 aa
AA seq
DB search
MFADMVSQLTSLQQELLSALLDSGLTKDELVQALNELEPRAHGFAIKTEKPLSPASANGA
SDTDSKPVYMTLQAARGSKVSGDEGSESGEDFDTPPILRELQSLNTEEANEQRAIVERML
AEDPWRSARTIKCYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTTKRASLYAWYVQ
KQREIDRQFGRVQGSSDSGSQDQVLFFFPEFQHSGGQSTGTASGTLTDDGVPGSKRLRRN
RFKWGPASQEILYKAYERQKNPSKEEREALVEECNRAECVQRGVSPSKAHGLGSNLVTEV
RVYNWFANRRKEEAFRQKLAMDAYPVHSMSSLLPPVHSHHHHHHGSPDTKLRYSHQGSSD
VTSSTGIGHHGNSQSVLQQVSPPGLDPCHSLLSPEAKMISASGGVLPPVSTLTNIHSLSQ
SSHHHQQAQSLIMTLAAQSLSAPPTQNVPIINSVSGLTALQPMQFPHSPNLTPLTAHSSQ
QAYAHMYSPKQEPPQPYSHPSRFSSMDTSAISHLGSSKQCPLQAW
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgacatggtgtcccagttgacgtctcttcagcaggagttactcagcgccttg
ttggactcgggactgaccaaggacgagctcgtgcaggcgctgaacgagctcgagccgcgc
gcgcacggcttcgctatcaaaaccgagaagcccttatcaccagcgagcgcgaacggcgcc
agcgatacggactccaagccggtatacatgaccttgcaggcagccagagggagtaaagtg
tccggggatgaaggctcggagtccggggaggatttcgacacgccgcctatcctgagagag
ctgcagtcgctgaacaccgaggaggcgaacgagcagcgcgccatcgtggagcgcatgctg
gctgaggatccgtggcgctcggctcgcactatcaaatgctacatgcagcagcacaacatt
cctcagcgcgaggtggtggacgtgacaggattgaatcagtctcacctctcgcagcacctg
aacaaaggaacacccatgaaaacaaccaaacgggcctcgctttacgcttggtatgtccag
aaacagcgagagattgaccggcagtttggtcgtgttcagggctccagtgactcaggcagt
caggatcaggtcctgttttttttcccagaattccaacacagcggggggcagagcactggc
accgcgtcggggacgcttacagacgatggagtcccgggttcgaaaagactgagacggaac
cgctttaaatggggcccggcgtcgcaggagatcctgtacaaggcgtatgagaggcagaag
aaccccagcaaagaggagagagaggcgctggtggaggaatgcaacagggctgagtgtgta
cagaggggtgtgtcaccctctaaagcccacggtctcggctctaacctggtcacggaagtt
cgcgtctataactggtttgctaaccggcgcaaagaggaagctttccgccagaagctggcc
atggatgcgtatccagttcacagcatgagctccttactgcctcccgtacacagccaccac
caccaccaccacggcagcccggataccaaactcagatacagccatcagggatccagtgat
gtcacttcctcaacaggcatcggtcaccatggcaacagccagtcggtgttacagcaggtg
tctccacccggcctggacccctgtcacagcctgttgtcccctgaagccaagatgatttct
gcctcgggtggagtcttgccccctgtgagcactctgaccaacatccacagtctgtcccag
tcgtctcaccatcaccagcaggctcagagtctcatcatgaccctcgctgctcagagcctg
agtgctcctccgactcagaatgtgcccatcattaacagcgtgtctggtctgacggcgttg
cagcccatgcagttcccacacagccccaacctcacaccacttactgcacactcctcccag
caggcctatgcacacatgtactcacccaagcaggagcctcctcaaccctactctcacccc
tctcgattctcctccatggacaccagtgctatctctcacctgggttccagcaagcagtgc
cctttgcaggcttggtga
DBGET
integrated database retrieval system
