KEGG   Clarias gariepinus (North African catfish): 128507521
Entry
128507521         CDS       T10780                                 
Symbol
larp1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgar03019]
    128507521 (larp1)
Messenger RNA biogenesis [BR:cgar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     128507521 (larp1)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 128507521
NCBI-ProteinID: XP_053334472
LinkDB
Position
19:29971010..29990833
AA seq 988 aa
MATQVETLLHTTSTTTATTPGTPSPSLQEDDPQPLAGHGELSPEPSSKQAGEESSPQDKK
EFREAPPPKVNPWTKKLNAVTVNGQAAEPTGPAKVVRAGNPRPRRGGKVGDFGDATNWPT
PGEIATKEVQGVKKASVKKEYKEKRESEETKENQKTKSDDSGEEKNGEDDSHKNSAHRKK
AGNKHKWVPLMIEVKSKGPRERSASRNNARQGETPRMHQNNRNDLRDWHSGKYEREQFRE
DHDEVSSVKSEGAPFRGGFRGRGRGRGRGGRGRGGRGGRGHYDYQYGFKYEGKDGVYDPK
YTQSVTYYYDNMSSAELYTVDQDLLKEYIKRQIEYYFSVGNLERDFFLRRKMDEGGFLPV
ALIASFHRVQALTTDISLITEALKDSKEVEIIDMKIRCKEDPEKWPLPGFTLSEHTHTDF
SQLIHCPEFIPRTTGDTPLTGSPRVHSAADQKQEEVCNLKTMPKGLSASLPDLDSECWIE
VKKRPRPSPARPKKPEDPRSGLTAGDQDEPEELDFLFDEEMEAMDGRRNTFTEWTDDESD
GEIDDHDVNKILIVTQTPPYLRKHPGGDRTGNHVSRSKLTNELVKVINDGLFYYEQDLWD
DSYEPEYATIKQEVENFKKVHLISREQFDCLTPEPPIDPNQEVPPCPPRPQHIPTDDLAN
KLFGAPERSVMARSLPTAVPDSPGYRAPHTPHTPRTPRCKHSTHTPRFYPVIKDGRPVDA
KTPRKRKTRHSSNPPMECHVGWVMDSREHRSRTASVSSNASPSEGTAALGNIGCTPQSLP
KFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRK
MYEEFRQLGVEDAKEGYRYGLECLFRYFSYGLERKFRPDIFKDFQEETIKDYEAGQLYGL
EKFWAFLKYSKAKNLEINSKLQEYLRSFRRLEDFRVDPPMDEGRRRHSSSGDGRRRHPSQ
SSARHGHTTDHAPEPKPGPAPAAADSGQ
NT seq 2967 nt   +upstreamnt  +downstreamnt
atggccactcaggtggagactctcctgcacaccaccagcaccaccaccgccaccaccccc
ggcaccccgagcccgagcctgcaggaggacgacccgcagcctctcgctgggcacggagag
ctcagcccggagcccagctccaagcaggccggggaggagagcagcccgcaggacaagaag
gagttcagagaagcgcctccgcccaaagtcaacccctggaccaagaagctgaacgcggtg
acagtgaacggacaggccgccgagccaactggaccggcaaaagtggtgagagcaggaaac
cctcgacccaggagaggaggaaaggttggagattttggagatgcaaccaactggccgaca
cctggagagatcgccaccaaggaagtgcagggggttaagaaggcttcagtaaaaaaggag
tataaggaaaagcgggagagtgaggagaccaaagagaaccagaagaccaaatcagatgat
tcaggagaggagaagaatggagaagacgactcgcacaagaacagcgctcacagaaagaaa
gcaggaaataagcataagtgggttcctctgatgatcgaggtgaagtccaagggaccacgc
gagcgctcggcctccaggaacaacgcacgccagggagaaactcccagaatgcaccaaaac
aacaggaacgacctcagagactggcacagtgggaaatacgagcgtgaacagttcagagag
gatcatgatgaggtgtcgagtgtgaagagcgagggagcgccattcaggggtgggttcagg
ggacgcgggagagggcggggtcgaggaggaagaggacgaggaggacgaggaggacgaggt
cactatgactatcagtatggcttcaagtacgaggggaaggacggcgtgtacgacccgaaa
tacacacagtcagtgacctattattacgacaacatgagcagcgccgagctgtacactgtg
gaccaggacctgctgaaagaatacatcaagagacagattgagtactacttcagtgtgggg
aatctggagcgagacttttttctcaggaggaagatggatgaaggtggcttcctacctgta
gccctgattgctagcttccatcgtgttcaagcgctcaccactgacatcagcctcatcact
gaggctctaaaggacagtaaggaggtggagataattgatatgaagattagatgtaaagaa
gatccagagaaatggcctcttcctggattcacactttctgaacacacacacactgacttc
tcccagctcatccactgtcctgagtttatcccccgcaccacaggcgacacacctctcaca
ggttctcctcgtgtgcattctgcagcagatcagaagcaggaagaagtgtgtaatctgaag
acgatgccgaagggtttatcagcgagtctcccggacctcgactctgagtgctggatcgaa
gtgaagaaacggccacgcccctcgcccgcaagaccaaaaaagccggaggaccctcgcagt
ggccttactgcaggggatcaggacgagcccgaggagctggacttcctgtttgacgaggag
atggaggcgatggacgggcggaggaacaccttcaccgagtggacggacgacgagtcagac
ggtgagatcgacgaccacgatgtcaacaagatcctgattgtgactcagaccccgccgtat
ctgcgcaaacaccccgggggcgaccggaccggcaaccacgtgtcccgctccaaactcact
aacgagctcgtcaaggtcatcaacgacggcctgttctactacgagcaggacctgtgggac
gactcgtatgagccggagtacgccaccatcaagcaagaggtggagaacttcaagaaggtt
cacctgatcagccgtgagcagtttgactgtttgacccctgaacctcccatcgaccccaac
caggaagtgccgccctgcccgcctcgcccacagcacattcccacagatgacctggcgaat
aagctgtttggtgctccggagcgttccgtgatggcgcgctctctccccaccgccgtgccc
gactcgcccggatacagagcgccacacacacctcacacaccgcgcacaccccgctgcaag
cacagtacacacacacctcgcttttaccccgtcatcaaagacggtcggccagtggatgcc
aagacgccgcgaaaaaggaagacacgtcacagctcgaatcccccgatggagtgtcacgtc
ggttgggtgatggactcgcgagaacatcgatcacgaactgcatctgtcagctctaatgcg
agtccgtctgaaggcacagcggctcttgggaacatcggctgcacccctcagtctcttcct
aaattccagcatccatcacacgagctgctgaaggagaacggcttcacacagcacgtctac
cacaagtacagacggcgctgcctcaatgagcgtaagcggctggggatcggtcagtctcag
gagatgaacacactcttccgtttctggtcgttcttcctgcgtgatcactttaacaggaaa
atgtacgaggagttcagacagctgggagtcgaggacgccaaggagggttacaggtacgga
ttggagtgtctgttccggtatttcagttacggtctggaaagaaaattcagacctgacatt
ttcaaagacttccaggaggaaaccatcaaagattacgaagcaggtcagctgtacggtctg
gagaagttctgggcttttctcaaatactctaaagccaagaatcttgagatcaactccaaa
ctgcaggagtacttgcgcagttttagacgcctggaggacttcagagtggaccccccaatg
gatgaaggtcgtagacgtcactcctccagcggggatgggcgtcgccgtcacccgtctcag
tcctccgctcgccacggccacaccactgaccacgccccggagccgaagcctggccccgcc
cccgccgctgctgactctggccagtga

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