Clarias gariepinus (North African catfish): 128507538
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Entry
128507538 CDS
T10780
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128507538 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128507538 (nfrkb)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
128507538 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
128507538
NCBI-ProteinID:
XP_053334506
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All DBs
Position
19:9201176..9220565
Genome browser
AA seq
1289 aa
AA seq
DB search
MDSLDHMLTDPLDTGMDYDGCVMEECMLGNCRVRIPEDFLEDPEIFFSVMSESTWSEVLT
DSQRQHLRQLLPHFPENNSSEQDRVISDLFNDQNFFFGNPLHIAQKLFRDGYFNPEVVKY
RQLCAKSQKKRQIYCLQQYYHNLLKQILVSRKELLDMAVRSGPELALKRRYPPPSNREER
EQRVRRRVNCILREVKSECGDSNVSSDEDDTASWLSAPPSPSSPTQTVSLRVLPSLSTQD
MKTIDKPELGEKDLKAMLRRHKEKRKRQPDHPALMTSDLHLGDVMSRVNIGRKGSSIALI
DLALSKKKIREEKRRKKMRPIKTESDDGCEGQTPAASLSATVSDSTPVLLQSVKEEAMEE
SQNSPDLVEEIAISFFHLLEEILRPDSLTSSLIEEKVQQWQASAASALNPWFSMAPCWSE
LVVPALQFLAGESKSGSMALPSGFIPYVEFIELTQQWKWIGTTQDSEKDLNALCMLWLES
KDQVVVKQEGEEAAELTPPAPRVWTDYVVRPSTGEERHVFQEQEQRRYDQPHKAYTFRMH
GFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEIC
ELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSQEEFER
IHQAQAAAAKARKALQQKPKPTPKPKSGNKEAAVKGSATDGQSTAPETISMPAVSLPQPP
STPTPSTPGTPKSPLPPTVSTPTKAAMPDSVKTSPSVLLVSPPSMPQLGTLLSAAQVAPQ
SSQQASVQPAARVVAHSASTGSLPQVRVVTAQPGLPAASAGQAATLIHHQTPHHIRLPVS
VAHTKGMAQTVVTLPLRSQTTGSPIQVQASRAQTSISVPGLASAVAVSKAQSSSPGSPAP
NAPSPAVLQGVTSQNIIKQVAITGQLGVKAQNPAGIPLTATNLRIQGKDVLRLPPSSITT
DAKGQTVLRITPDMMATLKLTPDMLTSTSNTAAKGISATLHVSPQQVPPTVSPNPVPPPT
AEALTAKAPSSLPAPGTATLVKATCDTAIRLMPALAVTMADPKARTFSTVTSSDSKAGGT
TIRIVPSLGVIPQKQGQTVPVNTTTSAKPGTASLGAATVTIATSGVAAAKGVTLGTPAMG
SPLSLGTAAATMRQVPVTATVVATQPGKLPARITVPLSVLSQPLKSKSVVTSPILKGNIS
TNISNLGRNIILTSMPAGTKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVPAQQLQQ
HSASGSPKSTVSTVVVSTAPSAKTTPDSQ
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggattctttagatcacatgctgacagatcccttagacacagggatggactacgatggc
tgtgtgatggaggaatgcatgttggggaactgcagagttcggataccagaagattttcta
gaagatccagagattttcttctctgtgatgagtgaaagcacttggtctgaggttctgact
gattcccagagacaacacctccgtcagctcctgccgcactttccagagaataactcttca
gaacaggacagggtcattagtgacctattcaatgaccagaactttttctttggaaaccca
ttacatattgctcagaagctatttagagatggctactttaacccggaagttgttaagtat
aggcagctctgtgcaaagtcacagaaaaagcgtcaaatctactgtctccagcagtactac
cacaatttgcttaagcaaattcttgtctccagaaaggagttgttggatatggctgttcgc
agtggaccagagctagcattgaaacggcgttaccctcctccttctaacagagaggagcga
gagcagcgtgtgaggcgcagagtgaactgtatactgcgtgaggtgaaatctgagtgtggg
gacagcaacgtgtcttctgatgaagacgacacggcgtcttggctgtcagcgcctccttcc
ccatcatctccaacacaaacggtctctctcagggttttgcccagtctttccacccaggac
atgaaaactatagataagccagagctgggagagaaggatttaaaagccatgctgagaaga
cacaaagagaagaggaaacgacaaccggatcatcctgccttgatgacatcagacttgcac
cttggtgacgtcatgtcgcgggttaatataggcagaaaaggatccagtatagccttaatt
gacttggccttgtctaagaagaagatcagagaagagaaaaggaggaaaaagatgcgaccc
attaaaactgaatccgatgacggttgtgagggtcaaacaccagcagcatcattgtctgcc
actgttagcgacagcacacctgttctcctgcagagtgttaaggaagaagctatggaggag
tcccagaacagccctgatttagtggaggaaatagctattagcttcttccatctgcttgaa
gaaatcctaagaccggacagtcttacatcttcactgattgaggagaaggtacagcagtgg
caggcctctgctgctagtgcactcaacccttggttctccatggccccttgttggtcagag
ttagtagtacctgcgctacagttcctagctggggagagcaagtctggatctatggctcta
cctagtggcttcattccgtatgtggaatttatagagctcacacagcagtggaaatggatt
ggaaccactcaggacagtgaaaaagatctcaatgctctttgcatgctttggctggagtca
aaggatcaagttgtagtcaagcaagaaggggaagaagcagcagaactgactcctccagct
ccgagagtatggactgattatgtggtgaggcccagtacaggagaggagcgtcacgttttt
caagagcaggagcagcgacgctatgatcagcctcacaaggcctacaccttccgcatgcac
ggctttgagtctgtggtggggccggtcaagggagtttttgataaggagacttccctcaac
aaagcccgagagcactcgctgctgcgttctgaccgcccagcttacgtcaccatcctctca
ctggtgcgggatgcagctgccagacttcccaatggtgaaggcactcgagctgagatatgc
gagctacttaaagactcccagtttttggctcctgatgtcaccagtgcacaggtgaataca
gttgttagcggtgctctcgaccgcctgcactatgagaaggacccatgcgtgaaatacgac
attggccgcaaactgtggatctacctgcaccgagaccggagtcaagaggagtttgaaagg
atccatcaggctcaagcagctgcagccaaggcacggaaagctctgcagcagaaacccaaa
ccaacccccaagcccaagtctggaaacaaagaagcagctgtgaagggcagtgcgacagac
ggccaaagcacagcaccagaaacgatttctatgcctgctgtcagcttacctcagccccca
agcacaccaacgccaagcaccccaggcacaccaaaatctccactaccccctactgtgtct
acacccaccaaagcagccatgccagattcagtcaaaaccagtcctagcgtcctgctggtg
tctcctccctccatgccacaactgggcactttgctgtctgccgctcaagtcgctcctcag
tcctcccagcaggcctcagtgcagccagcagctcgagtggtggctcattctgcttcaaca
gggtctttgccacaggtgcgcgtagttactgctcagcctggccttcctgctgcttctgca
ggccaggcagccacactgatccaccaccagaccccccaccatatcagactgcctgtcagt
gtggcacacactaagggcatggcccagactgtggtaacactgcctttgaggagccaaaca
acaggaagccctatccaggtgcaagcgtcaagagctcaaactagcatctctgtgccaggc
ctggcttctgctgttgctgtcagtaaagctcagagcagttcccctggaagccctgctcca
aacgctccatctcctgcagtgctgcaaggggtcaccagccagaacattatcaaacaagtt
gctattacaggtcagctgggtgtgaaagcccagaacccagcaggcattccactgactgcc
accaaccttagaattcagggtaaagatgttctgcgcctaccgccctcttcaatcaccact
gacgctaaaggacagacggtgctgcgcatcaccccggacatgatggctactcttaaactc
acccctgacatgctgaccagcaccagcaacaccgctgctaaaggcatatctgccaccctg
cacgtgtccccacagcaagtccctcccactgtttcacccaacccagttcctccacccacc
gccgaggctctgactgccaaagctccctcttccctgcctgcaccaggtaccgctacactg
gtgaaggccacgtgtgacacagctatccgtctcatgccagctttggcggtcaccatggca
gaccccaaagcccgcaccttctccacagtcacctcctcggactcgaaagctggtggaacc
accattcgcattgtgcccagcctgggcgtgataccacagaaacagggtcagacggttcca
gtcaacaccactacaagcgccaagcctggcactgcttctttaggagctgccacggttact
atagcaaccagtggtgtggcagcagctaaaggggtgacattgggcactcctgccatgggc
tcaccgctttctctgggcactgctgcagccacaatgagacaagtgcctgtcactgctaca
gtggtggcgacacaaccagggaagttacctgcaaggatcacagtgcctttgtccgttctt
agtcagcccctgaagagcaaaagtgtggttacttcgccaatactgaaaggaaacatcagt
actaatatcagtaatcttggccggaatattattctgaccagcatgccagcaggcaccaag
ctcattgccgggaataagcctgtcagctttgttacagctcagcagctgcagcagctacag
caacagggccaggccacacaggttcgcatccagactgtcccagcacagcaactgcagcag
cactcagcatccggctcgcctaaatctacagtgtccactgtggtggtgtccactgccccc
tccgcaaaaacaacccctgactcacagtaa
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