Clarias gariepinus (North African catfish): 128507567
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Entry
128507567 CDS
T10780
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04814
Motor proteins
Brite
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128507567 (myo5b)
mRNA cycle factors
P-body specific factors
128507567 (myo5b)
Membrane trafficking [BR:
cgar04131
]
Others
Actin-binding proteins
Myosins
128507567 (myo5b)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128507567 (myo5b)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128507567 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128507567
NCBI-ProteinID:
XP_053334559
LinkDB
All DBs
Position
19:11469553..11547731
Genome browser
AA seq
1814 aa
AA seq
DB search
MTTDQELYSKYTRVWIPDPEEVWKPAEIIKDYKEGEAVLHLKLEDESTLQYPIGPKDNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIY
GEEVINAYNGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSFNDTSVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLSLTSAEDFTYTSFGQNIFIPGV
NDSVDLKKTREALSMLGVKEAHQMSIFKIIASILHLGNVEIVSERDGESCHIARNDPHLV
HFCELLGVERDQMENWLSRRKLATATETYVKNMSRDQAANARDALAKHIYAHLFDWIVEH
INKALVTSTKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQDEYM
KEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYSRHTSSEHFE
KPRMSNTSFVVVHFADKVEYQCEGFLEKNRDTVYEEQINILKASKFQLVADLFQDTDAPA
PTSKTGKHNVRPAKPMPKGHNREHRKTVGTQFRSSLHLLMETLNATTPHYVRCIKPNDVK
EAFVFDSKRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKKDVTADRKQVC
RTLLETLIKDPDKFQFGKTKIFFRAGQVAYLEKLRGDKFRYACIKMQKTVRGWLQRRRYQ
KIRKSVVLLQRYGRGVLARRYAEQLRLTKVALICQKQYRMARVRRSYLTVRKATVTIQAF
TRGMFTRRMYHEYLMHHKASVIQRAVRGWLQRRKFCRARDAAVVLQCAYRRVLAKRQLKQ
LKVEARSAEHFKNLNVGMENKIVQLRRKMDDQKLEYKSQSEKLSVANTALVIEVSKLQKE
LETAQSSKIEAPKLSTLQDEVEKLRAELKEAHVQRKQLEEQHSTEKLGLEQKVQELEKEN
SLLKEEKEAMNQKILRQSQSSGGKGGNLTQKEANLQAELDDERLRYQNLLKEFSRLEQRY
ENLQEEASFAKLAPGLRRRPSDLSSLGSDSTFPSISMSEVGDTEDTIQQVEDMGVEKAAN
DISVFMKLQKRVRELEQERKRLQTNLEKMEELNKQKVTEAKPLASEEADTQADLAYNSLK
RQELESENKKLKNDLNELRKSLADRASENCSSNELQDSYSVLLNQLKAANEELDVRKEEV
LMLKTQIVSTPKPSESKGQIISKDIEWDNSKNPVDKEEVIQAYQGLSESKRLLETQLQSQ
NRKHKDELEALRTQIEVMKEDLEKKQEMLNHFSLLPPDALVEYSVQQEITRLTNENLDLK
EIMEKLEKNERKLKKQLKIYMKKVQDLEATQAAANRPRLVRQVTVQRKEKDFEGMLEYHK
DDEAVLIRMLITDMKPQLVSATVPCLPAYVLFMCIRHADYINDDNKVNSLLTSTINAIKK
VLKKNCDDFDMTSFWLANTSRLLQCLKQYSGEESFMTQNTPKQNEHSLKNFDLAEYRQVL
SDLSIQIYQQLVRIAESMLQPMIVSAMLESGSLTGVKPLGYRHRSSSVDCYSDGPSSYTL
EALIKQLSQFHTVMSDHGLDPEIGGQVVRQLFYCINAVSLNNLLLRKDMCSWSTGMQLRY
NISQMEEWLRGRNLHQREIMLTIEPLIQAAQLLQVKKKTSQDAEAICAMCNILSTQQIVK
ILNLYTPLNEFEERVTVSFIRDIQNLLQDRVENSQLLVDTKHTYPVLFPYTPSALSLETL
HIPASLNLDFLVRV
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgatcaagagctttacagcaagtacacccgggtttggatccctgacccagag
gaggtgtggaaacctgctgagattataaaagactataaggagggagaggcggtcctgcac
ctaaaacttgaagatgaatcaaccctgcagtatccaatcggtcctaaagacaacccgctg
ccatttcttcgaaaccctgatatcctggtgggagagaatgaccttactgccctcagctac
ctgcatgaacctgcagtgctgcacaacctcaaggtccgcttcctggagtccaaccacatc
tacacctactgtggtatcgtactggtggccattaatccctatgagcaactgccgatttat
ggcgaggaagtcatcaatgcctacaacgggcagaacatgggtgacatggaccctcatata
tttgctgtggcagaggaggcttataaacagatggctagagatgagaaaaaccagtcgatc
attgtgagtggagaatcaggagctgggaagacggtctctgcaaaatatgccatgcgctac
ttcgccactgtgggaggatccttcaacgacacaagcgtggaggagaaagtgctggcatca
agccccatcatggaggcaatcggaaatgcaaagacgacacgtaatgacaacagcagccgc
ttcgggaaatacatccagatcggttttgacaggagatatcacatcattggagccaacatg
cgcacgtatttgctagagaagtccagagtggtgtttcaggcggaagatgagaggaactac
cacatcttctaccagctgtgtgcctctgcctcactccctgagtttaaagatctgtctctg
accagtgcagaagacttcacttacacctcttttggtcagaacatcttcattccaggggtt
aatgactctgtggacctgaagaagacacgggaagccttgagcatgctgggtgtaaaggag
gcccatcagatgagcatcttcaagataattgcctccattttgcaccttgggaatgtggaa
attgtttctgagagagatggagagtcatgccatatagctagaaacgaccctcaccttgtt
catttctgtgagttgcttggggtcgagcgggaccaaatggaaaactggctgagccgtaga
aagttagccacagcaactgagacctacgtgaagaacatgtcccgtgaccaggctgctaat
gctcgcgacgctttggccaaacacatatatgcccatctgtttgactggatcgtagagcac
attaacaaagccctggttacctccaccaaacagcactcctttatcggggtgttggatatc
tacggatttgaaacgttcgagattaacagtttcgagcagttctgcatcaactacgccaat
gagaaacttcagcagcaattcaactctcatgtttttaaactggagcaggacgagtacatg
aaggaacaaatcccatggacgctcatagatttttacgacaaccagccctgcattgactta
atcgaggccaaacttggtatcctggacctcctggatgaagagtgcaaggtacctaaagga
acagatcagaactgggcgcagaagctctacagccgccacactagcagcgaacacttcgag
aagccgagaatgtccaacacatcattcgttgtggtccattttgcagataaggtcgagtat
cagtgtgaaggcttcttggagaagaacagggacactgtgtatgaagaacagatcaacatc
ttgaaggccagcaagttccagcttgtggcagatctcttccaggacacggatgctcctgct
ccaacaagcaaaaccggcaagcacaacgtacgtcctgctaaacccatgcccaaaggacac
aaccgtgagcaccgcaaaactgttggcacccagtttcggagttctttacatcttctgatg
gaaactctgaatgctacaactccacactatgtacgctgcataaaacccaatgatgtcaaa
gaagcctttgtgtttgattctaagagagccgtccagcagctacgagcatgtggtgttcta
gagaccattcgcatcagcgctgcaggatatccatccaggtggacgtacccagatttcttt
aacagatatcgggtgctgatgaaaaagaaagacgtgactgctgataggaagcaggtgtgc
agaaccctcctggagaccttgatcaaggatccagataagttccagtttggaaagactaag
atctttttccgagctggtcaagtggcgtacctcgagaagctccgaggcgacaagttccgc
tacgcttgcattaagatgcagaagacagtgagaggatggctgcagaggaggcgctatcag
aaaatccgcaagtcagttgtcttgctccagagatatggccgtggcgtcttggcacgcagg
tatgcagaacagttgcgtctcaccaaagtggctcttatctgtcagaagcagtacaggatg
gcgagagtccggcgttcatatctgaccgttcgcaaggctacagtcaccattcaggccttc
acacggggcatgttcacacgccgcatgtaccacgagtacctgatgcaccacaaggccagt
gtcatccagagagccgtgcgtggatggctgcagagaaggaagttctgccgtgcacgtgat
gcagcggtggtgctgcagtgcgcttacagacgcgtacttgccaagcgacagctcaaacag
ctgaaggtcgaggcccgctcagcagaacacttcaagaatctcaacgtcggcatggagaat
aagatcgtccagcttcggagaaaaatggatgatcagaaactcgagtataagtcgcagagt
gagaagctgtctgtagccaacaccgcattggtcatagaggtcagcaaactgcagaaggag
ctggagacggcacagagtagtaaaattgaggctccaaagctaagcactctccaggacgag
gttgagaaactgagggcagagctaaaggaggcacatgtccagagaaagcagcttgaggag
cagcacagtactgagaagctgggactggaacagaaagtccaggagttggagaaagaaaac
tctctgttgaaggaggaaaaagaagcaatgaaccagaagatactccgccagtcacagagc
tctggaggtaagggtggtaatttgactcagaaagaggctaacctacaggctgagctggat
gacgagagactgcgctatcagaacctgctgaaggagttttccagactggagcagagatat
gaaaaccttcaggaggaggccagttttgccaagttagctccaggccttcggaggagaccg
tccgacctaagcagcttgggctcagactccaccttcccctccatctctatgtctgaggtt
ggagacactgaggacactattcagcaggtggaggatatgggagtggagaaggcagccaac
gacatcagtgtattcatgaagctgcagaagagagttcgtgagctggagcaggagaggaag
aggctccagactaacttggagaagatggaggaactcaacaagcaaaaggtgactgaagca
aagcccttggcgtcagaagaggcagacacacaggcagatctggcatacaacagtctcaag
aggcaggagctggaatctgaaaacaagaagctaaagaatgacttgaacgaactcaggaag
tccttggcagacagagcatctgagaactgctcatccaatgaactgcaagacagctacagt
gttctgctcaatcagctcaaagcggccaatgaggagctggacgtacgcaaagaagaggtt
ctcatgctaaaaacccaaatcgtcagtacccccaagccatcagaaagcaagggtcaaatt
atctccaaagacattgaatgggacaacagcaaaaaccctgtggacaaggaggaggttata
caggcctaccagggtctcagtgagtccaagagactgttggagacacagctccaatcccaa
aacaggaagcacaaagatgagctcgaggctctgcgcacacaaattgaggtgatgaaggag
gatctggagaagaaacaggagatgctaaatcatttcagcttgctgcccccagatgccctg
gtggagtacagcgtccagcaggagatcacacggctcaccaacgagaacctggacctcaag
gagatcatggaaaagctggagaaaaatgagaggaagcttaaaaagcagctcaagatctac
atgaagaaagttcaggatcttgaagccactcaggcagcggcgaatcgaccccgtctggtc
agacaggtcacagttcagaggaaggagaaagattttgagggcatgctggagtaccacaaa
gatgacgaggccgtcctgatcagaatgctcatcactgacatgaagccacagttagtttcc
gctacagtaccttgtctcccagcgtacgtcctcttcatgtgcatccgtcatgcagattac
atcaacgatgacaataaagtaaactctctgctcacttccaccattaacgctatcaagaaa
gtccttaagaaaaactgtgatgacttcgacatgacgtctttctggctggctaacacgagt
cgactgctgcagtgcctgaaacaatacagtggagaggagtcattcatgacccagaacaca
cctaaacagaacgagcacagcttgaagaactttgacctggctgagtaccggcaggttctg
agtgacctgagcatccagatctaccagcagcttgttagaatagccgagagcatgctccaa
cccatgatcgtgtcagctatgctagaaagtggcagtctgactggagtcaagcccctgggt
tacagacaccgctcctctagcgtggactgttacagcgatggcccgtcaagctacacattg
gaggctctgatcaaacagctcagtcagttccacacagtcatgtccgaccatggtctggat
cctgagatcggcggacaggttgtgcgccagctcttctactgcatcaatgctgtgtcacta
aacaacctactgctgcgcaaagacatgtgctcctggagcactggcatgcagctcaggtac
aacatcagtcagatggaggagtggttgaggggacgaaatcttcatcagagggaaattatg
ttaaccattgagcccctcatccaggctgctcaattgctacaggtgaagaagaagacatct
caggatgctgaggccatctgcgccatgtgtaatattctgagcacacaacagattgtgaag
atcttgaatctgtacactccactgaacgagtttgaggaaagggtcactgtgtccttcatc
agagacatacagaaccttctacaagaccgtgtagaaaacagccagctcctggtggacacc
aagcacacataccccgtgctcttcccttacactccttcagctttgagcctggagacgctg
cacatccctgcctctctcaacctggacttccttgtcagagtttga
DBGET
integrated database retrieval system
