Clarias gariepinus (North African catfish): 128507584
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Entry
128507584 CDS
T10780
Symbol
srsf1b
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128507584 (srsf1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128507584 (srsf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128507584 (srsf1b)
Spliceosome [BR:
cgar03041
]
Common components
Common spliceosomal components
SR proteins
128507584 (srsf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
TP2
Motif
Other DBs
NCBI-GeneID:
128507584
NCBI-ProteinID:
XP_053334583
LinkDB
All DBs
Position
19:complement(3264925..3269854)
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AA seq
245 aa
AA seq
DB search
MSSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGAGGGAGAPRGRYGPPSRRSEY
RVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFR
SHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSR
SRSRT
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcggtggagtgatccgaggtcctgcaggaaacaacgactgccggatctacgtg
gggaatctgcctcccgacattcgcaccaaagacgtcgaagacgtgttttacaaatatgga
gcaatccgagatattgacctgaaaaaccgaagaggaggaccgcctttcgcgtttgttgaa
tttgaggacccaagagacgcagaagatgccgtgtacggaagagatggctatgactacgat
ggctatcgtttgcgagtggagttccccaggagtgggagaggtgggggaagaggtggagca
ggaggtggagcaggggctcccagaggcagatacggccctccatcccggcgctccgagtac
agggtcatagtttcagggctccctcctagcggaagctggcaggacctaaaggatcacatg
cgtgaagcaggtgatgtatgttatgctgatgttttccgagatggcaccggtgttgtggag
tttgtgcgcaaggaagacatgacctacgcggtgcgaaagctggataacactaagttccgg
tcccacgagggtgagacagcttacatccgtgtaaaggtggacggcccacgaagcccgagc
tacgggcggtcacgctctcgtagtcgcagcagaagccggagcaggagcaacagccgtagc
cgcagctactccccacgtcgcagcagaggatctccgcgttactcgcctcgccacagccgc
tctcgctcccgtacttaa
DBGET
integrated database retrieval system
