Clarias gariepinus (North African catfish): 128507671
Help
Entry
128507671 CDS
T10780
Symbol
nsd1b
Name
(RefSeq) histone-lysine N-methyltransferase, H3 lysine-36 specific
KO
K15588
[histone H3]-lysine36 N-dimethyltransferase NSD1 [EC:
2.1.1.357
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00310
Lysine degradation
cgar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128507671 (nsd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128507671 (nsd1b)
Enzymes [BR:
cgar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
128507671 (nsd1b)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128507671 (nsd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
SET
PHD-1st_NSD
C5HCH
AWS
PHD_NSD
PHD
PHDvar_NSD
zf-HC5HC2H_2
PHD_2
Motif
Other DBs
NCBI-GeneID:
128507671
NCBI-ProteinID:
XP_053334702
LinkDB
All DBs
Position
19:2018439..2041392
Genome browser
AA seq
1914 aa
AA seq
DB search
MDTASPETRTDTSTRMSPPSPAFSLDSSSPFANGLHFESILFEDEDVGEDAGPRSAHKKQ
CSSSLNEIAASTNLKQKLTVLDRRHSVSKGKRRTKSCRSVKRDENIEDEAGGDSDPASTE
RIHDEGTTELNNPKSKPLTPVKYLESEVVWAKFNRRPWWPCRVIINPALETYHRLKEQSD
NTCRQYYIKTLGEPEELAWVTEKALHKFLGEYQFYNLPGPKRGVPKRFQNSWSCSVAEAE
AHFLDKPGIPVITSKFTENRQFDEETKDQEDKVPNPEVLLGIPGNGCQANGKISHKDPNF
LMKSKCKRKQRKSSALFFTKYDEFLCENTELEEVVDSPYSDIDSVPQIRRCPKGNGRPAT
NDQPVRQVTNQHDKEAKKSIEVQGGLWFSKVGKGQTSGVFSRAGIKSVNCSFGKVSCKIK
IPESTSMKSRDNQVTGPEQQCVESKKTLDNRVASLPASSRLMTRALKAMEDAQLEQTSSR
DLKETQPSADACVKKSVCSEKTKVKSSRQKSSTSLDLKPDLKSGCVSKVSGDPSDLKEQD
VAVKSEDESCSISFNCTDSNLKQENQVSEASTFSTPSPSSFRVNIQDGEDLKEITFKSLE
NEKNGKSAPFHPDANYKYSTFLMLLKDIHDSREKDGQPLVMEPLPAKKLIKEEPPLISEK
HPIKNSFSRVKGDRNGCVSGKYGQSKTSSFKSKQNKTNAKFGPDMREHNGCVVQQFQSFS
PVPKSAKKTSKKSQPVVKKSLTIPFVPSDLSANACSRNSENTPSTGCRLLNKDSEKSFFG
SVPKKRWQRFDPDKDKTPKAEIRSDPRPGQPEMPPVEQKSVLEPGAEKTSLTSSGSTSAS
DIPEINTASITPSTCQASGFPTESKRIRKPSKRLIEWTEDNDHTFRIKKKPRKQPESLQK
VIRNSSVSNAEKSSGIHQHQGGIQPAPNPLPEIQTPPPEERSKTPPMLENTPCQESQAVV
LAVDTLTPPPETETSLYGENCFKEQILVQNSSTTGDGVCLSTKRQRKPTKKILESSIEAE
PIPTPKKKVKSQRNSSSGHSAHQGIGQSKSKSKQPAVITAEENLAVSASTEREVDSTTPT
NPDTLNNETTKDGKYALESEIFDPTDDGEAKNESADNRLSAEKGSGVLLKDSVCQVCEKH
GELLLCEGQCCSTFHPQCVGLTEAPPGKFLCQHCTSGTHECFMCKKVGDDVRRCMVPACG
KFYHGECIASHALTVPLNRGFRCSLHACLACFITNQSNPSVFKGRLIHCVRCPIAYHASD
YCIPAGSIILSTNTILCPNHFTPRKGCRNHEHVNVSWCFVCSEGGSLLCCESCPAAFHRE
CLNIDMPEGSWFCNDCRAGKKPHYREVVWVKVGRYRWWPAEVSNPKDIPENILRMRHDVG
EFPVLFFGSNDYLWTYQARVFPYMEGDANSKEKMGKGVDSVYRKALDEAAERFRELQAEK
ELRQLQEDRRNDKKPPPYKHIKVNRPIGKVQIITADLSEIPRCNCKATDENPCGIDSECI
NRMLLYECHPQVCPAEEKCQNQGFTKRQYSQVEIFRTLSRGWGLRCCHDIKKGAFVSEYV
GEVIDEEECRARIKRAQENDIGNFYLLTLDKDRIIDAGPKGNQARFMNHSCQPNCETQKW
TVNGDTRVGLFALVDIAAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLGVRPKNNPPAD
DKGRKLKRKAHAKRKSQQELTKEREDECFSCGDGGQMVSCKRPGCPKVYHADCLNLTKRP
AGRWECPWHQCDLCGQESASFCEMCPSSYCGEHRDGMLFISKLDGRLSCSEHDPCGPEPL
EPGEIREYIPEHASAYPVKAFPHYQNPSCETGPIDPVCQSSDALLISSSPPRSPSLAIAF
NSAYSPVSSYEEEENSVDLEEDVEEDGVRILEDAEEHTGSETRYKRGLKVTLTV
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggacacggcttcgcctgagactaggactgacactagcacacgcatgtctcctcccagt
ccggcgttcagtctcgattcgtccagtccgttcgcaaacggcttgcacttcgagtcaatt
ttgtttgaagatgaggacgtaggtgaggacgcaggcccaaggtctgcacacaaaaagcag
tgtagcagctccttaaacgagattgctgcatctacaaatttgaagcaaaagctcaccgtt
ctggatagacgccacagtgtgtcgaaaggcaaaagaaggacaaagagctgcaggtcagtg
aaacgagatgaaaacatagaggacgaggctggtggagacagcgatccagcctccacagag
cgcatccatgatgagggtaccacggagctgaacaacccaaagtcaaagcctctaacgcct
gtgaagtatctagaaagtgaagtcgtatgggccaagttcaaccgtagaccctggtggcca
tgccgcgtgatcatcaatccagcgttggaaacgtatcacagattaaaagagcaaagcgat
aacacctgtcgtcaatattacatcaagacactcggagaacccgaggaactggcctgggtc
actgagaaagctttgcataaatttcttggtgaatatcagttttacaatctccctggtcca
aagagaggggtccctaagcggtttcaaaactcatggagttgtagtgtagccgaggctgag
gcgcatttcctggataagcccgggatacccgttatcacgtctaaattcacagaaaacagg
caattcgatgaagaaacaaaagatcaagaagataaagtacctaaccctgaggtgctcctg
ggaatccctgggaatggttgccaagccaacgggaagatttcacacaaagacccgaacttt
ttaatgaagtctaaatgcaaaaggaagcaaagaaaaagctcagcactgttttttacaaag
tatgacgagttcctctgtgaaaatacagagttagaagaagtggtggatagtccctattct
gatatcgactctgtcccgcaaatccgccgatgtcctaaaggcaatggccgacctgctact
aatgatcagcctgtaagacaggtcacaaaccaacatgataaagaagcaaagaaaagtatt
gaagtccaaggtggactgtggttcagcaaagttggaaaaggacaaaccagtggagtgttt
agtcgtgcgggaataaaatcggtgaactgctcattcgggaaggtatcatgtaagatcaag
ataccagagtcgacaagtatgaagtccagagacaaccaagtcacggggcctgagcagcaa
tgtgtagaaagcaagaaaaccctcgacaatagagttgcaagtctcccagccagcagtcga
ttgatgactagagcgctaaaagcaatggaagacgctcagctcgagcagacgtctagccga
gatctcaaggaaactcagccgagtgctgatgcatgtgttaaaaaatctgtgtgcagtgaa
aagacaaaagtcaaatcaagccgccagaaaagttcaacaagtttagatttgaaaccggac
ttaaaatctggttgcgtttccaaggtgtctggagatccgtctgatttaaaagagcaagac
gttgcggtgaaatcagaggacgaatcttgttcaatatctttcaattgtactgattccaac
ctgaaacaagagaatcaggtgtctgaggcgtcaacgttttccacgccatctccatcttca
tttcgtgtaaatatacaagacggcgaagacctgaaagaaataacctttaagtcactggaa
aatgaaaaaaatggaaagtcagcaccgtttcatccagacgcgaactataaatacagcacc
ttcctgatgttgttaaaagatatacatgatagtcgagagaaagacggccaacccttggtc
atggaacctttaccagcaaaaaagctcattaaagaagagccgcccctgatttctgaaaaa
catcccataaaaaacagcttcagtcgtgttaaaggcgatcgtaacggctgtgtctctgga
aagtatggccagagcaaaacgtctagttttaagtccaaacaaaataaaacaaatgcaaag
tttggcccagatatgagggagcacaatggttgtgttgttcagcaattccagagtttttct
cctgtaccaaaatctgctaaaaaaacaagcaaaaaaagtcaacctgttgtaaagaagagc
cttaccatccccttcgtgccttccgatttgtcagcgaatgcgtgtagcaggaactcagaa
aatacaccaagcacggggtgcagactgctcaacaaggactcagagaaaagtttttttggc
agcgtacctaaaaaacgctggcagaggtttgacccggacaaggacaagacgccgaaagca
gagatcagaagtgacccaagaccagggcaaccggaaatgccgcctgtagagcagaaaagc
gtcttggagcctggtgctgagaaaaccagtttaacatcatcaggatcaacatcagcatcc
gacataccagagataaacacagccagtataactccaagtacctgtcaggcttccggtttc
ccaacagagagcaaacgtatccgaaagcctagcaaaagactcattgagtggacagaggac
aacgatcacacgttcaggataaagaagaaacccaggaagcaacctgaatctttgcagaag
gttattagaaacagttccgttagtaacgccgagaaatcttcaggcatccatcaacatcaa
ggagggatacaacctgcgccgaaccccttaccggaaattcagacccctccccctgaagag
aggtcgaagactcctcctatgttggaaaatactccatgtcaagaaagtcaggctgtagtt
ctggctgtagacactctaaccccgcctccagagacggaaacctcgctgtacggggagaac
tgttttaaagaacagattctggttcagaattcttccactactggtgatggcgtctgttta
agcacaaagaggcaaaggaagcccaccaagaaaatcctagaaagttcgatcgaagctgag
ccgattccgacgcctaagaagaaggtgaaatctcagaggaacagttcttcaggacattct
gcccatcaaggaattggtcaatcaaaaagtaagagcaagcagcctgctgtaatcactgct
gaagaaaacctcgcagtttcggcgagtaccgagagggaggtggatagcaccacgcccacg
aaccctgacacacttaacaatgagacgaccaaggacggcaaatacgctctggaatctgag
atatttgaccccaccgacgacggagaggcgaagaacgaatccgctgacaacagactctcg
gcggagaaagggagcggcgtgttgctgaaagacagcgtttgtcaggtttgtgagaaacat
ggagagctgcttctttgtgaaggccaatgctgcagcaccttccacccacagtgtgtcgga
ttgaccgaggctccacccgggaagtttctgtgtcagcattgcacttctggcacccacgaa
tgtttcatgtgtaagaaggtgggagacgacgtgaggcgctgcatggtccccgcctgcggg
aagttctaccacggagagtgcatcgctagccacgccctcacggtgcctttgaaccgaggc
ttccgctgctcccttcatgcttgcctggcctgcttcatcaccaaccagagcaacccttcg
gtttttaaaggtcgactgatccactgcgtaagatgccccattgcctaccatgccagtgat
tactgcatccctgccggcagcatcatcctgtccactaacaccatcctctgtcccaaccac
ttcacgccacgaaagggctgccgcaatcacgagcatgtcaacgtcagctggtgcttcgtt
tgctcagaaggaggtagcctgctttgctgcgagtcctgtcccgcggcttttcaccgcgag
tgtctgaacatcgacatgcccgaggggagctggttctgcaacgactgtcgagccgggaag
aaaccacactacagagaagtggtctgggtgaaagtgggtcgctacagatggtggcctgca
gaagtcagcaaccctaaagacattcctgaaaatatcctgcgaatgaggcacgacgtcggc
gagtttcccgtccttttcttcggttccaacgactacctgtggacctaccaggctcgggtc
tttccgtacatggaaggagacgccaacagtaaagaaaagatgggaaaaggggtcgactcc
gtttataggaaagctttggacgaggctgctgaaagattccgagaactgcaggcagagaag
gaactccggcagctccaggaggacaggagaaatgacaagaagcctcctccgtacaagcac
atcaaggtgaaccgaccgatcggcaaagtgcagatcattacagccgacctgtccgagatc
ccacgctgcaactgcaaagcgacggacgagaacccctgcggcattgactcggagtgcatc
aaccgcatgctgctctacgaatgccaccctcaggtctgcccggcggaggaaaagtgtcaa
aatcagggcttcaccaagcggcagtactcgcaggtggaaatcttcaggacgttgtctcga
ggctggggtctgcgctgctgtcacgacatcaagaagggtgcatttgtaagcgagtatgtc
ggggaggtaattgacgaggaagaatgccgagctcggatcaagcgggcgcaggagaacgac
atcgggaatttctacctgctcacgctggacaaggaccgtataattgatgctggacccaaa
ggaaaccaggcccggttcatgaaccatagctgccagccgaactgcgagacccagaaatgg
acggtaaacggagacacccgggttggactttttgcactggtggacatcgctgctggcact
gagctgacgttcaactataaccttgagtgtctgggcaacgggaagactgtgtgtaaatgc
ggtgcaccgaactgcagtggcttcctaggtgtaagaccaaagaataaccctcctgctgat
gacaaaggccgcaaactgaagaggaaagctcacgcaaagcgcaagtcacagcaagagctg
accaaggagcgagaagacgagtgtttcagctgtggagacggtggccagatggtttcctgt
aagagacctggatgtccaaaggtttatcacgcagactgtctgaacctgaccaagagacct
gcagggcgctgggagtgtccgtggcaccagtgtgacctgtgtggtcaggagtccgcctcg
ttctgcgagatgtgccccagctcctactgcggggagcaccgtgacggcatgctcttcatc
tccaagctggacggccgtctgtcctgcagcgagcacgacccctgcggacccgagccgcta
gaaccgggcgagatccgtgaatacatcccggaacacgccagcgcctacccagtcaaggct
ttcccgcattatcaaaacccttcctgtgaaaccgggccgatcgaccctgtgtgtcaatcg
tccgacgctttgctgatatcctccagccctccacgcagtccttcgctcgcgatcgcgttt
aacagcgcatactcgcctgtatcctcctatgaggaggaggaaaactcggtggacctggaa
gaggatgtggaagaggacggcgtgagaattctagaggacgcagaagaacacactgggtca
gaaacacggtataaaaggggtctgaaagtcacactgactgtataa
DBGET
integrated database retrieval system
