Clarias gariepinus (North African catfish): 128507702
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Entry
128507702 CDS
T10780
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128507702
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128507702
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GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Zn-C2H2_12
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
128507702
NCBI-ProteinID:
XP_053334744
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Position
19:8021616..8037801
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AA seq
1332 aa
AA seq
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MAPIRIKHVVSFTSEDPKHRVVNLCSAGGESSPWLCSAAERSGLLKAELQLDRASTIAFI
DVGNHGSAFIQVDVGRSSWPIDHPYVTLLPTTTLMSPADSRQGTGKHTVRMFKKGDFLPQ
AAEESWDRLRVTCSQPFNKRNQFGLSFFRVRTADEHTEDLSDNQENPTTKNQSTPDKMWS
IREWISSPPVQHTFFGQKTGEGSPGEPTKNHGKLSRAERMVTAAQSIRRSLHKTSCKDLI
SSSDRQERTQNLQHGSARTPQASRRRLAATQEQASMSSTPKRQRCSTSDITATKKKNNAH
RHSPVKPHVQATLPSKGSLDHPEPPETVCPLCGVSFSPDYLPLHASSCLDSNSNLFMERE
PGLSSSSSFQPSTDELMVPCPLCSFRFPIDSIQQHASTCGDTLWTKNYHICGMMEHLTAE
QWREIVNKKMRFPPELINAIHEGNVSVIHSLLRTGDGIIRQLEDSEDRQWREALNLSIRL
GNEDAMTTLLHGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDVHSFNQAI
FDHSIDDSHFAPGVTPLTLACQKDLYDIVTMLTQKGHIIPWPHKVSCTCLECRNGRQYDL
LKFSLSRINTYRGLASRAYLSITAEDAMLSAFYLSRDLRKLSKREPEFKPQYLALEELCQ
EFAVELLGMCRNQSEVTTILNNCGFEDADSRDELDKHSFEEGIPNLARLRLAVNYNQKQF
VAHPICQQVLSSIWSGNLSGWRGSRTIWKLLVSVGIFLTMPFLCLIYWIAPKSKVGKILK
IPVIKFILHSASYLWFLITLLAESILMEKFRDLSSTRHQTMVHNSIHMIWVAGFFWYECK
EVWIEGLRSYFLDLWNCLDMMVLSMYLASFALRVVILLKGYLLCQSLETMEECWYFTETA
RTDWHQEDPQLIAEVLFAVTSMLSFARLAYILPAQESLGTLQISMGKMIDDMMRFLFILM
IIGTAFLCGINNVYVSYTNATQVGRLNETFQFLFWTMFGDINKQYVDMPDYVLAQFVGRI
LYGIFSLLIVIVLLNMFVAMITNSYQKIEDDADVEWKFARSKLYLNYFREGLTMPVPFNI
IPSPKAFFYLIRKLCCFCNFNSPPDYPPIGSVSNETEDKVSYRNQVIRALVQRYIESARR
EFEEARRKDVGNRITELSKMVGHLHGEMKQIHQTLLDIEENRLNPSERNTSSIIGKYIQG
AKNNFRDFNSIMSSESKSAPLLANVHNPSSKEEIKDSTERIDKAKLEEEGADDEIREQED
TTGDEGTVGEDGDGDKLGEVNSNDQTVVEDETTKMEEGRVNEGKEESLNGSSGSQDTGFG
SEESEFSAGSPE
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaattagaattaaacatgttgtctccttcacgtcagaggacccgaagcaccgt
gtggtgaacctgtgttccgccgggggggagagcagcccgtggctgtgcagtgcagccgag
cggagcggcctcctgaaagccgaactgcagctggaccgcgcctccaccatcgcctttatt
gatgtgggtaatcatggctccgcgttcattcaggtggatgtgggccgttcttcatggcct
atagatcatccttatgtcacattgctgcccactacgaccctgatgagccctgctgattca
cgacaaggcacagggaagcacactgtgcgcatgttcaaaaaaggtgacttcttgccccag
gctgctgaagagagctgggacaggctgagggtcacctgcagtcagcccttcaacaagcgc
aaccaatttggcctgtcttttttccgtgtccgcactgctgatgaacacactgaagacctg
tctgacaatcaggagaacccaactaccaaaaatcagagcacaccagataagatgtggtca
ataagagaatggatctctagtcctcctgtacaacacacattttttggccaaaaaacagga
gaaggctctccaggagaacccacaaagaatcatgggaaactgagcagggcagagcgcatg
gtgacagctgcacagtcaatcaggcgctctcttcacaaaacctcgtgcaaagatttaatc
agcagtagtgatagacaggagaggactcagaacctgcagcatggttcagccaggaccccc
caggcaagcaggagaaggctggcagcaacacaagagcaggcaagcatgtcttctactcca
aaaaggcagagatgtagtacatcagacattactgccaccaagaagaaaaacaatgcacac
agacacagccctgttaaacctcacgtacaagccacattgccatcaaagggcagcctagat
catcctgaacctcctgagactgtatgcccattatgtggagtgtcttttagcccagactac
ctgcctcttcatgcctcctcctgtctagattctaattcaaacttgttcatggaacgagag
cctggattgtcatcgtcatcttcctttcagccaagtacagatgagcttatggtgccttgt
cctctgtgctccttcaggttccctatagactccatccaacagcacgccagtacctgtggt
gacactttatggacaaagaactatcatatttgtggcatgatggagcacctcacggcagag
caatggcgcgagattgtgaacaaaaagatgcgctttcccccggagctcatcaatgccatt
catgaggggaacgtgtctgtaatccatagtttgctcaggaccggcgacggcatcatccgc
cagctggaagactcagaagacaggcagtggagagaagcgttgaacctgtccatccgcctg
ggaaatgaggatgccatgactaccctactacacggggtcaagtttgatttccggcagatc
catgaggctctcttggtggctgttgacaccaaccagccacgtgttgtgaagcgcctcctc
gaccggctcgatcaagagaaaggcaacaagatggatgtgcactctttcaaccaggccatt
ttcgaccattccattgatgactctcactttgcccccggggtgacgccgttaacgctggct
tgccagaaggatctatacgacattgtgaccatgctcacacagaagggccatatcatccca
tggcctcataaggtctcctgtacttgtcttgagtgccggaatgggcgccagtatgacttg
ctcaagttctcgctgtcacgcattaacacctaccgtggccttgccagccgggcgtacttg
tccattactgctgaggatgccatgttgagtgccttttatctaagccgggatcttcgcaaa
ctctctaagagggagccagaatttaagccgcagtaccttgcgctcgaggagctctgtcag
gagtttgctgtggaattgctgggaatgtgccgtaatcagagtgaggtcaccaccatcctc
aacaactgtgggtttgaagatgcagatagccgagatgagctggataaacactcgttcgaa
gaaggcataccaaacctggcccggttacgacttgctgtaaactacaaccaaaaacagttc
gtagcccacccaatctgccagcaagttctttcatctatctggtctggaaacttatctggc
tggagaggcagcaggacaatctggaaactcctggtgtctgtggggatttttctcaccatg
ccttttctgtgcctcatttactggattgcaccgaagtcaaaggtgggaaagattttgaag
attccagtgattaaattcatccttcactctgcctcatacttatggttcctcatcacactc
ttggcagaatcgattctcatggaaaagtttcgggacctgtcttcgaccaggcaccagacc
atggtgcacaactctatccacatgatctgggtggctgggtttttctggtatgaatgtaag
gaggtctggatcgagggcttgaggagttacttcctggacttgtggaattgtctggatatg
atggttctcagcatgtacctggcctcctttgccctgcgagtggtcattctgcttaaaggc
taccttctatgccagtcacttgaaactatggaagagtgttggtactttacagaaactgcc
cgtacagactggcatcaggaggacccccagctaatagccgaagtgctctttgctgtcaca
agcatgctgagttttgcacgtttggcctacatcctgcctgcacaagagtccctgggaacc
ctgcagatctctatgggaaagatgattgatgatatgatgagattcttgtttatattgatg
atcattggtacagcctttctgtgtggcatcaacaatgtctatgtatcttacaccaacgct
actcaagtcggaaggctaaatgagaccttccagttcctgttctggacaatgtttggtgat
attaataagcaatacgtagatatgcctgattatgttttagctcagtttgtaggcagaatc
ctatacgggatcttttcactactgatcgtcatcgtgctgctcaacatgttcgttgctatg
atcacaaactcttaccaaaagattgaggatgatgcggatgtggagtggaaatttgctcgc
tctaaactctatctaaactacttcagagagggactcaccatgcctgttcccttcaacatc
attccatcaccaaaagctttcttttacctaatacgaaaactctgttgcttttgcaacttt
aattcgcccccggactatccgcccatcggctctgtgtctaatgagacagaagataaggtt
tcgtacagaaatcaagtgatccgggctttagtgcagcgttacattgagtctgccagaaga
gagtttgaagaggcgaggcgcaaagatgttggcaaccggatcacagagctgagtaaaatg
gttggacacttgcacggagagatgaagcaaattcaccagacgctgttagacatagaggag
aaccgactgaacccttcagaacgaaacacttcctccatcatagggaagtacatccaggga
gccaaaaacaacttccgtgactttaacagcatcatgtcttcagaaagcaaaagtgccccc
ttgcttgccaacgtccacaatccgagttccaaagaggagataaaagactcgactgagaga
attgataaggctaagctagaggaggagggagcagatgatgagatcagggaacaggaagat
acaacaggtgatgaaggtacggtaggggaggacggagatggtgataaacttggagaagtg
aatagtaatgatcagactgtggttgaagatgaaacgacaaagatggaagaagggagagtc
aacgaagggaaagaagaatcactgaatggcagcagtggctctcaggacacagggtttggt
tctgaggaatcagaattctccgctggtagtcctgagtaa
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