Clarias gariepinus (North African catfish): 128507707
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Entry
128507707 CDS
T10780
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04510
Focal adhesion
cgar04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128507707 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128507707 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
128507707
NCBI-ProteinID:
XP_053334748
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Position
19:20927427..20968131
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AA seq
1107 aa
AA seq
DB search
MSGKIESKHDSQRSHISTFTMKLMDKFHSPKIKRTPSKKGKQSAPEPTVKSTEKPVNKKV
SRLEEQEKEVVSALRYFKTIVDKMSVDTKVLQMLPGSASKVLEAILPLMQVEARIQHSSA
VSSCHNRVYQSLANLIRWADQVMLEGIDLDDKETVATVTAVIKAVLDGVKELVKLTIEKH
EQPSPTSPSKPALPVAKVESMCEMPLTEREKEILSKTTPPDSLTNISEEEVAPPKPPLPG
LKLAEHRSRMQSCFSPVVTEIPPALPPKKRQSASSPTRIAVVAPMSRTNCGLNLQHGALK
QQQEYEVELLQRRFSGGSQSYGGDSPRLSPCSIMGKLSKSDEQLSSLERDSGQCSRNTSC
ETLDNTDGYDPDYDFLHQDLSVSEPLPFPTVHSSCLSPLPESLSETPVTSPGPAQPRFSA
PVAPLSAAGTSNGEQPPALPQKKRRSVPILSSCQLYEFRPSDEDTPTSLVTPTLTNGTEQ
HSSPSDSPPPLPEKKSRTILQYMQFVEDYSEPQPSVFYQTPQSERIYEQRRNKRFQEVYG
SNEGYETPPPPALPPKQRQLASHTSSPSSSSSSSLSLLPPSTGVPEEAESAIGLSLSVSN
SFLSGHASLTTPTSESANDEGVEGEGEYVNLYSTSQANGEGTHHTCLSHLQDPLTPCDVI
HDSTVHIPPPKEGCKEAFAKERLKTADSSHVKEEVDELSLVDHKEIMSRITLKAEGDDGP
DVRAGSSDILLVHATETDRKDLVLYCEAFLTTYRTFITPEDLIKKLHYRYTHFCHSPDTF
KKRVSKNTFFVLVRVVDELCVVELTEDILRQLMDLVFRLVCNGELSLARVLRKNILDKVE
QKRMLQHTHILQPLAARGVSARPGTLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKE
QNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYL
AILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALADVEPPCIPYLGLILQ
DLTFVHLGNPDLIEGKVNFSKRWQQFNILDSMRRFQQVHYELRRNDDIVAFFNDFSDHLA
EEALWELSLKIKPRNITRRRTERDEKT
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagcaaacacgactctcaaaggtctcatatctccacattcacc
atgaagctgatggataagttccactcgcccaagatcaagcgcactccctccaaaaagggc
aaacagagtgctccagaaccgactgtcaagagcacagagaaacctgttaacaagaaggtg
agccgcctggaggagcaggagaaggaggtggtgagtgcactgaggtacttcaagaccatc
gtggacaagatgtcggtggacaccaaagtgctccagatgctgcctggctcggccagcaaa
gtcctagaggccattctgcccctcatgcaagtggaggcaagaatccaacacagttctgcc
gtatcatcctgtcataatcgtgtttatcagagtttggcgaatctcattcgctgggccgac
caagtgatgctggagggcatcgacctagacgacaaagaaaccgtagcaactgttactgcg
gtgataaaggctgttctggacggagtaaaggagttggtcaaactcaccatagaaaaacac
gagcagccttccccaacatcacctagcaagccagcgctccctgtggccaaagtagagagc
atgtgcgagatgcctctaactgagcgggaaaaggagatcctcagcaagaccacgcctccg
gatagcttgacgaacatctcagaagaggaagtagcgccgcccaaacctcctctacctggg
ttaaaattagcagagcacaggagcaggatgcagtcatgcttcagtcctgtggtgacggaa
atcccccctgctctgcctccaaagaagcgccagtctgcctcctcgcccactcgcatagcc
gtggtagcacccatgagtagaacgaactgtggcctcaacctgcagcatggagctctcaaa
cagcagcaggagtatgaggttgagctactacagaggcgtttctccggcggcagccaatca
tacggcggggattcacctcgcctctcgccctgcagcattatgggaaaactgagcaaatca
gacgagcagctttcctcactggagagggacagcggccaatgctcacgcaacactagctgt
gagacgctcgataacacagacggatacgaccctgactatgacttccttcatcaagacctc
tcagtgtccgagcctttgccatttcccacggttcacagcagctgcctgagtcctctccca
gaatccctcagtgagacccccgtgacgtctcctggcccagcacaaccccgtttcagtgcc
cctgtagccccactcagcgctgcgggaacttccaacggagaacagccccctgcacttcca
cagaaaaagaggcgatctgttcccatcctgtcatcctgccagctctacgaattccgtccc
tctgacgaggacacgcccacttcactggtcacgcccactttgaccaatggaactgaacag
cactcgtccccgagcgacagccctccacctctgccagagaagaaaagcagaacgatcctc
cagtacatgcagtttgtggaggattactcagaaccacagccatccgtcttctatcagacg
cctcagagcgagagaatctacgagcagcgcaggaacaaacgattccaagaagtttatggg
tccaacgagggctacgagactccgccccctccggccctgccacccaaacagcgacagctg
gcatctcacacttcctctccctcctcctcttcttcctcctctctttcactcctccctccc
tccactggcgttccggaggaggcggagtctgctatcggcctcagcctgtctgtgtctaac
tccttccttagtggccacgcctctttaaccacaccaacgagtgagagtgcaaacgatgaa
ggtgtagaaggagaaggagagtatgtgaacctgtactctacctcgcaagctaatggagaa
ggcacacaccacacatgtttgtctcatctacaggacccgctcacaccctgtgatgtaatt
catgactctactgttcacatacccccacccaaggaaggatgcaaggaagcttttgccaag
gagaggttgaaaacagcagactcgagtcatgtcaaagaggaggttgatgagctttctctg
gttgatcacaaagagatcatgagtcgcatcactcttaaagctgagggggacgatggccct
gacgtcagagccggctcgagcgatattcttttagttcatgctacagagacagatcgcaaa
gatctggtgttatactgtgaagcttttctaactacatatagaaccttcattactcctgaa
gacctcattaaaaaactacattatagatacactcatttctgccatagtccggacacattt
aagaagcgcgtcagtaagaacacattcttcgtgctggtgcgggtggtggacgagctctgt
gtggtggagttgacagaggacatcctcaggcagctgatggatcttgtgttccggctggtg
tgtaacggcgaactgagtctagctcgagtccttcgcaaaaacattctggataaagtggaa
caaaagaggatgctgcagcacacacacatcctccaaccgctagcagcacgaggggtgtct
gccaggccaggcacactgcatgactttcgcagccatgagatcgctgatcagctcaccctt
ctggatgcggagctcttctacaagatcgagattccagaggttcttttgtgggcgaaggag
cagaatgaggaaaagagtcccaatctgactcagtttacagagcactttaacaacatgagc
tactgggtgcgctccataatcatccagcaggagaaagctcaggacagagagaaacttctg
ctcaaattcatcaagatcatgaagcacttgaggaagctgaacaactttaattcgtacttg
gccatcctgtcagcgttggactccgctccaatcaggaggctcgagtggcagaaacagacg
tctgagggattggaggaatactgcaccttaatcgatagttcatcctctttccgagcttac
agagcagcactggctgatgtggagcctccctgcattccttacctcgggttgattctgcag
gacctgaccttcgtgcatttaggaaatccagacctgatagaagggaaagtgaacttctcc
aagcgctggcagcagttcaacatcctggacagtatgaggcgctttcaacaagtacactac
gagctgaggaggaacgacgacatcgtggcgttcttcaacgacttcagcgaccacctggct
gaggaggcattgtgggagctttcactgaagatcaaaccacgcaacatcacacgccgccgg
actgagcgtgatgagaaaacctag
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