Clarias gariepinus (North African catfish): 128507835
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Entry
128507835 CDS
T10780
Symbol
fbxo40.2
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128507835 (fbxo40.2)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128507835 (fbxo40.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
128507835
NCBI-ProteinID:
XP_053334935
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All DBs
Position
19:11223816..11228293
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AA seq
701 aa
AA seq
DB search
MSRYRRSTPTSSKRLHRHCESCYSKYCKAPIELSVSCMIINCRLLCGASFHMCKEDEHIM
LCPKEKVPCINAHYGCPFTMCRSKTAKHLEVCPASVVVCSMEWNRWPIEDVQSPLFTNVM
KDIHEPQALDLSTALRDQKQICSRLKLRSFFPQLMQEPEEPIPAEAEYEEAGDDFLVNGT
HVNCMSDEVSINGPVSVQPEESVGKDLTVYKDKYELYEKMFSKERGGCAQSQEEESNSGG
KKDRTEPTKSSNNPYTTDQGATLAPVEEQHGEDDVQPDISKTGLAPWQEGVLERLGQEVN
PREYHMYVVHHGRMLLAFGQIEACTPREKDFVYGSLEPIPVQTLRSFNVPVSYRHKRIQY
KDPSTRVPTEHRSVDTSDLGLSSEEEFKKMDEMFATLLCAAEVEIRGHKISESMATDGLY
FDIGTQTYDFLEAPFKYNATLADIKEDRDLKLYLQMDTESVTLRHNKSTSMFTFMCEHFF
RRDEFASHFKNVHSDIQSCLNGWFEQRCPLAYLGCTFSQRRLQPSTHKATVFFNQELSIF
TLRPDSATPFMADPHGVPPQQTQVGYEDSLSNLPFEVLRQIARYLDSFSLSQLALVSRLF
RDVSATFLHERGMVSLKWRKKLYSHGGAKWKSSLVWEFSSLFSRVGSWCIDDVLPMAEHL
KHCPFYQTEPKTKPFQLTSIRKANKDLKNRKSLVTQFMGQS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagcagatataggaggtctacgccaacatcaagcaagaggctgcacaggcactgtgaa
agctgctacagcaaatactgcaaagctcccatagagctctctgtgtcatgcatgatcatc
aactgccgcttgctgtgcggtgcctcatttcacatgtgcaaagaggatgaacacataatg
ttgtgtcctaaggagaaagtaccatgcattaatgcccactatggttgccctttcaccatg
tgtcgctcaaagacggccaaacacctggaagtgtgtcctgctagcgtggtggtctgctca
atggagtggaaccgctggcccattgaggatgtccagtcacctttatttactaacgtgatg
aaggacatccatgagccacaagctctagacctgtccacagctctaagagatcagaaacaa
atatgcagcaggctaaaactgagaagcttctttcctcagttgatgcaggaaccagaagaa
cctattccagcagaagcagaatatgaggaggcaggggatgattttttggttaatggtacc
catgtgaattgcatgagtgatgaggtctcgataaatggtcctgttagtgttcagccagag
gagtctgttggaaaagatctcactgtgtataaagacaaatacgaattatatgagaagatg
tttagcaaggagagaggtggctgtgcacagtcccaggaagaggagtcaaattcaggaggt
aaaaaagacaggactgaaccaactaaaagttcaaataacccatatacaactgatcaagga
gctaccttggcaccagtagaagagcagcatggagaagatgatgtccaaccagacatctct
aaaactggccttgctccttggcaagaaggagttctggaaagacttggccaagaagtaaat
ccaagagagtaccacatgtatgtcgtgcaccatggacgtatgctgcttgcctttggccag
atagaagcttgtactcccagagagaaagattttgtttatggaagcctagaaccaatacca
gtccaaactcttcgttcttttaatgttcctgttagttaccggcacaaacgcatccagtat
aaagatccttccactcgagtgcccactgagcacaggagcgtggacacttctgatttgggt
ttgtcttcagaagaggaatttaaaaaaatggatgaaatgtttgcaactttgttatgtgct
gcggaagtagagatcagaggtcacaagatcagtgaatccatggccacagatggactttat
tttgatattgggactcagacatatgactttctcgaagctccatttaagtacaatgccact
ctcgctgatattaaagaggacagggatttgaaactttatctgcagatggatacagagagt
gtaacacttaggcacaacaaatccacttccatgttcacatttatgtgtgaacatttcttt
agaagggatgagtttgcgtctcactttaaaaatgtgcactcagatatccagtcttgtttg
aacggctggtttgagcaaaggtgtcctctggcttacctgggctgcaccttcagccagaga
cgactccagccctctacacacaaagctacagtcttctttaaccaagaactcagcatcttc
accctcagacctgatagtgccacaccgttcatggctgatccacatggggtcccaccacag
caaacacaagttggatatgaagattcacttagtaatcttccttttgaggtgctgcgtcag
atcgccaggtacctggatagcttctctctttcccagctggccctggtctccaggcttttc
cgagatgttagtgctacattcttgcatgaaagaggaatggtaagcttgaaatggaggaaa
aagctgtactctcatggtggagccaagtggaaatcatccctagtttgggagttcagcagt
ctattcagcagagtgggcagctggtgtattgatgacgttcttcccatggccgagcacctt
aagcactgtccattttaccaaacagaacccaaaaccaagccatttcaactgaccagcata
aggaaagccaataaagatttaaagaatcggaaaagtctagtcacacagtttatggggcaa
agctaa
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