Clarias gariepinus (North African catfish): 128507855
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Entry
128507855 CDS
T10780
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128507855
04082 Neuroactive ligand signaling
128507855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128507855
Ion channels [BR:
cgar04040
]
Ligand-gated channels
GABA-A
128507855
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
128507855
NCBI-ProteinID:
XP_053334957
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Position
19:complement(536716..677226)
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AA seq
481 aa
AA seq
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MAGGPKKLAALVSCVWVFLMLLEPSLQNGAVAGHREPLPDDSKDNITIFTRILDRLLDGY
DNRLRPGLGESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLPL
NNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDF
PMDAHACPLKFGSYAYTNNEVVYIWTADDEKSVSVAPDGSRLNQYDLLGHVIGKETISSS
TGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGQKEIQDL
RRNDSVTFSKKTNNTFNIVGTTYPMSVGKDPGLTTIAKSASGTASAPTQTQTQTQPVREV
RLSRMDGEYICEGVKKSYNRVSKVDKISRIIFPVLFFIFNLAYWATYVNRKPTIRRSNTQ
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggctggcggtcccaagaagcttgccgctcttgtgtcgtgtgtatgggtattcctaatg
ctcctcgaacccagccttcagaacggggccgtagcagggcaccgagagcctcttcctgat
gacagcaaagacaacatcaccatttttactcgaattctggaccgcttgctggacggctac
gacaacaggctgcgccctggtttaggagagagcgtgactgaagttcgaaccaacatctac
gtcaccagtttcggaccggtatcagacacagacatggaatacaccattgatgtgttcttc
cgacagagctggagagatgagaggctaaagtttgacggccccatgcaggttctcccactc
aacaaccttctggccagcaagatctggactcctgataccttcttccacaatgggaaaaag
tctgtggctcacaacatgacgactcctaataaactcctgcggctggtggacaacgggacc
ctgctgtacaccatgagattaactattcacgctgagtgccccatgcacctggaagatttt
cccatggatgctcatgcctgcccgctcaagttcggaagctatgcgtacaccaacaacgag
gtggtctacatctggaccgcagacgatgagaagtcggtgtctgtggctccagacggctcc
cgtctcaaccagtatgacctgctgggacacgtcataggcaaagagaccatcagctccagc
acaggagaatatgtggtgatgacaacttattttcatctgaaaaggaaaatcggctatttt
gtcattcagacgtatttgccctgcatcatgacagtcatcctttcccaggtctcgttctgg
ctgaaccgggagtcggtgccggctcgtactgtcttcggagtcacgaccgttctgaccatg
accacgctaagcatcagcgccagaaactctcttcccaaagtggcctacgctacagctatg
gactggttcatggccgtgtgttacgccttcgtcttctccgccctcatcgagtttgccacc
gtcaactatttcaccaagcgcagctgggcctgggatggtcagaaggagatccaggacctg
aggagaaacgattcagtgactttctccaaaaagaccaacaacacctttaacatcgtaggc
accacctacccgatgagcgtcgggaaagatcctggactcaccaccatcgccaagagcgct
tccggcaccgcctcggcccccacccagacccagacccagacccagccagtccgagaggta
cgtctctccagaatggacggcgagtacatctgcgaaggcgtcaagaagtcctacaaccgc
gtcagcaaagtggacaagatctcacgcatcatctttcctgtgctcttcttcatcttcaac
ctggcctactgggccacttacgtcaacaggaagccgaccatcaggaggtccaacacgcaa
aactaa
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