Clarias gariepinus (North African catfish): 128507975
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Entry
128507975 CDS
T10780
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03030
DNA replication
cgar03410
Base excision repair
cgar03420
Nucleotide excision repair
cgar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128507975 (rfc2)
03410 Base excision repair
128507975 (rfc2)
03420 Nucleotide excision repair
128507975 (rfc2)
03430 Mismatch repair
128507975 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgar03032
]
128507975 (rfc2)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128507975 (rfc2)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128507975 (rfc2)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128507975 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
128507975 (rfc2)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128507975 (rfc2)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128507975 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
128507975 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Mg_chelatase
Viral_helicase1
AAA_24
AAA_11
Rad17
RuvB_N
AAA_19
nSTAND3
AAA_18
MipZ
AAA_assoc_2
AAA_5
ABC_tran
AAA_28
AAA_23
AAA_25
AAA_30
MeaB
DNAX_ATPase_lid
NTPase_1
RNA_helicase
SLFN-g3_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
128507975
NCBI-ProteinID:
XP_053335137
LinkDB
All DBs
Position
19:9237302..9247282
Genome browser
AA seq
353 aa
AA seq
DB search
MDVEMKEADGDKSQTDAQSNKNEEATKSSTGSYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDEQIMMRLMEVVEKENLHTTNDGLEAVIFTAQGDMRQALNNLQSTHS
GFGFINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIISQLWSLGYSPEDIIGNIFR
VCKTFQMPEYLKLEYIKEIGYTHMKIAEGVNSLLQLAGLLGRLCSKTAAPEAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagatgaaagaagccgatggcgacaaaagtcaaacagacgcacagagtaat
aaaaatgaagaggctacaaagtcttcgacgggctcttacgagctcccatgggttgagaag
tacagaccactgaagctgaatgaaatagttggaaatgaagaaactgtgagcagactggag
gtgtttgcaagagagggaaatgttcccaacatcattattgctggacctcctggaactgga
aaaacaacaagtattttgtgtttagcaagagcgcttctgggcccagcgatgaaggacgct
gtgctcgagctgaatgcctcaaatgatcgaggtattgacgttgtccgaaacaagatcaag
atgtttgctcagcaaaaagtgactctccccaaaggacgtcacaaaatcatcattctggat
gaagctgatagcatgacagatggagcacagcaagctctgagaagaacaatggagatctat
tctaaaaccaccagatttgctttagcctgcaatgcatcagataaaattatagagccgatt
cagtcgcgctgtgcagtcctgcgctacagtaagctgagggatgaacagatcatgatgcgg
ctgatggaggtggtggagaaggagaacctgcacaccaccaacgatggactagaggcagtt
atcttcaccgctcaaggagacatgagacaggcattaaacaacctgcagtccacgcattct
ggatttggttttatcaacagtgaaaatgtgtttaaggtatgtgatgagccacaccccctg
ctggttaaaagcatgcttgaacactgtgtcaatgccaacattgacgaggcctacaagata
atatctcagctttggtcactcggctactctcctgaagatataatagggaacatcttcagg
gtctgtaagaccttccagatgccggagtacttgaagctcgagtatatcaaggagattggc
tacactcacatgaagatagcagaaggagtaaactctctgctccagcttgcaggactttta
ggacgtctctgcagtaagactgcggcacccgaggccagctga
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