Clarias gariepinus (North African catfish): 128508001
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Entry
128508001 CDS
T10780
Symbol
zbtb16a
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128508001 (zbtb16a)
04121 Ubiquitin system [BR:
cgar04121
]
128508001 (zbtb16a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
128508001 (zbtb16a)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128508001 (zbtb16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_15
zf-C2H2_8
zf_UBZ
Endonuclease_7
zf-C2H2_16
MIX
Zf-C2H2_ZNF451_C
zf-C2H2_REST
Zn_SUZ12
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
128508001
NCBI-ProteinID:
XP_053335170
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All DBs
Position
19:10775284..10879452
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AA seq
671 aa
AA seq
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MDLTKMGMIQLQNPNHPTALLHKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE
ILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLK
ILETIQSSDENDAEVNMNDGGTEEDDEHKGRHGRSTAGSKKHSMDDSGYVSTAQQALALS
GIIDQSPSVSTSFGLSTMSPTKAAVDSLMSIGQSLLQSSMQHGLGSDQALLGNPHSIMTE
IKTEMMQVDDANGRESPRAMESSTSSNGDRNSDGDKSRDGPGTPTRSSVITSARGLQYVR
EDGGVDHPIEASQMGLEGMQGMTEKHLVSLYGLPHNHKSEALLSMPASMASTLHMSPALA
MSMDFSTYGSLLPQSFIQREFFNKLGELAAGMKPDGRGGQNERCNVCGAELPDNEAVEQH
RKLHSGMKTYGCELCGKRFLDSLRLRMHLLSHSAGEKAIVCDQCGAQFQKEEDLEAHRQI
HTGSDMAIFCLLCGKRFQTQTALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTG
DHPYECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPF
ECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSTMQKHMKGHKPEDIPPDWR
IEKTYLYLCYV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggatctgactaaaatgggtatgatacagctccagaaccccaaccaccccactgcgctg
ctgcacaaggccaatcagatgcgcctggccggtacgctgtgtgatgtggtcatcatggtg
gacagccaggagttccacgctcaccggacagtactggcatgcaccagcaagatgtttgag
atccttttccatcgcaacagccagcattataccctcgattttctttcgccaaagaccttc
caacagattcttgagtatgcttacactgccacgcttcaagcaaaagtggaagacttggat
gacctgctgtatgcagcagagatactcgagattgagtatcttgaggagcaatgcctgaag
attttggagaccatccagtcttcggatgagaatgatgcggaggtcaacatgaacgacggt
ggtacggaggaggatgatgagcacaaagggaggcatggcaggagcactgccggctccaag
aagcattccatggatgatagcggctacgtgtccactgcccagcaagcgttagcactgtca
ggcatcatagatcagagcccatctgtctccacttccttcggtctctccacaatgagccca
accaaagctgcagtggacagcctgatgagcattggccaatctcttttgcagagcagcatg
cagcatggtctgggcagtgatcaggccctcctgggcaaccctcactctataatgacagag
attaagacagaaatgatgcaggtggatgatgctaatggtcgtgagagccccagagctatg
gagtccagcacctcgagcaacggtgaccgcaatagtgatggcgataagagccgtgatggg
cctggtacccccaccagaagcagcgtaatcaccagcgcccgtgggttacagtatgtccgt
gaggatgggggggtcgatcaccccatcgaggccagccagatggggctggaaggtatgcaa
ggtatgactgagaaacatctggtctctctgtatggcctgccacacaaccataagagtgag
gccttgctctccatgcctgcctccatggcctcaaccctgcacatgtccccagctctggct
atgtccatggacttcagcacctatggcagtctcctgccacagagcttcatccagagggag
ttcttcaacaagttgggcgaactagcggctggcatgaagcctgacggacgcggtgggcaa
aatgagcgctgtaacgtttgcggtgccgaactgcctgacaacgaagctgtggagcagcac
aggaagctgcacagcggaatgaagacctacggctgtgagctgtgcggcaagcgcttccta
gacagcctacgcctgcggatgcacttgctgtctcactcagccggagagaaggccatcgtg
tgtgaccagtgtggagctcagttccagaaagaagaagacctggaagcacacagacagatt
cacacaggatcagacatggccatcttctgtctgctctgtgggaagcgcttccagacgcag
acggccctgcagcagcacatggaggtccacgctggggtccgcagctacatctgcagcgag
tgcaatcgcaccttcccgagccacacggcactcaaacgccaccttcgctcccacacaggt
gaccatccgtatgagtgcgagttctgcgggagctgtttccgtgatgagagcacgctgaag
ggccacaagcgcatccacaccggagagaagccctatgaatgtaatggctgcggcaagaag
ttcagcctcaaacaccagctggagacccattaccgtgtgcacacaggtgagaagcctttc
gagtgcaagctgtgtcaccagcgctcgagggactactcagccatgatcaaacatctgcgc
acccacaacggcgcctcgccctaccagtgcaccatatgcctggagtactgccccagcttg
tccaccatgcagaagcacatgaagggtcacaagccagaggacatcccaccagactggagg
atcgagaagacctatctgtacctgtgctacgtctga
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