Clarias gariepinus (North African catfish): 128508032
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Entry
128508032 CDS
T10780
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128508032 (sec16a)
Membrane trafficking [BR:
cgar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128508032 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
128508032
NCBI-ProteinID:
XP_053335200
LinkDB
All DBs
Position
19:19804667..19833180
Genome browser
AA seq
2173 aa
AA seq
DB search
MQPLPTTVPPGACGTSPPPPPPTSGGSNVFRRNRPHKHGALAPNAASTPPPQPLTDPFAF
GRQGSPSARVSNQTPPLNSSPLPMQAPLTAGFNQSDPPQGPPSGAQVPITGPVQTFFTPQ
PGPSGLPLASNPRSAEPGYFSSQEPMPYIAQLPNSVPLFSSSTMHAPPAASTPPYQSMPL
FQPTAPAPSLSGPDHGSRPPSVQNYFQPTSDTPQPFHAYSQTQAPPPAPLSHQGPFQSQS
QNHSQSTLLNMGEPVMSQQQNSHFPAQTYLSQTGGSSEPWFNQVPQDPLQRSCPVPYSVP
SADPGTMSMFFHGNDVENEETLSGEGHVNGVSHPPQGREVTETLNPRLNETGNVKVTAGP
CDSVENLECVPNQEVLPNELPPSHVYEAGPNLETPDSASRPARSASVSSSYSNISHSSGH
APHSSSSHPPRRHQGVVGTFIQQESPRPPDIPASQPSAGGYFEQIDSAPAPEPSPTFPTP
SPPKPVGVFQASANSSFQPVRSHSVGVRPAEVDRARMVVEKVGGDVLPGNLEQPPDNMET
IYFPGGQDRRPLSRAQGPQRPCDSPTTTLWAQNDAASLGANILLAPAAPLLATTIATSSK
SSTEIIQPPEDGPLDLQPPRVHPQPHSENLEIPLDSASQSNLGYASLLVSTPPTETLNQP
VLIATPSSNYTVISPPMPVQAINQISPKETNVPSQPLSQAQVANQLPISANHPPPLLSQT
PTCFPPPLSQSPLNLAQDAPLAFQPAHPTALKAQSPRSDCQSLPPSNLPLPSSASAINQN
HHSNYELLDFSMHQSQSTSQAPSHAASTPAPVNNAAGFYLQVTKDAQQGARVDSEPPLQP
PTLNPPRAPSNQSNNGPSGPSNPPYPAPQYQHPPQPIPVSQTTQSSAYPPQSGNSTGTHD
PQRPPSVHGYGAQPPMPSGPGFGSYYTEYQNGRNPFPPSYPHVDPRTQNYYQEDPYRRGD
PQYGRYNGPNPGYREADRQPERPSSRTSQYSDRPNSRQEYAEDYPRSNRSAYEDYVNYWK
YMDQNKRYDPNVLYDPRYRSYYEQAYAWYNYDPEAYRRLDPYFGHQYFSSYDHHPRREGF
DDPWRYFPGYDSSFEDDVRRRVPYGDDLDQRSVHSVKSTHSRRSSFSSRSQSQVYRSQPD
LVAASYEPTATTLPGDYSYGQFAEQSDTINYSQYDPTNTTWAAPEQAPPRPLTPEKFSVP
HCCARFGPAGQLIHVQPNLPSAGQPALVEIHSMETMMQDFAEQVELRTFPGPLVKEETHK
VDVIKFAQNKAQECMRNDNLIDKDSAFLIWEFIVLLCRQNGTVVGTDIADLLLKEHRSVW
LPGKSPNEANLIDFTNEALERPEEKGSGPISLLSDTFMGVAENVGKETERFRELLLFGRK
KDALESAMKNGLWGHALLLASKMDNRTHARVMTRFANSLPINDPLQTVYQLMSGRMPASA
TCCGDEKWGDWRPHLAMVLSNLTHALDLDTRTISTMGDTLASKGLLDAAHFCYLMAQVGF
GVFTKKSTKMVLIGSNHSLPFVRFCATEAIQRTEAYEYAQSLGSQPLSLPNFQVFKFIYA
CRLAETGLCAQAFHYCEVISRAILSMPSYHSPVFISQLIQMSERLRFFDPQLKEKPEQEL
FQEPDWLLHLRKLQSQIKEGVIMCTDHSTQPSGCTTPSSEDEAEAPSFPNSDPHNPLMTT
LMSQSGPSMPGVQLVPPAPTTILQDGSLHHESLPNEGIPFNPAAPLPPQPGFIPQFPAEG
QGSYPSIAPQSPKHLPPSMPPHMPMYTPMEMPPQMPPQMPPQMPHQMPPQMPPQMPPQMP
HQMPPQMPPQMPGIDTTPTPPSPQHGHLPSPLSHGGQPPDFYDSMAGMSLGRRSRTTSQS
SLPRTSGRRSRTTSESSTRSTGRERSNSIANQSSPPPPPIPEAPVQEAPTKTRKDSPKKG
GGGGGGGGGFLGWLTRKVRTEAHLPDDKNKSIVWDENKQRWVNLDEPEEESKPPPPPPST
FPKAPMGNMGLGPGMGAPPAGPPVNMFSRKAGTKARYVDVLNPGRRNSNPTPAVAPPADL
FAPLAPMAMPTNLFVPTAAPDDQQPMEGSVPDSNGNTEHIQPNATVPQMFNPTLLPSGRE
GAQSGELSRSSSMSSLSREVSRHLNQVPTELPVQGAPPPGGVTFYNPSQFAQSVPPARSR
PGRLGQREYPTLK
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccccttcctactactgtgccacctggagcatgtggtacatcaccaccaccgcca
ccacctacctctggtggctcaaacgtcttcaggagaaatcgaccacacaagcatggagca
ctggcgccaaatgcagcatcaactccacccccacagccactgactgacccttttgccttt
gggaggcagggctctccatctgcaagagtaagcaaccagactcctcctttaaacagcagt
ccccttcctatgcaagcccctctcacagcagggtttaatcaaagtgatccacctcaaggc
ccaccatcaggagcacaagtgccaataactggtcctgtacaaacctttttcaccccacaa
cctggtccttcaggacttccactggcatctaatccacgttctgcggaacctggctacttc
agctcccaggaaccaatgccgtacatcgcacagttgcctaactctgtccctctttttagt
tctagcacaatgcatgctccccctgcagcctcaacgccaccataccaaagtatgccactg
tttcagcccacagcacctgctccatccctttctgggcctgaccatggcagtcgtcctcca
tctgttcagaactactttcagccaaccagtgataccccacagccttttcatgcgtactca
cagacacaggctcctccacctgccccgttgtcccatcaaggtccatttcagtcacaatct
cagaatcatagtcagtcaaccttactgaatatgggtgagcctgtaatgtcccagcaacaa
aactctcactttccagcccagacctatttaagccagacaggtggttcctcagagccatgg
tttaatcaggttccacaggaccccttgcagcgttcctgcccagttccatatagtgttcca
tctgctgaccctggaacgatgtccatgttctttcatggcaatgatgtagaaaatgaagag
actctttctggagagggccatgtaaatggggtctcccaccctccccaaggcagggaagtt
actgaaacccttaatccccgtttgaatgaaactgggaatgtcaaagtgactgcaggtcca
tgtgactcagttgagaatctggaatgtgttccaaatcaggaagttttgcccaacgaacta
ccgccaagccatgtttatgaggcagggcctaacttggaaacacctgactctgcctctcgt
ccagcacgatctgcaagcgtctcatccagctatagcaatatcagtcacagtagtggtcat
gcccctcacagtagcagcagtcaccctcctcgacgacatcagggagttgttgggacattt
atccaacaggaaagcccccggccccctgatataccagcatcccaaccttctgctggcggt
tactttgaacagatagattctgctcctgctccagagccaagtcctactttccccacaccc
agccctccaaagccagttggggtgttccaggccagtgcgaactcttcctttcagcctgtg
cggtcacacagtgtaggggttagacctgctgaagttgaccgtgctagaatggtagtggaa
aaagttgggggtgatgtcttacctggcaacttggaacagcctccagacaatatggagacc
atctactttcctggaggacaggatcgcaggcctttgtctcgagctcaggggccgcaacga
ccctgtgatagtccaaccacaacactctgggctcagaatgatgcagctagtcttggtgct
aatatacttttggcacctgcagcacctcttcttgctactacaatagctacatcaagtaag
tccagtactgagattatccagccaccagaagacgggcccctggatctgcagcctcctagg
gtacatccacagcctcactcggagaacctagagatcccacttgattcagcttcccagtca
aatttgggctatgcttctttgctagtgtccacacctcccacagagactttaaaccagcct
gttttgattgccacaccctcttctaactatacagtgatctctcctccaatgcctgttcaa
gcaatcaatcagataagtcccaaggaaacaaatgtgccttctcagccactatctcaagct
caagtggcaaatcaattgccaatctcagccaatcatccgcctcctcttttatctcaaacc
ccaacctgttttcccccacctttaagccagagtccgttaaatctggctcaagatgctccg
cttgctttccaaccagcccaccctactgctttgaaggcccaatcaccgagaagtgactgc
caatcgcttccaccttctaatttaccacttccttcatctgcttctgccatcaatcagaat
catcattcaaattatgaactgcttgatttttccatgcaccaatcacagagcacaagtcag
gccccttctcatgcagcttctactcctgcaccagtaaataatgcagctggcttctacttg
caggtcaccaaagatgcgcagcaaggggcacgagtggatagtgagcctccacttcagcca
ccaaccttgaatccccctagagcacccagtaatcagtctaacaatggcccctctggtccc
tctaatccaccatatccagctcctcaatatcaacatcccccacagcctatccctgtttct
caaaccacccaatcctctgcatatcctcctcaatctggtaattctactggcacacatgac
ccccagcgtcccccatctgtacatggatatggtgcccaacctcctatgccttctggccct
ggatttggcagctattatacagagtaccagaacggaaggaatcccttcccaccttcttac
ccacatgtggacccaaggactcagaactactaccaggaagacccttaccgaaggggagat
ccacagtatggccggtacaatggaccaaaccctggttaccgggaggcagaccgacagcca
gagaggccaagttctaggaccagtcagtactctgaccgacccaactccaggcaggagtat
gctgaggattatcctagatctaaccgcagtgcctatgaagactatgtaaattactggaag
tacatggatcaaaacaagcggtatgaccccaatgttctatatgacccccgttatcgaagc
tactacgaacaggcctatgcctggtataattatgaccctgaggcttacaggagacttgac
ccgtattttggccatcagtatttcagcagttatgaccatcaccccagacgtgaaggcttt
gacgacccatggcgttactttcctggctacgattcgagttttgaagatgacgtccgccgt
agggtcccatacggagatgatttggaccagcgctctgttcacagtgtgaaatcgacgcac
agccgtcggagcagcttcagctcccgctcacagagtcaggtgtacaggagtcagcctgat
cttgttgctgcaagttatgaaccgaccgcgaccacactgcctggagattattcctatggt
cagttcgccgagcagtcagacaccataaattacagccagtatgatcccacgaacaccacc
tgggctgctcctgaacaggctcctccaaggccgttgactccggagaagttctcagtccct
cactgctgtgctcggtttgggccagcaggtcagctgatccatgttcagcccaacctgccg
tcagctggccagcctgcccttgtcgagattcatagcatggagacaatgatgcaggatttt
gcagagcaggtcgagttacgcaccttcccggggccacttgttaaggaggaaacccataag
gtggatgttataaagtttgcccagaacaaagctcaggagtgcatgcgcaatgataacctc
attgacaaggactctgcattcctcatttgggagttcattgtgctgctgtgtcgtcagaat
gggacggtcgttggcacagacattgccgatctcttgctgaaggaacatcgttccgtgtgg
ctgccaggaaaatcgcccaatgaggcgaatctgattgactttaccaatgaggcactggaa
cgtccagaggagaaggggtctgggccgatctcgctcctatcagacaccttcatgggcgtg
gctgagaacgtgggcaaggagacggaacgattccgagagctgctgctctttgggcggaaa
aaggatgcgctcgagtccgctatgaagaacgggctttggggacacgccctcctcctagcc
agtaagatggacaacaggacacatgcaagagtcatgacgaggtttgccaacagtctcccc
attaacgatccactgcagacagtctaccagctcatgtcaggaaggatgccagcttccgct
acatgctgtggagatgagaagtggggcgactggcgccctcacctggccatggttctttcc
aacctcactcatgctctcgacttggacacgcgcaccatctcgaccatgggagacacgctg
gcttctaaaggtctgcttgatgctgctcatttctgttacttgatggctcaggtgggtttt
ggcgtctttaccaagaagagcaccaagatggtcctcattggctccaaccacagtcttcca
tttgtgagattctgtgctacagaagcgatccagaggaccgaagcgtacgagtatgcacag
tcacttggttcccagcctctttcactgcccaacttccaggtgtttaagttcatctatgcg
tgccgtctggcggagacggggctttgcgcccaagcatttcactactgcgaggtcatttcg
cgtgcaattctgtccatgcccagctaccattctcctgttttcatcagtcagcttatacag
atgtctgagcgattgaggttttttgacccccagttgaaggaaaagccagagcaagaactc
tttcaggagcctgactggctgttacacttaaggaaactccagagccagatcaaggagggt
gtgataatgtgtacagatcacagtactcagccatctggttgcactacaccaagctcggag
gatgaagctgaagctccatcttttccaaactctgaccctcacaaccctctcatgaccacc
ctaatgtcccagtctggcccatccatgcctggggtgcagcttgtgccaccagctccaacg
actattttgcaagatggttctctgcaccacgagtctttgccgaatgagggtatcccattt
aacccagcagcccctcttccaccccaacctggctttatccctcaattcccagctgagggc
caggggtcatacccatccattgcaccccagagtcccaagcacttgccccctagcatgcct
cctcatatgcccatgtacacaccaatggagatgccccctcagatgccccctcagatgccg
cctcagatgccccatcagatgccgcctcagatgccccctcagatgccccctcagatgccc
catcagatgccgcctcagatgccccctcagatgcctggcatagacactacacctactcca
ccatctccgcagcatggacatctaccgtctccactttcccatggtggtcagcctcctgac
ttctatgacagcatggcagggatgagcttaggaaggagatccagaaccacatctcagtct
tcactgccccggacgtctggacgtcgctctcgcactacgtcagagtcgtccactcgttcg
acgggacgagaacgcagcaactctatagccaatcagagctctcctcctcctccaccgata
ccagaggctcctgtccaggaagcacctacgaaaaccaggaaggactcgcccaaaaaggga
ggaggaggaggaggaggaggcggcggcttcttaggctggttgacccgaaaggtcaggact
gaagctcatctgccagatgacaagaacaaatctattgtttgggatgaaaacaagcaaaga
tgggtgaatctcgatgaaccagaggaggagagcaagccaccaccccctcctccctccaca
tttccaaaagctccaatgggtaacatggggctcgggcctggcatgggcgcaccccctgca
gggccacctgttaatatgttctccaggaaagcaggcactaaggctcggtatgtggacgtg
ttgaatcctggccggcgtaattccaaccctacacctgctgttgctccgcccgctgatctc
tttgctccacttgcacccatggctatgccaacgaacctcttcgttcccactgcagcacca
gatgaccagcagccaatggagggaagtgttccagacagcaatggaaacacagaacacatt
cagccaaacgcaacagttccacagatgttcaacccaactctcttgccctcgggtcgagaa
ggtgctcagtcaggagagctctcacgttctagttcaatgagttctttatcacgagaagtg
agtcggcatttaaaccaggtccctacagaattacctgtccagggagctccaccccccggg
ggcgtgactttctataacccctcccagtttgcacagtctgtgcctccagctcgttcccgt
ccaggccggttgggacagcgcgagtacccgacactgaaataa
DBGET
integrated database retrieval system
