Clarias gariepinus (North African catfish): 128508036
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Entry
128508036 CDS
T10780
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128508036 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128508036 (rbm22)
Spliceosome [BR:
cgar03041
]
Complex B
Other components
Prp19-related factors
128508036 (rbm22)
Complex C
128508036 (rbm22)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
RRM_occluded
Torus
Nup35_RRM_2
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RRM_3
RRM_YTH1
zf-CCCH_10
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
128508036
NCBI-ProteinID:
XP_053335206
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All DBs
Position
19:4097544..4107390
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AA seq
426 aa
AA seq
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MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEMPRSDVNKEYYTQN
MEREIANSDGTRPVGALGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECRRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLKRASTMPRLDPPDDKSITTLYIGGLA
DTITDSDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQSAEMAAEKSFNKLIVHGHRLNV
KWGRSQAARGKDGEKEGVTESGIRLEPVPGLPGALPPPPVSTDDISANYFNLAPNPGPAV
MNLGIPPPPGVAMPPPPGYAPPMYPSMDPMAPPMPPPMAMRPPGQVHYPSQDPLRMGAHA
SRHGGS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttccttaggctctaacacgtataacagacagaactgggaggactcggacttc
cctattctgtgtcagacatgtttgggagagaatccatacatccgaatgaccaaagaaaaa
tatggcaaagagtgcaagatctgcgcccgtcccttcaccgtgttccgctggtgtcccggg
gtcaggatgcgctttaagaagactgaagtgtgtcagacctgcagtaagatgaaaaacgtt
tgtcagacctgcctgctggacctggagtacggtttacccattcaggtcagagacacagga
ctgtctgttaaagatgagatgccacgatcagacgtgaacaaggagtattacacccagaac
atggagcgagagatcgcgaactcggatggcacacggccagtcggcgcgctgggtaaagcc
cccagctctagtgacatgctattgaagctagctcgcaccactccttactacaagaggaac
agacctcacatctgctctttctgggtaaaaggagagtgccgtagaggagaggagtgtcct
tacaggcatgagaagcccacagatccagatgacccgctggctgatcagaacattaaagac
cgctactacggcattaacgacccggtggctaataagctgttgaagcgagcctccaccatg
cctaggttagacccacccgatgacaagtccatcaccacactatacatcggaggcctcgca
gataccatcacagattcagacctcaggaaccatttctatcagtttggggagattcgcacc
atcactgtagtgcagagacaacagtgtgcctttatccagtttgctacgcgtcagtctgcc
gagatggccgcggagaaatctttcaacaagctcatcgttcacggccaccgtctcaacgtc
aagtggggcaggtcccaggcagcacgaggaaaagatggagaaaaagaaggagtgactgag
agtggaatcagactggagcctgtacccggactccctggagcactgcctccaccgcccgtc
tccaccgatgacatctcagccaattatttcaacttggcgcccaaccctggtcctgcggtc
atgaatttagggatcccccctcctcctggtgtagccatgcctccacctccaggttatgct
ccacccatgtacccgtccatggatccaatggcccctcctatgccacctccaatggccatg
aggcctccaggccaggtgcattatccttcccaggatcctctgcgtatgggtgcccacgcc
agtcgccatggaggctcctag
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