KEGG   Clarias gariepinus (North African catfish): 128508092
Entry
128508092         CDS       T10780                                 
Name
(RefSeq) polyadenylate-binding protein 1-like 2
  KO
K13126  polyadenylate-binding protein
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03015  mRNA surveillance pathway
cgar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    128508092
  09123 Folding, sorting and degradation
   03018 RNA degradation
    128508092
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgar03019]
    128508092
   03041 Spliceosome [BR:cgar03041]
    128508092
Messenger RNA biogenesis [BR:cgar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     128508092
   mRNA cycle factors
    Stress granule specific factors
     128508092
Spliceosome [BR:cgar03041]
 Complex C
  Other components
   Complex C specific factors
    128508092
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 128508092
NCBI-ProteinID: XP_053335306
LinkDB
Position
19:complement(6465699..6466764)
AA seq 137 aa
MNTKSEKAILYVGALHDHVTESMLFKRFRPAGPIRFIQICRDNKTVSSLIHAYVNFKYRA
DAERAMVKLNYECLMGQPMRIMWAQRHLTRGSTCVGNLFIENVDKSIDSMGLFELFPISK
KDEGYEEEPKGYSFLHF
NT seq 414 nt   +upstreamnt  +downstreamnt
atgaacacaaagtctgagaaggctatactgtatgtgggtgcgctgcacgaccatgtgaca
gagtccatgctctttaaaagatttagacctgcagggcccattcgcttcatccagatctgc
agggacaacaagacagtctcctcactcatccatgcatatgtcaacttcaagtatcgggcc
gatgctgagcgagcaatggtaaagctcaattatgagtgcctgatgggacagcccatgagg
atcatgtgggctcagagacatctgacccggggatctacctgcgtcggaaacctgttcatc
gaaaacgtggacaagtccattgacagcatgggtctttttgaactttttcccatctctaaa
aaggatgaaggttatgaggaggagccaaaagggtacagtttcctccatttttag

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