Clarias gariepinus (North African catfish): 128508161
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Entry
128508161 CDS
T10780
Symbol
ncapd3
Name
(RefSeq) condensin-2 complex subunit D3
KO
K11491
condensin-2 complex subunit D3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128508161 (ncapd3)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
128508161 (ncapd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
PDS5
Adaptin_N
Cnd3
HEAT
HEAT_2
ADP_PFK_GK
Motif
Other DBs
NCBI-GeneID:
128508161
NCBI-ProteinID:
XP_053335346
LinkDB
All DBs
Position
20:4553551..4567017
Genome browser
AA seq
1408 aa
AA seq
DB search
MELMRALQRLKLNAVSRVWVDAVWECEFTDAEPLDSAIEDEIKEDVSVFKEVYTRLLPFS
CDEENVQSVWNVFGENEVSVKSLIAVLASFILGAKSKTSSVEQRRHALQAASLYLLLLRI
PGSVANRVFHQILFDTCLDLVLRCWPQNSGKKRKKDTLKSSQGDGKTGKRPKPPKKVSDE
MEIDEEDEEEEEEVYFSAQDLLGMREDVAGLVRTLLKLLEKFSLRDKPQSADSCVRLFTE
LTNFEPVIGELSFAEKRDVDKLQSLPELAYRGLWLLCSSNHGEGNECRRRVFHRLLYVIL
MMRKERAKPCMLALSQAVCAARDQAILFISHAVDDQTEATLPLLKILVQHICHQMVEKAE
YRASGAQSVGKLVTKMPCQDYAAFVKWLYNYSLNTKVAFRMFALDVVMVLLAQEEREPDE
GLESDLVPYLSHRFLVRSVVYGRRSDVSPTVRAYAMHCLAQCLELPSHNATKWIHELFSS
STSAGSQTTMMTGRSEQTLKRPDTAQKTALTFRTIELSKHKSLGAASRHSTDDGMSRDAT
SIEYQETLALFKQRVSDPKTNVRKCALETIMSLLKHGVITCSLDNLAILSERCRDPAVSV
KKKAMQCLMDLLDALPDNADVQEAWLRGVVPAVMDSESSVQEKALECLNDKIVTHIKSHA
GYRQDNASQRVAWDLLRLMCDKCQDLGRYFSKAFSVWSRQEKFSSTLVNSLIWHTEREQA
APAWLLLSKVAGCCAKINLGTILEAWDNTFRSPVVDVAMTCHILTVLGHVASSLNDDTKS
RIIDDLMAWLKGFTLPLEVISAGVDALFCLGQSDNIKDTMSFLNQFCGELVCVCEAYLST
VLLNERGAENLNEDLLVKHLYTLGVASLHCPAKVQKRVFLLVQSILTTSEQAGAELPGSQ
PLSQFKPSSMPTVVRAHAVITLGKLCLQHEELMLRYVPAFARELEVGTELAVRSNVVVVL
CDLCVRYPNTLSRYISNISACLRDAEPVIREQSLIMLTNLLQEEFVKWKGSLFFRFAAVL
VDPDPSIADLCEYCLVDLLLKKNPLMFSQHFIECIFHFNAYEKHKKYNRFPQTESEKSRF
SLKGLENQGQRFRIYRFLLKHFTDEQRFNITTRISQDVLACFVDSELPLDPEGAELLADV
FDVLSLKEIKLTAMSGPSPGDEAPEDEMAAAKAVLQKKLISQVQKKNFVENVIPMVIALK
NMLEEKRLPVLKHLMAYLQVTMQDYRSEVKELFAADEQLAAEVEYNLKTFEQQKEQEQEL
EQRLGSFMLSPRAKGSAAASPAPGVRATPRPPQAAQRPSNTPKSADALRRRTFAGMLTPT
GQRPSRGVMSSGPAKGVFDGRAISTPQESINELTFGEQFSAICYDGAGAKDSENILHLMS
PEQEAPAPRQWNVESPVVRKSRSKRRPF
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atggagttgatgcgcgcgctgcagcggttgaagctaaacgctgtatctcgcgtttgggtg
gacgcggtgtgggagtgcgagttcacggacgccgagcccctggactccgccatcgaggac
gaaataaaagaagacgtgagcgtgtttaaggaggtgtacacgaggctgctgccgttctcc
tgcgacgaagagaacgttcagagtgtgtggaatgtgttcggggagaacgaggtgtcggtg
aagtctctgatcgccgtcctggccagcttcatcctcggcgctaagagcaaaacgtccagc
gtagagcagagacgacacgcattgcaggccgcctccctctacctgctgctcctcaggatc
ccaggcagcgtcgccaaccgagtgttccaccagatcctgttcgacacgtgcttggacctt
gtgctgagatgctggccgcagaactcggggaagaaacgcaagaaggacacgctgaagagc
tcgcagggcgacgggaagaccgggaaacgccccaaaccaccgaagaaagtctccgacgag
atggagatcgatgaggaagacgaggaggaggaagaggaggtctatttctcggcccaggat
ctattgggtatgcgtgaggacgtggccggactcgtgaggacgctcctcaagctgctggag
aagttttcgctcagggacaaaccgcagagcgccgacagctgcgtccggttgtttaccgaa
ctcaccaacttcgagccagtcatcggagagctgtcctttgccgagaagcgtgacgtggac
aaacttcagagcctccccgagctggcgtatcgtggcctgtggctgctttgctcctccaat
catggtgaaggaaacgagtgtcgtaggcgtgtgttccaccgcctgctgtacgtcatcctg
atgatgaggaaggagagagccaagccgtgtatgctcgctctgtcgcaggccgtctgcgcc
gccagagaccaggccatcctcttcatcagtcacgctgtggacgaccagacagaggcgacg
ctgccgctgctaaagatccttgtacagcacatctgccaccagatggtggagaaggcggag
tatcgtgccagcggcgcccagtccgtcgggaagcttgtgaccaagatgccttgccaggat
tacgctgctttcgtcaagtggctgtacaactactctctgaacaccaaggtggccttccgg
atgttcgccctggatgtggtgatggtgctcctggcgcaggaggaacgggagccggacgag
ggtctggaatctgacctggtgccgtacctgtcacaccgctttctggtgcgcagcgtggtg
tacgggcggcgctcggacgtctcgcccacggtcagagcgtacgccatgcactgtctcgct
cagtgtctggagctgcccagccacaacgccaccaagtggattcacgagctcttctcctcc
tccacctcagctggttctcagaccacgatgatgaccggacgctccgagcagactttaaag
agaccagacacggctcaaaaaacagcgctgaccttccgcaccatcgagctgtccaagcac
aagagccttggagctgccagccgacacagcactgatgacggcatgagccgcgatgccacc
tccatcgagtatcaagaaaccttggctctgtttaaacagcgtgtgagcgaccccaaaacc
aacgtccggaaatgtgctttagagaccataatgagcctgctgaagcacggcgtgatcacg
tgcagcctggacaacctggccattctctccgagcgctgtcgagacccagctgtgtccgtg
aagaagaaagccatgcagtgtctaatggatctcctcgacgcacttcccgacaatgcggac
gtccaggaggcgtggctgaggggcgtggtccctgccgtgatggactctgagagctctgta
caggagaaggctctggagtgcctcaacgacaaaatcgtcactcacattaaaagtcatgct
ggctatcgtcaagacaacgcctcacagagggtggcctgggacctgctgaggctgatgtgt
gataagtgtcaggatctcgggagatatttcagtaaggcgttcagcgtgtggtcgaggcag
gagaagttttcttccacgctggtgaacagtctgatctggcacacagagcgcgagcaggca
gcgcccgcctggcttctgctctccaaagtggccggctgctgcgccaagatcaacttgggc
accattctcgaggcctgggataacactttcaggtctccggttgtcgacgtggctatgacc
tgccacatcctgaccgtcctcggtcacgtcgcttcgagtctcaacgacgacaccaaaagc
aggatcatcgacgatctgatggcgtggctgaagggattcactctcccgctggaggtgatc
agcgccggcgtcgacgccctgttctgtctcggccaatccgacaacatcaaagacactatg
agcttcctgaaccagttctgcggagagctagtgtgtgtgtgcgaggcgtacctgtccaca
gtgctcttaaacgagagaggggcggagaatctaaacgaagatcttctggtgaagcacctg
tacactctgggcgtggcctctttacactgccctgccaaagtgcaaaagcgagtcttcctc
ctcgtccagtccatcctcacgacatccgagcaagctggtgcggagctgccaggtagtcag
cctctctctcagttcaagccctcttcgatgccgacagttgtacgcgctcatgcggtcatc
acgctagggaagctctgtctgcagcatgaggagctgatgttgcgctacgttcccgcgttt
gcacgcgagctggaggtgggcacggagttggcggtgcgtagcaacgtggtggtggtgctc
tgcgacctgtgcgtgcgctacccgaacacgctgagccgctacatcagcaacatctcggcc
tgtctgagagacgccgagccggttatcagagagcagagcctcatcatgctcaccaatctg
ctgcaggaggagttcgtcaaatggaaaggttccctgttcttccgattcgcggccgtcctg
gtggaccccgatccctccattgctgatctctgcgagtactgcctggtggacctgctgcta
aagaagaacccgctgatgttctcccagcacttcatcgagtgcatcttccacttcaacgcc
tatgagaagcacaagaagtacaacaggttcccacagacggagagtgagaagagcaggttt
tctcttaaaggcctggagaaccagggccaacgtttcaggatctacagattcctcctgaaa
cactttacagacgagcagcgctttaatatcaccaccagaatcagccaggatgttctggca
tgttttgtggactcggagctgcctttagatccggaaggcgctgagctcctggctgatgtc
ttcgacgtcctttcactgaaggagatcaagctgacggcgatgagcggaccttcacccggc
gacgaggctcccgaggacgagatggcggccgctaaagccgtgctgcagaaaaagctcatc
tctcaggtgcagaaaaagaactttgtggagaacgtgatccccatggtcatcgccttgaag
aacatgctggaggagaagcgcttgcccgtgctcaaacacctcatggcctacctgcaggtg
accatgcaggactaccgctccgaggtgaaggagctcttcgcagcagacgagcagctcgca
gcagaagtggagtacaacctgaagacgtttgagcaacaaaaggagcaggagcaggagctg
gagcagcggctcggcagtttcatgctgtcacccagagctaaaggtagcgcagctgcgtct
ccggctccaggtgtcagagctacaccccgcccacctcaggctgcccagagaccctcaaac
acaccaaagtctgcagatgccctcagacgacgtacctttgctggaatgttgacccccact
ggacagcgaccttcccgcggcgtaatgtcttcaggacccgctaaaggagtttttgacggc
agagctatcagcacgccgcaagagagtattaacgaactgacgttcggcgagcagtttagc
gccatctgctacgacggagctggcgctaaggatagtgaaaacattctacatctgatgtca
cctgaacaagaagctccagcaccaaggcagtggaacgtcgagtctccagtcgtgaggaaa
agccgaagcaagagacggccgttttga
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