Clarias gariepinus (North African catfish): 128508182
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Entry
128508182 CDS
T10780
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128508182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128508182
03036 Chromosome and associated proteins [BR:
cgar03036
]
128508182
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
128508182
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
128508182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
128508182
NCBI-ProteinID:
XP_053335375
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All DBs
Position
20:complement(16056482..16074664)
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AA seq
1207 aa
AA seq
DB search
MAEPVVAMCEQLVKAVTVMMDAESSQRYRLEALKFCEEFKEKCPYCIPCGLQLADKSQTA
VVRHFGLQILEHVIKFQWNNMPQQEKVHLKDCTMEMLTSGTYPILEEESHIKDALSRIVV
EMIKREWPQQWPDMLKEMETLTTFGETQTELVMLILLRLAEDVITFQTLPQQRRRDIQHT
LTLNMDSIFSFLLTILQQHVDEYRKLKIIPGQELKAKAHCRVAVTTLNTLAGYIDWVALV
HITNNNCRLLEILCLLLSELELQLEAAECLLIAISRKGKLEDRKPLMVLFDDVAIHYILS
AAQSVDVGLSETRYTFLKRLCQVLCALGSQLCALVGSPVEMEVPANLSKYLEAFLAFTTH
PSQFLRSCTQTTWGNMFRHELLSKEPVLIQMAVKYLNATMTNLVKSGFPSKNDSTASEYS
RVDFDSDEDFNAFFHSFRAQQGDVIRSSCKIAPLEAFQIAGEWLRYQLNSPLSAGSALSK
AGEGTYSAFSPAVAQWEAMTFFTESVMGQLFKVLEKEKLPVDQGMELLHAVVNYETRDPV
ILSCILTNLSTLFPFVLHRPEVLPQVFFKLFPAITFELVEESKAPRTRAVKNVRRHACSS
IIKMCRDYPEFILPCFDMLYTRVKELFTNELLLTQMEKCALMEALVLISNQFKDYNKQKA
FLDELMSPVTTRWLSEEMRSVLSDPASFIKFIGADQVNTEPGAEDQMGINRSRISFCVYT
ILGVVKRARWPADVDEAEAGGFVVGYSPAGAPIYRNPSTEPLLTLLPNLLTLIRTHNSLF
LPENLSRLSETFSRAYDVMDVEKNLILGISQPVLDVYDSPVYKSALERLQGFFCTLYDNC
YHVLGHAGPALLQDFYTIEGLAEQMVSSALIHLEHVPDHRLRPLLRVFMKPLVTSCPPEY
YESLLCPLLGLLFSHLLQRLNLRWQIINQRTSVCGPDDDEAYEENQVSQEMLEDRLVRLA
TREVMDLLSVSCISRKLPESAANREDADGDEEMMTTDSSQLNASHTSDELTELGKCLLKH
EDIYMNLLAISFNSLSWRDTTNCQRAATLICWTLLRQVVGANLLPDAVTWLYTRVLSGLQ
MHGQHEGCNAALTQLALLIYDALRPQYAELRSIMNQIPNIQPDLLEQFDQKTINPASQKV
GEKKRKDQFKKLIAGAVGKPLGQQFKKEVHIRNLPSLFKKVKPNKDIVVNSENAGLVALF
SPENDDH
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccggtggtcgcgatgtgcgagcagctcgtgaaggctgtgaccgtcatgatg
gacgcggagtccagtcagcggtatcgcctcgaggctctaaagttttgcgaggaatttaaa
gaaaaatgcccgtactgtataccatgtggccttcagttagcagacaaatcccagacagca
gtggtgagacattttggactccaaatactggaacatgttataaagtttcaatggaacaac
atgccacagcaagagaaagtccacttgaaagattgcaccatggagatgctgaccagtgga
acgtatcccatcttggaggaggagagccatattaaggatgctctttcgaggattgtggtg
gagatgattaagagagagtggcctcagcagtggccagacatgctgaaagagatggaaacg
ctcacaacgttcggggagacgcagacggagctggtgatgttgatcctgctgcggctggcc
gaggacgtgatcacgtttcagactctgccccagcagcgccggagagacatccagcacacg
ctaacactgaacatggacagcatcttcagcttcctcctgaccattctgcagcagcatgtc
gatgagtacaggaagctgaaaataatcccaggacaggagttaaaggccaaagctcattgt
cgggttgccgtgacgaccttaaacactctggccgggtacatagactgggttgcactggtc
cacatcacaaacaacaactgccgtttactagagattttgtgcttgctcctgagtgaatta
gagcttcagctggaggctgctgagtgcctgcttattgcaatcagcaggaagggaaaacta
gaggacagaaagcccctcatggtgctgtttgatgacgtggccatacactacattctatcg
gctgctcaatcagtggacgtggggctaagcgagacgagatacaccttcctaaagagatta
tgtcaggttctgtgtgctctaggcagtcagctctgtgctctagtgggctcaccagtggaa
atggaggttcctgctaacctgagtaaatacttggaagcattcctggccttcacgactcac
cctagtcagtttcttagatcttgcactcagaccacctggggtaacatgttcagacatgag
cttttatctaaggagcctgtgctcatccagatggctgttaaatatttaaacgcaaccatg
accaaccttgtaaagtcaggattcccatcgaagaacgacagcacggcttctgagtactcc
cgcgtggacttcgacagcgacgaggacttcaatgctttctttcattcttttcgggcccag
cagggtgacgtcatccgtagttcgtgtaagatcgcccctcttgaagccttccagattgct
ggggaatggttacgatatcagctcaactcacccctcagcgccggaagtgctctgtctaaa
gcaggagaagggacgtattcggcattttcgcccgcggtggcacagtgggaagccatgacc
tttttcacagagagtgtgatgggacagctttttaaagtcctggaaaaggagaagctgcct
gttgaccaaggcatggagctgctgcatgctgtcgtgaactacgagacaagggatcccgtc
atcctgtcctgcatcctcaccaacctgtccactctcttcccctttgtcttgcatcgccct
gaagttctacctcaagtcttctttaagctgtttcctgctatcacatttgaactggttgaa
gaaagcaaggctcctcgaacccgagcggtgaagaacgtcagaaggcacgcctgttcatcc
atcataaagatgtgtcgagattatccggagtttattctgccatgctttgacatgctctac
actagagtgaaggagctgttcaccaatgagctgctactgactcagatggagaagtgtgcc
ctcatggaggctctggtgctgatcagcaaccagtttaaagactataacaagcagaaggcc
ttcttagatgagctcatgtctcccgtaacgactcgctggctttcggaggagatgcgcagt
gtactatcagatccagcaagcttcatcaagtttatcggtgctgatcaggtcaacaccgaa
cccggcgctgaggatcagatgggaatcaacagatcaaggattagtttctgcgtgtacacc
atcctgggcgtggtaaagcgagcacgctggcctgcagacgtggacgaagccgaagccggg
ggtttcgtagtgggttactctcctgccggagccccgatctacagaaatccttccacagag
ccactgctgaccctccttccaaatctgctcaccctcatcaggacccataacagcttattt
ctaccggagaatctctctcggctcagtgagaccttcagccgggcgtatgatgtcatggac
gtggagaagaatctcattttaggaatctcccagccggtgctggacgtgtatgactcccca
gtgtacaaaagcgcactagagcggctacaaggcttcttctgcacactctatgacaactgc
taccacgtgctagggcatgctggcccggccttgcttcaggacttttatacgatagagggg
ttagctgagcagatggtcagctctgcactcatccacctcgaacacgttcctgaccatagg
cttcggcctttgcttcgggtcttcatgaaaccgctggtcacttcctgtcctccagaatac
tacgagagtcttctctgtccgctgctcggcctcctgttttcccacctgctgcagagacta
aatcttcggtggcagatcatcaaccagaggacgagcgtgtgtggtccagatgatgacgag
gcttatgaggagaatcaggtatctcaagagatgctggaagatcggttagtgcgcttggcc
acacgagaggtcatggatctcctctctgtgtcatgcatatcaagaaagctgcctgaatca
gcggcaaacagagaggatgcagatggggatgaggaaatgatgaccactgattcgtctcag
ctgaacgcctcacatacgtcagatgagctgacagaactgggaaagtgtctccttaaacat
gaggacatctacatgaatctactagccatctcgtttaactccctgtcatggagagacact
actaactgtcagcgggccgctactctgatctgctggaccttgctgagacaggtggtgggc
gcgaacttgctcccagatgccgtgacttggctgtacaccagagtgctaagcggcctgcag
atgcacggacagcatgaaggctgcaacgccgcgctaacgcagctcgccctgctaatctat
gatgccctgcggcctcaatacgcagagctgcgttccatcatgaaccagatccccaacatc
caacccgacctgctggaacagttcgaccagaaaaccatcaaccctgcatcgcagaaagtg
ggtgaaaagaagagaaaagaccagttcaaaaagctcatcgccggagccgtcgggaaacct
ctcgggcagcaatttaagaaggaggtccacatccggaaccttccctcgctctttaagaag
gtcaagcctaacaaagacattgtggtaaacagcgagaatgctggattggtcgctctcttt
tcacccgaaaatgatgatcattag
DBGET
integrated database retrieval system
