Clarias gariepinus (North African catfish): 128508208
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Entry
128508208 CDS
T10780
Name
(RefSeq) stimulated by retinoic acid gene 6 protein-like
KO
K23088
vitamin A receptor/transporter (stra6) family protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128508208
Transporters [BR:
cgar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
128508208
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GFIT
Motif
Pfam:
RBP_receptor
hNIFK_binding
PBECR2
Motif
Other DBs
NCBI-GeneID:
128508208
NCBI-ProteinID:
XP_053335406
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Position
20:complement(1636510..1668567)
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AA seq
611 aa
AA seq
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MDPLFSNTSFQEYLFDVVILLLLSFVERRKNHHPFEERFPCLRGKFGIVVPLDFTSCLEN
RWSYAFAFGATAPLIFGLFFGFINPFPYKLPRYLKVFVYLISSMEVGIVSKPFFACLSTP
HKMLGGVLGLLYTLAWFIVQLWEVVWCKKASTLNEEDLFVFSLQYEWLYDAPNLLSLGFL
FFRFGFMIVNDVLIRVKKHSNKKEEKKHQYRYVQRLLRRPAEVFMQKSWFQRKVYEWDPY
FKFPNRIIATVVLSFLGVYLIVLTEQILSSWCTKMIYGPYFYIFANEPTWTTYLNYAIYT
WYVTSVCAAISSVINISHVMVYYRKHIKSLWAGEKQYLPKTFTLRPAVSLAGLLKYPGYQ
IAFTMWGYLIVHLAMFTAGMVFVYLVISPIRENGFLSWLLDLITFLTNFFIVFTLMKLQR
IVIKWVFLQDKTSPHDEEKPLALNNRSTILHRKAFHTFNYYLFFFNVILGLGSCVLRLIR
SAIVALFLVSRIERTVMPQGFKKLDASHCTWVGMIITDHHHNNPVLVCFCHLLVKHSLLS
VQVDVKPVCSPAFLAKKRAHLRWVLVYTLLRNPKLILLRRKCWNANREELEHAFIWAMTT
HRGNKNTIKNL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcttttcagcaacacgtcgtttcaagaatatctgtttgatgttgttatattg
ctattgctgtcgttcgtcgagcgcagaaagaatcatcatccctttgaggagagatttcca
tgcctgagaggcaaatttggcattgtagtcccccttgacttcacgagctgtctggagaac
cgatggtcctacgcttttgcttttggtgccacagcacctctgatatttggtttgtttttt
ggcttcatcaatccttttccatacaaactaccgcgctacttaaaagtgtttgtgtacttg
atatcatctatggaagtgggcatagtgagcaagccgttcttcgcctgcctttcaacacca
cacaaaatgctcggtggtgttctgggcctgctgtatacactcgcctggtttattgtgcag
ctgtgggaagtagtctggtgtaagaaagcatctacactcaatgaggaggacttgtttgtt
ttttctctgcagtatgagtggttatatgatgcaccaaatttactgtctttggggttcctg
ttcttccggtttggcttcatgatagtgaatgatgtcctgatccgcgtgaagaaacacagc
aataagaaggaagaaaagaaacatcagtacagatatgtacaaagattactgaggcggcct
gctgaagtgtttatgcagaagagctggttccagaggaaagtgtatgagtgggacccatat
tttaaattcccaaataggatcatcgccactgttgtgctctccttccttggagtatacctg
attgtgttaactgagcagatcctatcttcatggtgtactaagatgatctacggtccctat
ttttatatctttgcaaatgagccaacttggacaacttacctaaactatgcaatatatacc
tggtacgtcacatcagtgtgtgctgccatctcatctgtcattaacataagtcatgtgatg
gtctattacagaaagcacattaaatcattgtgggctggagagaaacaatatctgccgaag
acattcacactgagacctgctgttagtctggcaggacttttgaaatatcctggctatcag
attgctttcacaatgtggggttatctgatcgttcacttggcgatgttcacagctggaatg
gtttttgtatatctggttatatcaccgattcgggaaaacggcttcctctcctggctgctc
gacctgataacctttctgacaaatttcttcattgtgttcactctgatgaagcttcagcgt
attgtaataaaatgggtttttctgcaagacaaaacctcacctcatgatgaagagaaacca
ctggcactcaataacaggtctaccatcctccacaggaaagcttttcacacctttaactac
tacctcttcttctttaatgtaatcctgggcttggggagctgtgtgctgaggttaatcagg
agcgccatcgtggccttgtttcttgtgtcacgtatcgagcggaccgtaatgcctcagggc
ttcaagaaattagatgcaagccactgtacatgggtgggaatgataataacggatcatcat
cacaataatccagttctggtgtgtttctgccacctgctggtcaaacacagcctgctgagt
gttcaagtagatgtaaaaccagtatgttcaccagcatttctggcaaagaaacgagctcac
cttcgctgggttcttgtgtacaccttgctgaggaaccctaaactcatcctgctgaggagg
aaatgctggaatgcaaacagggaggagttagagcacgccttcatctgggccatgacaaca
cacagagggaataaaaacaccatcaaaaacctgtga
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