Clarias gariepinus (North African catfish): 128508353
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Entry
128508353 CDS
T10780
Symbol
rapgef2a
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04517
IgSF CAM signaling
cgar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128508353 (rapgef2a)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128508353 (rapgef2a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128508353 (rapgef2a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ_6
PDZ
RA
cNMP_binding
RA_2
PDZ_2
PDZ_4
KLRAQ
Motif
Other DBs
NCBI-GeneID:
128508353
NCBI-ProteinID:
XP_053335619
LinkDB
All DBs
Position
20:complement(11633733..11665240)
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AA seq
1497 aa
AA seq
DB search
MASYVDSSFRQAIMKNPSERTQQDLQIVYSYLHGMEALSNLREHQLRLMCETVRYEHHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEASEMIVV
DYMEDSEEYFQRQASHRQSRRRFRKINQRGERQTIIDTVEHYPASKPPLPPGYHTQPESS
KSQLPADFAKLHLSDGLHLHMSSSQSRSSIASDSGSSSLSDIYQATESDCGDVDLSGLPE
TAVDSDDDDDDEEVGRSTDPLMSRDIVRDCLEKDPVDRTDDDIEQLLEFVQQLPAFSSLS
VSVRRALCSVMVFAVVERAGTIVLNHSEELDSWSVILNGAVEVMYPDGQCETVGMGGSFG
VSPSMDKELMVGVMRTKVDDCQFVCIAQQDYCSILNQVELNTQRVEEEGEIVMVKEHREL
DRTGTRKGHIVVKGTPERLIQHLVEDHSVVDPTYIEDFLLTYRTFLSSPLMVGQRLLDWF
NDPSLRDKVTRVVLLWVNNHFSDFEGDPDMTNFLEEFQTNLEREKMSGQLRLLNIACAAK
AKSRVVTITRSSRDLPLPFTLMGGAERGTHLFISSVDTGSKAEEAGLKRGDQILEVNGQT
FDNVHLSKAIEILQNNIQLSMSVKTNLLVFKELVARIAEERKNGVPHLPKIVDGKKSSRY
SVPDLGVDSGVIYQEKVSKKAKAHTMGGRNKLMKILDKTRISILPQKPYSDLGLGQSQDD
SIVGLRQTKQAPPTTTITGSLSSSNPDLAQGQQRIIDYSMQPPAPGFTQLQDQVLRVFKA
DQQSRYLLINRDTTAREAANLAVREFGLTAGPEAYSLCEVSVTPEGVTKQRRLPDQLNKL
ADRIQLCARYYLKSNMETETLCSDVEAQELQRESQVCLLSLSSTEIANQLSARNYVLFAS
IEPTDYITDLFKLHPHQPPGNLRNFEDLVNQETFWVATEIVREPNQAKRMKIIKHFIKVA
LHCRDCKNFNSMFAIISGLNLAPVSRLRATWERLPAKYEKLLTELQEVFDPSRNMAKYRN
LLNKHNLQPPIIPLFPVIKKDLTFLHEGNESKVDGLVNFEKLRMIAREIRHVVRLASVTM
DPGLLFRTRKKKWRSLGSLSQVSSSSLTEGTVGPRRRGRRSSFLSAKKLYETELMSRRVR
QYLDMLSHESDEDALHALSLQWEPANHTVHKSAVEKRRVDASPSTPRSPTPKNLPRKKTT
GKESAPFGAHSPGSHHAEEGPKRPQEDTQSNASSIRSSPPTFPANLSRKGPDQLSLLSSS
SSDLVMTDDHIIHAHTHAPSHTRTFTQTPNTHRPELDQISLGSYSLTQDQCDRASLDAAD
SGRGSWTSCSSGSHDNIQNIPQRMGCYDSRSWETLSEGPGMGRSQSATPLGYWVDESEGD
TGTIKRRGGKDEMPNVQKSTMNRGGGRFREPPPTPPGYTALSLAEVDELGHNPVHGHTHG
RRPPDYNAALQRSRLIKRSLDLEPPPQPRPPTRMHGYTHCPTPRRPPCDENEQISAV
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggatagcagttttcgtcaggcgattatgaagaacccgagcgagagg
acgcaacaggaccttcagatcgtctactcctacctgcatgggatggaagcgctgtccaac
ctgagagaacaccagctcaggttgatgtgtgaaacagttcgctacgagcaccatgaagcc
aatgaggttttatactaccctgatgacatcgggacctgctggtacatcttgctctctggg
tcggttttcattaaggaatcgatgttccttccgcgaagcagttttgggaaacgctctgca
gggagtttgcggcgaggctgcgagtgtatcgtcctcgaggcctccgaaatgatagtggtg
gactatatggaggacagcgaggagtattttcagaggcaggcgtcacatcggcagtcaagg
agaaggtttcggaaaataaatcaacgcggagagaggcagaccatcatcgacacggtcgag
cattacccagctagcaagccgcctcttcctccaggctatcacacgcagccggaatcttcc
aaatcccagcttcctgcggatttcgctaagctccacctctctgacggactccacctccac
atgtcctccagtcagtctcgctccagcatcgcaagtgactcaggaagcagcagcctttca
gatatttaccaggctactgagagcgattgcggcgatgtggatctcagcggactccccgag
acggcagtggattcggacgacgacgatgacgatgaggaagtggggagatcgacggacccc
ctcatgagtcgagacatcgtaagagactgcctggaaaaagaccccgtggaccgcacagac
gatgacatcgagcagttactggagtttgtgcagcagctcccggcattctccagcctcagc
gtgtctgtaagacgagcgctctgttccgtcatggtgtttgccgttgtggagcgcgcagga
actatcgtgctgaaccacagtgaggagttggactcctggtcagtaatcctgaacggagct
gttgaggtgatgtatcctgacggccagtgtgagaccgtagggatgggcggaagtttcgga
gtctctccatccatggataaagagctgatggtcggcgtcatgaggaccaaagtagacgac
tgtcagtttgtgtgtatagcgcagcaagactactgctccatcctcaatcaggtggaactg
aacacgcagcgggtggaggaggagggagaaatcgtaatggtgaaagaacaccgagagctc
gaccgcacgggaacgcgcaagggacacattgttgttaagggcaccccggagcgtctgatc
cagcacctagtggaggaccactcggtagtagacccaacatacatcgaagactttctgttg
acctatcgcaccttcctgtccagtcctctcatggtgggccaaagacttttggactggttc
aatgaccccagtttacgtgacaaggtgacacgtgtggtgctactttgggttaacaatcac
ttcagcgactttgagggagacccggatatgacgaacttcctggaggagttccagaccaat
ctggaaagagaaaaaatgagtggtcagttacgattgcttaacatcgcatgcgccgccaag
gccaagtcccgtgtagttaccatcacaaggtcttcccgcgatctacccctccccttcacg
ctgatgggcggcgccgagcgagggacgcacctctttataagctctgtggacacaggcagc
aaggcggaggaggcggggcttaagcgcggagaccagatattggaggtgaacgggcagact
ttcgataacgtacacctgtccaaagctatagagatcctccagaataacattcagctgtcc
atgagtgtcaaaaccaaccttctggtctttaaggagctggtggcccgaatagcagaggaa
cggaaaaacggcgttcctcacctgcctaagatcgtcgacgggaagaaaagctcccgctac
tccgtacctgatctcggcgttgattccggggtcatttatcaggagaaggtcagcaaaaag
gctaaagcacacaccatgggcggccgtaacaaactgatgaagattctggacaagacgcgc
atcagcatcctacctcaaaaaccatacagtgacctcgggttggggcagtcacaggacgac
agcattgtgggcctgaggcagaccaagcaggccccgcctaccaccacgatcaccggaagc
ttgtcgtctagcaacccggacttggcgcagggccagcagcgcatcatcgactacagcatg
cagccacctgcacctggattcactcaattacaagatcaggttctacgggtgttcaaggcg
gatcaacaaagtcgctacctgctgatcaatagggacaccacagccagagaagcggccaat
ctggcagtccgcgagttcggcctgaccgccggccccgaggcttattcgctgtgtgaggtg
tccgttacgccagagggcgtcaccaaacagaggagacttcctgatcagctcaataaactg
gctgacaggattcagctctgtgcgaggtactaccttaagagtaacatggagacggagacg
ctatgctcggacgtcgaggcccaagaactgcaaagagaatctcaggtctgtctgttatct
ctgagctccacagagatagccaatcagctctcggcacgcaactacgtgctcttcgccagc
atcgagcccaccgattacatcacggacctcttcaagctgcatccccaccagccgccgggc
aaccttcgcaacttcgaagacctggtcaatcaggagacgttctgggtcgccacagagatc
gtgcgggaacccaaccaggccaagaggatgaagataatcaaacacttcatcaaagttgcc
ctccactgtcgggactgcaaaaacttcaactccatgttcgcaatcatcagtggcttgaat
ctcgcccccgtgtcgcgtctccgcgccacatgggagcgtctaccagccaaatacgagaag
ttgttgacggagctgcaggaagtcttcgacccgtcacgcaacatggccaaataccgcaat
ttgctgaacaagcacaatctccaaccgccaatcattcctctttttccagtcataaagaaa
gacctcaccttcctccacgagggaaacgagtctaaagtggacggactggttaatttcgag
aaactcagaatgatcgcgcgagagatcaggcacgtggttaggctggcgtccgtcaccatg
gatccagggctgctcttcaggacgaggaagaaaaaatggaggagtcttgggtctctgagt
caggttagcagctcatcactgactgaggggacagtaggtcccaggagacgagggagacgg
agctccttcctgagcgccaagaaactctacgagacggagctgatgagcagacgagtgcgg
cagtacctcgacatgctctcgcacgagagcgacgaagacgccttgcacgccctgtctctg
cagtgggagccggccaaccacacagtgcacaagagtgctgtggagaaaaggcgagttgac
gcgtctccgtcaacgccaagaagccccactccaaagaatctccctcgaaagaagacaact
ggcaaggaatccgcaccttttggtgcgcattctcctgggtcacaccatgcagaagaggga
ccaaaaagaccgcaagaagacacccaatcaaatgcttcttccatccgttcgtccccgccc
actttcccagccaacttgtccagaaagggacctgatcagctgagtcttctgagttcctca
tcatctgacctggtcatgacggatgatcacatcatccacgcccacacgcacgctccctct
cacacgcgcacgttcacacagactccgaacacgcaccggcccgagctggaccagatcagt
ctcggatcttattcactgacccaggaccagtgtgaccgcgcctcgttggacgccgccgac
agcgggcggggcagctggacctcctgctccagcggctcccacgacaacatccagaacatc
cctcagcgtatgggctgctacgacagccgcagctgggagacgctatcggaggggccgggt
atggggcggagccagtcagccacacccctcggctactgggtggacgaatcagaaggtgac
accggcacgatcaagcggcgcgggggaaaagacgagatgccgaatgtgcaaaaaagcacc
atgaaccgagggggagggcgtttccgagagcctccgcccactccgcccggatacaccgct
ctgtcgttagccgaagtcgacgaactcggccataatccggtccacggtcacactcatggg
cgacgcccacccgactacaatgcagccctgcagaggtcgcgcctcattaagaggtcgttg
gatttagaacctcccccgcagccacgcccacccactcgcatgcacggatacacccactgt
cctacgccgcgccgaccgccatgtgacgaaaatgaacaaatatctgcggtctaa
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