Clarias gariepinus (North African catfish): 128508369
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Entry
128508369 CDS
T10780
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04517
IgSF CAM signaling
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128508369
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128508369
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128508369
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128508369
Intermediate filaments
Intermediate filament-binding proteins
128508369
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
UBA_9
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
128508369
NCBI-ProteinID:
XP_053335630
LinkDB
All DBs
Position
20
Genome browser
AA seq
2352 aa
AA seq
DB search
MELQRATSMPGPLSPGPLSPGRVSPGHLSPEHLSPGPGPSYQSSSPGPSYGAAAFNYNQM
EGRFKQLQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGEKLP
KPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQD
ISVETEDSKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLID
FDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMK
ALKVEGKRIGKVLDYAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQL
QAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYIPREGKLISDINKGWERLEK
AEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAAT
KKHEAIETDISAYEERVQVVVAVASELEAENYHDIKRITVRKDNVLRLWDYLLELLKARR
QRLELNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQA
DRVKAVNTNAQKFADDSEGYKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLW
KFFWEMAEEEGWIREKEQILSSDDCGKDLTGALRLLSKHKALEDEKSGRAGHLQQTVHQG
KELVAAGHFGANKISKRITEVQEQWVALEQLFAARKVRLQEACALHQFQADADDMDAWML
DALRIVSSADVGHDEFSAQALVKKHKDVAEEIDSYRPVLDALHEQAKALPEEQARSSDAN
GRLAGIEERYKEVVELTRLRKQALQDALALYKMLSEADACELWIDEKEQWLNGMEIPEKL
EDLEVIQHRFESLEPEINSQASRVAVVNQIARQLIHSGHPSEKEIKTQQDKLNTRWSQYR
ELVDRKKDALNSALGVQNYYLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGM
ERDLVAIEDKLGDLGKEADQLAEEHPDQAPGIKGHLGEIKDVWEEMKGTMRAREESLGEA
SKLQQFLRELDDFQVWLSRTQTAVASEDMPNTLAEAEKLLAQHEGIKNEIRNYKEDYQKM
RDMGETVTRGQTDAQYMFLSQRLQALDTGWNELQKMWENRQKLLSQSHAYQLFLRDTKQA
EAFLNNQEYVLAHTEMPATLEGAEGAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNI
SAERIQEKVVSIEERHKKNRAAASELLTKLKDNRDLQRFLQDCQELSLWISEKMLTAQDM
SYDEARNLHSKWLKHQAFMAELQSNKEWLEKIQKAGTALVAEKPETEAVVKEKLESLKKM
WDELESTTQTKAQCLFDANKAELFTQSCADLDKWLSGLEGQIQSDDFGKDLTSVNILLKK
QQMLESQVEVRQKEVEELRAQAQALSQEGKGSEEVDGLRCGVEKKFHQLQDPLKKRRSNL
MASREIHQFNRDVEDEILWVEERMPMATSTEHGNNLQTVQLLIKKNQTLQKEIQGHQPRY
DDIFERSTHILKDDSPVSATIHQRLDDLKRLWSLIQEEVEKRHRRLEEAHKAQQYYFDAA
EAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRALVAAG
HPESERISMRQSQVDKLYAGLKDLSEERRGKLDERSCLFQLNREVDDLEQWIAEREVVAG
SHELGQDYEHVTMLQERFREFARDTGNIGQERADTVNKMADELINSGHADAATIAEWKDG
LNEAWADLLELIDTRTQILAASFELHKFYHDAKEVLGRILDKHKKLPEELGRDQNTVEAL
QRMHTTFEHDIQALGTQVKQLQEDAARLQSAYAGDKAEDIQRREAEVLEAWRALLEASEG
RRVRLIDTNDKFRFFSMVRDLMLWMEDVIRLIDAQEKPRDVSSVELLMNNHQGIKAEIDA
RNDSFTTCVELGKTLLSRKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQF
SRDAGVAEAWLLGQEPYLSSREVGQSVDEVEKLIKRHEAFEKSAATWEERFAALERLTTM
ELLEVRRQQEEEEKKRQAQPVEVSPTEVASPQQREGEQVSQNGAPPEQDSPREDTGGSDV
VNGMAESSPGSSPTGSRKAKVGQAATLPTKSQDTAAAQIEGFLNRKHEWEGHNKKASNRS
WHNVYCVINNQEMGFYKDSKSASQGIPYHGEVPISLKESTCEVALDYKKKKHVFKLKISN
GNEYLFQAKDDEEMNSWIQAISCKTPSEISSHSTPASGRTQTLPTSVSSGAESSPGKREK
DQAKRFSLFKKK
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagagggctacaagtatgcctggacccctgtcccctggacctttatcacct
ggacgagtttctcctggtcatctctcccctgagcacctatctccaggtcctggaccatcg
taccaaagctctagtcccggtcccagttacggcgcagccgcttttaactataaccagatg
gagggtcgatttaagcagctgcaagatgagcgtgaagcagtacagaagaagacctttacc
aaatgggtgaactcccacctggctcgagtctcatgccgcatcacagacctctacatggat
ctaagggacggccggatgctcattaagctcctggaagtactgtctggagaaaaactgcca
aagcccacgaaaggccgtatgagaattcactgtctggagaatgtggacaaagctctgcag
ttccttaaagaacagcgcgtgcacctcgagaacatgggctcccatgacattgttgatggc
aaccaccgtctcactctgggtctcatctggaccatcattctgcgcttccagattcaggac
attagcgttgagacggaagacagcaaggagaagaagtctgccaaggatgccctgcttctc
tggtgtcagatgaagactgcaggctatccaaatgtcaacattcacaatttcactacgagc
tggagagacggcatggccttcaacgcccttattcacaaacaccggcctgacctgatcgac
tttgacaagctgaagaaatccaatgcccactataatttgcagaatgcctttaacctggct
gaacagcacttgggcctcacaaagctgctggaccccgaagatatcagcgtcgaccatccc
gatgaaaagtcaatcatcacctatgttgttacttactatcactacttctccaagatgaag
gcactgaaagtggaaggcaaacgtattggaaaggtgctagattatgctatcgagacagag
aagatgattgagaagtacgaatctctggcctcagacctgctggagtggattgaacagacc
atcattatcctcaataatcgcaagtttgccaactctctggttggagttcagcagcagctt
caggcctttaacacctaccgaacagtggagaaacctcccaagtttacagaaaaaggcaac
ctggaggtcctgttgttcaccattcagagcaaaatgcgagccaacaatcagaaagtctac
atacctcgagagggaaaactcatatcagacatcaataagggatgggagaggttggagaag
gcagagcatgagagggagcttgcgctgaggacggagctgattcgccaggagaagctggag
cagctggctcgccgattcgaccgcaaggcagccatgagggagacctggctaagcgagaac
cagagacttgtttcacaggacaactttggttttgatctgcaagccgtggaggcagccacc
aagaagcacgaagccatcgagacggacatctcagcgtatgaggagcgcgttcaagtggta
gtggctgtagcctcagagctggaggcagagaactatcatgacatcaagcgcatcacggtg
cgcaaagacaacgttctgcgtctgtgggactacctcctggagctcctgaaggctcgacgc
caaagactggagctcaacctgggcctgcagagagtcttccaggagatgctctacatcatg
gactggatggatgagatgaagatgctgcttttgtctcaggattatggaaaacatctgctt
ggtgtagaggacctgctgcagaaacacgctctggtggaggcagacatcgccatacaggct
gaccgtgtcaaagccgtcaacaccaacgcgcagaaattcgcagatgactctgaaggctat
aagccctgtgacccgcaggtgatccgtgaccgtgtggcccacatggagttctgttaccag
gagctgacgcagctggcagcggagcggcgtgcacgcttggaagagtcgcgtcgcctctgg
aagttcttctgggagatggctgaggaggaaggctggatccgtgagaaggagcagattctg
tcatcagatgactgtggcaaggacttgacgggggcgctgcggctgctcagcaaacataag
gctttagaagatgagaagagtgggcgtgccggacacctccagcaaacggtgcaccagggc
aaggagctggtagctgctggccatttcggcgccaacaagatcagtaagcgtattaccgaa
gtccaggaacagtgggtggctctagagcagctctttgcagcacgcaaggtccgtctacag
gaggcctgtgcgctgcaccagttccaagccgacgctgatgatatggatgcctggatgctg
gatgccttgcgcattgtctctagcgccgatgtgggccatgacgagttctcagcgcaggca
ttggttaagaagcacaaggatgtggctgaagagatcgacagctacagacccgtgctggat
gcccttcatgagcaggccaaagcgctacctgaagagcaggcacgctcatcagatgcaaat
ggccgtctagctggtatcgaagaacggtataaggaggtggttgaactgacaaggctgaga
aaacaagcactgcaggatgcactggctttgtacaagatgctgagtgaggctgatgcctgc
gagctgtggatagacgaaaaggagcaatggcttaacggaatggagatcccagagaaactg
gaggacttggaggtgattcagcacagatttgagagtctggagccagagataaacagccag
gcttctcgggtagctgtggtgaaccaaattgcccgccagctaatccatagcgggcaccct
agtgagaaagagatcaaaactcagcaggacaagctcaacaccagatggagccagtatcgt
gaactggtagaccgaaagaaggatgctctaaactcagctctgggagtgcagaattactac
cttgaatgcaatgagacaaaatcctggattcgtgaaaagaccaaggtgatcgagtccacc
caggatctgggcaatgatctggctggtgtcatggcacttcagcgcaagctgactggcatg
gagcgagacctagttgctatagaggacaaactgggtgacctgggaaaggaggctgaccag
ctggccgaagagcatccagaccaggctcctggcatcaagggccatttgggtgagatcaag
gacgtgtgggaggagatgaagggaaccatgcgtgcccgtgaagagtccctgggtgaagcc
agcaagctccagcaattccttagggagttggatgatttccaggtgtggctgtcgcgcacc
cagactgccgtagcttcagaggacatgcccaacactctggctgaggccgagaaacttttg
gcgcagcatgagggaatcaagaacgagattcgtaactacaaagaggattaccagaagatg
cgcgacatgggtgaaacggttacccggggccagacagatgcccagtacatgttcctgagt
cagaggttacaagcgctggacactggctggaatgaactccagaagatgtgggagaacaga
cagaagctcctgtcgcagtcgcacgcctaccagctcttcctccgtgataccaagcaggct
gaggctttcttgaacaatcaggaatatgtattggcccacacggagatgccagctaccctt
gaaggagcagaaggggccatcaagaagcaggaggacttcatgaccaccatggacgccaat
gaggaaaagatcaacgctgtggtagagacgggtcgcaggctggtcagtgatgggaacatt
agtgctgaacgtatccaagagaaagtggtctctattgaagaaaggcataaaaagaatcgt
gcagcagctagtgaacttctcacaaagctaaaagataatcgagatctccagaggttcctt
caggactgccaggagttgtccttgtggatcagtgagaagatgttaacagcacaggacatg
tcctatgatgaagcacgcaacctgcacagcaaatggctcaagcaccaggccttcatggca
gaactgcagtccaacaaagagtggctggagaaaattcagaaggctggaacagccctggtg
gctgagaagccggagactgaggcggtggtaaaggagaaactggagtctctgaagaagatg
tgggatgagctggagtcgactacccagaccaaggcccagtgcctgtttgatgccaacaaa
gctgagctgttcacgcagagctgcgcagacctggataagtggctctctggtctggaggga
cagatacagtcagatgacttcggcaaagatctgaccagcgtcaacatcttgttgaagaaa
cagcagatgctagagagccaggtggaagtgaggcagaaggaggtggaggagctgcgagcg
caggcccaagctctcagccaagagggcaaagggtcggaggaggtggacggcctgcgctgc
ggcgtggagaagaagttccaccagctgcaggatcctctgaagaagcgccggagcaatctg
atggcctctcgtgagatccaccagttcaaccgtgatgtggaggacgagattctctgggtt
gaggagcgaatgcccatggctacatctacagaacatggcaataatttacaaactgttcag
ctgctcattaagaaaaaccagacccttcaaaaggaaattcagggtcaccagccacgttac
gatgacattttcgagaggagcacgcacatcttgaaggacgacagtccggtcagtgcgacg
attcaccagcggttagacgatctcaagaggctctggagcttgatccaggaggaagtggaa
aaacgccacagacgcctagaggaagcacacaaagcccagcaatactacttcgatgcagca
gaggctgaggcctggatgagtgagcaggagctgtacatgatgtcagaagaaaaggccaag
gatgagcagagctctgtggctatgctgaagaaacaccagatcctggagcaggcagtggag
gactacgccgagaccgtgcaccaactttctaaaaccagccgagccttagtggctgctgga
catccagaaagtgagagaatcagcatgcgacagtcgcaagtggacaagctgtatgccggt
ctgaaagacctgtctgaagaaagacgtgggaagctggacgagagatcctgcctgttccag
ctgaaccgtgaggttgatgatttggagcagtggatcgcagagagagaagtggtggcgggt
tctcatgagctcggccaggactacgagcatgtcactatgctacaggagcgtttccgagag
tttgcccgcgacacaggaaacatcggccaagagcgcgccgacacggtcaacaaaatggca
gacgaactgatcaactcgggtcacgcggacgccgccaccattgccgagtggaaggacggg
ctcaacgaggcttgggccgacctgctggagttaatcgacactcgcacgcagatcctagct
gcctcctttgagctccacaagttctaccatgacgccaaggaggtgctcggacgcatcttg
gacaaacacaagaagctcccagaagagttgggtagagaccagaacaccgtagaggcactg
cagagaatgcacaccacttttgagcatgacatacaggctttgggaacacaggttaagcag
cttcaggaggatgcggcacgtttgcagtcggcctatgctggagataaggctgaagatatc
cagaggcgtgaggcggaggtgctggaggcctggcgtgctctgctggaagcttccgaggga
cgccgcgtgcgtctaatagacaccaatgacaagttccgattctttagcatggtgcgtgac
cttatgctttggatggaggatgtcatccggcttatcgatgcacaggagaaaccaagggac
gtttcatccgtggagcttttgatgaacaatcaccaaggcatcaaggctgagattgatgct
cgcaatgacagcttcacgacttgtgtcgagttgggaaaaactctactttcacgaaaacac
tatgcttctgaagagatcaaagaaaagttgcttcagctgacagacaagagaaaagaaatg
attgacaagtgggaggacagatgggaatggctgcgattggttctggaggtgcaccagttc
tctcgggatgcgggtgtggctgaggcatggctgctgggccaggagccatacctatccagt
cgagaggtgggtcagagtgttgacgaggtggagaagctcatcaagaggcatgaggctttc
gagaagtcagccgccacttgggaggagcgctttgccgctctggagagacttaccacgatg
gaattactggaagtgagaagacagcaagaggaagaggaaaagaagagacaggcccaacct
gtagaagtttcgcctactgaggtggcatcgccacagcagagagagggtgagcaggtatct
cagaacggagcacctccagagcaggactctcctcgggaggacacaggaggaagtgatgta
gttaatggaatggcagagagcagtccaggctcctccccaacaggaagccgtaaggcaaaa
gtgggccaggctgctacactaccaaccaagtcccaggacacggctgcggcgcagatcgag
ggctttctgaaccgcaagcatgagtgggaaggccataacaagaaagcatccaatagatct
tggcacaatgtctactgtgtgataaataaccaagagatgggcttttacaaagacagcaaa
agtgctagtcaaggaatcccataccatggcgaagttcccattagtctgaaggaatctacc
tgtgaggtcgcccttgactacaagaaaaagaaacatgttttcaaacttaaaatttcgaat
ggtaatgagtatctcttccaagccaaagatgatgaggagatgaactcatggatccaggcg
atctcctgcaagacaccctccgagatcagcagccatagcactcctgcctctggacgcacc
caaaccctacccacctctgtaagctcgggtgccgagtccagcccaggcaagcgggagaaa
gaccaagcgaagcgcttcagcctctttaagaagaaatag
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integrated database retrieval system
