Clarias gariepinus (North African catfish): 128508408
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Entry
128508408 CDS
T10780
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar02010
ABC transporters
cgar04148
Efferocytosis
Brite
Transporters [BR:
cgar02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128508408
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GFIT
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NCBI-GeneID:
128508408
NCBI-ProteinID:
XP_053335716
LinkDB
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Position
20:complement(18264172..18435872)
Genome browser
AA seq
2229 aa
AA seq
DB search
MGLLVQLRLLLWKNFTLRKRQKLRLIIELIWPLFLFFILVWVRSTTLPVYKGQCHYPNKP
MPSAGLLPWLQGMFCNIQNPCIAEPTPGESPGQVNNFNDSIISKALTEVQSVLADSSLLS
NIKLLSDDINKWTPILENFNTAKGRSIPIRSVLRDNETLSEYLKSNLSVSSASAQRLLSV
GLQLNQLPALSRQTDLRSTLCNSSVDRFLEFNSTSQKQEFQNFTCSLTPNQLLQTRAVLL
QNLDNRKLLAAVPSALNLNPADFVTLLARTSSHVAPLANQVSKIPTSTILNAMNSLDFRS
NPFGSLTMFMCGGNSSSNSSSAKPAFRLPPQATLSLSLNSSQGNSSEFCENLIGTLKGTS
ALRLFWASLRPLLLGRIVYTPDTPFTRKVMAQANNTFDALAKIGELAENWLENEDEIWTF
FHNSTQINTLRALLQNPIFSAALDQSLNGSRLSSKIIANFLFNGEEKDRPAGMPAFDWRN
VFNTTSQVARLIKQVMGCFDLDKFEAMDSERLLVERSLKLLDQEKFWAGVVFTDVDAGSP
SLVRYKIRMDVEDTERTDKIKDRSWAPSARDNPFNDLRYVRGGFVYLQDMLDRAIIQTQT
GVAQTLGVYLQQMPYPCYVDDAFVSSISTTLPMFLVLAYMYTVCEIIKGLVLEKELRLKE
VLRVVGVNNGALWFAWFTENMVLLTVPCALISILLKFGKVLTYSDPSVIFVFLLVFCIAT
VMQCFFISVFFSRANLAAACGGLIYFLLYLPHVLCYAWRDVMTFKIKLATSLLSCVAFGY
GCENFARYEEQGIGIQWKNIMLSSQDDDSYTFFISIIMMLVDALLYWLLTWYIENVFPGQ
YGVPKPWYFPFTSSYWCGTPAGADMDPLDALEEQNGYLEKPPASLKAGVSIRNLVKVYKT
GKKLAVDKLSLDFYQDQITSFLGHNGAGKTTTMSILTGLFSPTSGTAYVNGFDIRKDMDS
IRKTLGMCPQHNVLFNELTVEEHIYFYGRLKGRSSEEVKQEIDQMIKDVGLPHKRKDLAK
NLSGGMQRKLSVAIAFVGGSDVVILDEPTAGVDPYARRGIWELLLKYKKGRTIILSTHHM
DEADILGDRIAIISHGKVCCCGSSLFLKKTYGRGYYLTLARANQDMMTTQRHIGGKQLSD
ASSLDEGLGSGSISTMEPADLDDVTAVIRLHVPQAEFLEVIGQEMVYVLPYTGSKDGSFA
SLFKELDLEKVRLGISSYGISDTSLEEIFLKVAEETGVDVETNENAPPLQRDQRRSSKVS
RSRSMSSAMEHKATAASQQREKKGRFSNRVEDGQQSAGVNGRGSYVITGWPLIRHQFLAL
FIKRFHHARRSRKGIIAQVVLPALFVCLSLIFSLIIPPFVEYPNLELQPWMYGKPQNTFY
SADRTDMDEAMKVTRALLSEPGFGTRCMDGNPIPKYPCTPSGATDWFTPSVDPAILEIFK
NGNWSMKNPSPDCHCSTPGRNMMLPDCLPGAGGLPPPQRTQNTTDTLQDLTGRNMTDFLL
KNYAKSGKIRYGGISVGAINSQVKLNESEISALISDLKAFFNSSQNNMTEKFFQDLEILL
LDLGTKDNVKVWFYNQGWHAVVSFLNVANNAILRGYLPPGVQPKLYGISAFNHPLNLTKQ
QLTATLMSSSTDVVVAICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPTAYWVAN
FTWDMCNYIVPCIIVIIIFLSFQQKAYVSPQNLPALVLLLVLYGWAITPMMYPASFVFSV
PSTAYVVLTSINLFIGINGSIATFILELLDDPNITNVNTILKQVLLIFPHFCLGRGLIDM
AKNQAMATLFISLGEDRFENPLSWQMVGKNLLAMSIQGVVMFAFTLVIQYKFFCKPRLVT
RLPRTAGEEDEDVARERDRVQRGRAQNDLVRICDLTKVYSGKKVPAVDRITVGVPAAECF
GLLGINGAGKTTTFKMLTGDIRPSSGEAFLSGYSIRSEMSQVHQHMGYCPQFDAIDDLLT
GREHLEFYARLRGVPEREVTKVAEWGIQKLGLVKYSNKSAGTYSGGNKRKLSTAMALIGC
PPVVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAIMVNGQF
KCLGSIQHLKSRFGDGYTVIVRVRGDLSTVEEFVTQTFPGSVLKEKHHNTLQYQMPHQEG
ALSHIFSQFCKNQNDLGVEDYSVSQTTLDQVFVNFARQQHDAEDGVYENTVDLNDEIPMQ
SQNHTVHSK
NT seq
6690 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctggtgcagctccggcttctgctctggaagaacttcactttgcgcaagaga
cagaagttgcgattgataatcgagctaatatggcctctgttcctgtttttcatcctggtg
tgggtgagatccaccactctgcctgtctacaaaggccagtgccattaccccaacaagccg
atgccctctgctgggttgttaccatggttacagggcatgttctgcaacatccagaatcct
tgcatcgctgagccaacacctggagagagccccggtcaggtcaacaacttcaacgactcc
atcatctccaaggcgttaacagaagttcagtcggtcttagccgactcctctctgctgtct
aacatcaaacttctctctgacgatatcaacaaatggactcctattcttgagaattttaat
acagccaaaggtcgctcaatacctatacgcagtgttttgagagataacgagacgctctcc
gagtacctgaagagcaacctgtcagtatcaagtgcatccgcccagaggcttctgagtgtg
ggactccaactcaatcagttacctgctctctcacgccagacggacttgcgctccacactg
tgtaactcttctgtcgaccgtttcctggagtttaactcgacgagtcagaagcaggagttc
cagaacttcacgtgctccctgacgcccaatcagctccttcagaccagagcggttctcctc
caaaatctggacaacaggaagctcctggctgctgtgccttcagcactgaatttgaaccct
gcagattttgtcactctgttggccaggaccagttcccatgtagcccctctagcaaatcag
gtgtctaaaattcctacgtcaaccatcctcaatgccatgaactccctagacttccgctca
aatccctttggcagtttgactatgttcatgtgtggtgggaattcaagctcaaatagcagc
agtgcaaagccagccttccgactgccaccgcaagccacgctgtcgctaagcttaaactcg
tcccaaggcaactcaagtgaattttgtgagaatttgattggcactttgaaaggcacatca
gccctgcgtctattctgggccagtctccgcccacttcttctgggacgaatcgtctacacc
ccggacacgccctttacacggaaggttatggcacaggccaacaacaccttcgacgctctg
gctaaaatcggtgaactggctgagaactggctggaaaatgaagacgagatctggaccttt
ttccacaacagcacacaaatcaacacgctccgggctctgctgcaaaacccaatcttctca
gcagcgcttgatcagagcctaaatggaagcaggttgtcttcaaaaataatcgctaatttt
ctgtttaacggcgaagaaaaggatcggcctgcagggatgccagctttcgactggagaaac
gtcttcaacaccaccagtcaggttgcgagactcataaagcaggtcatggggtgcttcgat
ctggacaagttcgaggccatggacagcgagagactgttggtggaacgctctctcaagctg
ctggaccaggagaagttttgggctggagttgtttttacagatgttgatgcgggcagcccg
tcactcgtcagatacaagatccgcatggacgtcgaggacaccgagaggacggataagatt
aaggacaggtcctgggctccatcagctcgtgataacccctttaacgacctgcgctatgtg
agaggaggctttgtgtatctgcaggacatgctggaccgtgctatcatccagacgcagact
ggtgtcgcgcaaactctgggcgtctacttgcagcagatgccctatccgtgctacgtagat
gacgcctttgtttcgtccatctccaccacactgccaatgttcctggtcctggcctacatg
tacacagtgtgcgagatcatcaagggtctggttctggaaaaggagctccggctgaaggag
gttctccgagtggtgggcgtgaataatggagcgctatggttcgcctggttcactgagaac
atggttctgctaacggtgccgtgtgcactgattagcatattgctaaagttcgggaaggtt
ttgacatatagcgacccctctgtgatcttcgtgttcctgctggtgttttgcatagccaca
gtcatgcagtgcttcttcatcagtgtctttttctcacgagcaaatctggctgctgcctgc
ggtggacttatctacttcctcctctacctgccccatgtgctctgttacgcctggagagac
gtcatgaccttcaaaatcaagctcgccacgagcctgttgtcatgtgtggcgttcgggtat
ggctgtgagaattttgcacggtatgaggaacaaggcattggcattcagtggaagaacatc
atgctcagctctcaggatgacgactcttacaccttcttcatctctatcatcatgatgctg
gttgacgctttgctctactggttactcacatggtacattgaaaacgtcttcccagggcag
tatggagttcccaagccttggtatttcccttttacctcctcatactggtgtgggactcca
gcaggggcggacatggatcctcttgatgcattagaggagcaaaatggatacctggaaaaa
cctccagctagtctaaaagcaggtgtgtctataaggaacctggtgaaggtgtataaaaca
ggaaagaaactggctgtggataaactcagtctggacttctaccaggaccagatcacgtca
ttcttgggacacaatggtgcaggaaaaaccactactatgtcgatcctgaccggcctgttc
tccccgacgtctggcacagcttacgttaacggcttcgacattcgcaaggacatggacagt
atacgcaagacgcttggcatgtgcccacaacacaatgtcttattcaacgaactcactgtg
gaggagcacatttatttctatggccgtctcaaggggagaagctcagaggaagtcaaacag
gaaatagatcaaatgatcaaagacgtcgggctgccgcacaagcgcaaggatctcgccaag
aacctttcaggtggcatgcagaggaagttgtcggtcgccatagcgtttgtgggcgggtcc
gacgtggtgattctggacgagccgacagcaggggtggacccttatgccaggagaggaatc
tgggaactgctgctaaaatacaaaaagggccgtaccatcattctgtccacgcatcacatg
gacgaggcggacattttgggtgatcgcatcgccatcatctcccatggcaaggtctgctgc
tgtggttcatctcttttcctgaagaagacctatggcagaggttattacctgactcttgca
cgggccaatcaggacatgatgacaacgcagcgccacatagggggcaaacagctcagcgat
gcctccagtttggatgaagggctcggttcaggaagcatcagcaccatggagccagcagat
ttagatgatgtcactgccgtcatccgtttgcacgtcccgcaggcggagttcctagaggtg
ataggtcaggagatggtgtatgtgctgccttacactggctcaaaagatggaagctttgcc
tcactttttaaagagcttgatttagagaaagtgaggctggggatcagcagctacggaatc
tcggacaccagcttggaggagatatttctaaaagtggcagaagagacaggagttgatgtg
gaaacaaatgagaatgcaccgccgcttcagagagaccagaggagaagctctaaagtgtcc
agatcacgcagcatgagctcagctatggagcacaaagctactgcagcttctcaacaaaga
gaaaaaaagggaagattctcaaatcgagttgaagatggtcagcaatctgcaggtgtgaat
ggcagaggttcatatgtcatcactggctggcctctgattagacatcagtttctggcgttg
tttataaagcgatttcatcatgcaagaagaagcaggaaaggaatcattgcacaggtggtc
ctcccagcactgtttgtgtgtttgtctctgattttctctctgatcatcccaccgttcgtt
gagtaccccaatctggaactacaaccctggatgtatggaaaaccacagaacactttctac
agtgctgacaggacggatatggacgaggcaatgaaggtaacacgcgccctcctttctgaa
ccaggctttggcacccgctgcatggatggcaaccctatacctaaatacccttgcactcct
tcgggagcgacagactggttcactccttctgtagaccccgccatcctcgagatcttcaaa
aacggaaactggagcatgaagaatccatcgccagattgccactgcagcactcccggacgt
aatatgatgctaccagactgccttcctggtgctggaggattaccaccacctcagagaacg
cagaacaccacagataccctgcaggacctcacgggtcgaaatatgactgacttcctgctc
aagaactatgcaaagtctggaaaaatacggtatggagggatctcagttggagctataaac
tctcaagtcaaactcaacgaatctgagatcagtgcacttatttcagaccttaaggcattc
ttcaactcctcgcagaacaatatgactgagaagttcttccaggacttggagatcttactg
ttggatctgggaacaaaagacaatgtaaaagtgtggttctataaccagggatggcatgcg
gtggtgtccttcctgaatgtggccaataacgccatcctcaggggttatcttcctcccgga
gtacaacccaaactgtacggcatctcagcctttaaccatcctctcaatctcaccaaacaa
cagctcaccgccacattgatgtcaagctctacagacgtggtggtggcgatctgtgtgatc
ttcgccatgtcctttatccccgccagctttgtcctcttccttattcaagagcgtgtgagc
aaagctaaacacctgcagttcgtcagtggagtcaatcctactgcatactgggtggccaat
ttcacctgggacatgtgtaattacatcgtcccatgtatcatcgtgatcatcatcttcctc
tccttccaacaaaaagcatacgtgtcacctcagaaccttcctgcactcgtcctgctgttg
gtgctgtatgggtgggcaatcaccccgatgatgtacccggcctcgttcgtgttcagcgtc
ccaagcacagcgtatgtggtcctcacttccatcaacctctttatcggcatcaacggcagc
atcgcgaccttcatcctggagctgctcgatgatccgaacattactaatgtcaataccatt
ctaaagcaagtgttgttgatcttccctcatttctgtctgggtcgtggcctcatcgacatg
gccaagaatcaggccatggcaacgctttttatcagtctgggagaggataggtttgagaat
cccttgagctggcaaatggtggggaagaacctgcttgctatgtcgatacagggtgtagtc
atgttcgccttcaccctcgtcatccagtacaagttcttctgtaaacctaggttagtcacc
aggctgcctagaacggcaggagaagaggatgaagacgtggcccgagagcgtgatcgagta
cagagaggcagagcccaaaatgatctagtcaggatttgtgaccttaccaaggtgtactcg
ggtaagaaggtcccagcagtggacaggataactgtgggtgtcccagctgctgagtgtttc
ggcctgctgggaataaacggggcaggaaaaaccacaacttttaaaatgctgactggagac
atccgaccctcgagtggagaagccttcctgagcggatacagcatccgttcagagatgagc
caggtccatcagcacatgggttactgtcctcagtttgatgccattgatgacctcctaaca
ggacgagagcatctggagttctacgcacgcctccggggggtgccagagagagaggtcacc
aaggtagcggagtgggggatacagaaactgggtctggtgaaatactcgaacaaatccgct
ggtacctacagcggaggaaacaaacgcaagctgtccactgccatggctctgattggctgc
cctcctgtcgtctttctggacgagccgaccacgggcatggatcctaaagctcgccgtttc
ctttgggactgtatcctcagtgtgatcaaggaaggtcgttcagtcatccttacttcacac
agtatggaggagtgtgaggctctgtgcactcggatggccatcatggtcaacggtcagttt
aaatgtctgggcagcattcagcatctgaagagcaggtttggagacggatacacggtgatc
gtgcgtgtcagaggcgatctgagcacagtcgaggagtttgtaactcagacttttcccggc
agtgtgttgaaagagaaacaccacaacacgctgcagtaccagatgccccaccaagagggc
gctctctcgcatatcttcagccagttttgcaaaaatcaaaatgatctgggagtggaagac
tactcagtctctcaaaccacactggatcaggtgttcgtaaattttgcccgacagcagcac
gatgctgaagacggcgtctacgagaatactgtagatctgaatgatgaaataccaatgcag
tctcagaaccatactgtacacagcaagtaa
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integrated database retrieval system
