Clarias gariepinus (North African catfish): 128508533
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Entry
128508533 CDS
T10780
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Membrane trafficking [BR:
cgar04131
]
Endosome - Lysosome transport
Others
Others
128508533 (lrba)
Endosome - Golgi transport
128508533 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
128508533 (lrba)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128508533
NCBI-ProteinID:
XP_053335852
LinkDB
All DBs
Position
20:22868963..23094584
Genome browser
AA seq
2820 aa
AA seq
DB search
MADDRAPPGGKGIMPTVPIRGIRMKFAVLEGLLEAGEVTTRDVVETLFNLLVGGQFDLEM
NFIIQETESITCMVDLLDKCEVTCQAEVWSMFTAVLKKSVRNLQACTDVGLITLVLQRID
RMDSMIADLLVDMLGVLASYSITVKELKLYFSKLQGEKGQWPPHAVKLLSVLKSMAHRSG
PDAFFTFPGKSAAAIALPPIAKWPYQNGFTFHTWLRLDPMSNINVDKDKPYLYCFRTSKG
MGYSAHFVGGCLIVTALKAKGKGVQHCVKFDFKPQKWYMVTIVHIYHRWKNSEISCYVNG
ELMSSGELAWFVNTSETFDKCFLGSAETADANRVFCGQMGAVYVFNTELNAAQIFAIYQL
GPSYKGVFRYKAESDLLFADHHKSLLYDGKLSGSIAFTYNPRATDAQLCLESSPRDNTSI
FIHSPHALMLQDVKAVVTHSVQSAVHSIGGVQVLFPLFTQLDFVQPNSEEPDTSVSCTLL
SFLLELLKSSVAMQEQILACKGFLVMGYSLEKSSKVHVTRPVLDIVLSFARYLSNLPHGI
LLLKQLCDHILFNPAIWIHTPAKVQQVLYTYLATEFISTVTIYNAVRRVGTVLQVMHTLK
YYYWVVNPQDRSGVMPKGLDGPRPVQKEIHALRAFLLLFVKQLIMKDSGVKEDELQSILN
YLLTMHEDDNLMDVLQLLVALMSEHPTSMVQAFDQRNGIRVIYKLLASKSEGIRVQALKV
LGYFLRHLQPKRKSEVMLSHGLFSLLTERLLLHASQFSMTTYNVLFEVLTEQICTQVIHK
QHPEPDSTVKIQNPQILKVIAALLKNSASPESMEIRRVFLSDMIKLFNSSGENRRSLLQC
SVWQEWMLSLCFINPSNSDELKITEMVYTIFRILLYHAIKHEWGGWRVWVDTLSITHSKV
TFEQHKESLSHVFHEYQRMGSNGAAEIRTVSGTSGNSELNAELPETPLEPPSTIIELNVE
EQICGEHDDHEERAQVTVSNILARADEEDEEGKSEGSVQKKHNEGESEAPKEIQKSKESN
QEVDGGKDREGEDVEEKTDKNKVGGEDTSEAVDQKSLEAKSQEVETDQKASVEKILVKEE
DKIRTEDGTETKADSGEGLKESGRSETEKKEAVTPVQGDEEQEEKSSETSEESPSAEKAS
DMEVSPSTEVVQSADKATSVQESPSLETTFNSQEVPSVQESPNGDLSPSTEEDSSAQEAL
SAEESSSKQGSPSVETDPSTEKSPSTQEVSGAEVSPSTQQSPSVPESPNAERGLKPKEVK
IARLDVSSVAIDTERLELKDMSAAVGGQNQAGASTSAQNRDGSSSPSRSSMFRIPEFKWS
HMHQRLLTDLLFSVETDLQMWRSHSTKTVVDFVNSSENVVFVHNTVHLISQVVDNLIMAS
GGILPLLSAATSSTHELEAIDASQGLEVETSLSFLQRLISLVDVLVFSSSLNFTEIEAEK
NMTSGGVLRQCLRLVCTMAVRSCLECQHHSLYKSGMEKTQQGLLGNTKFIPAQSPVDMLT
GRISPVRDVERLLQDMDINRLRAIVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEP
HNDKRVNTHSSRSTESVSSDLENPSPLQRRDSTPANEHSPVSPSEAGESHSAPDAVSEAL
STLSSEVKGHEDTTDKDKKGKSVKVKDILRSLVSSSPADDVIVDTSLLPPAFLGKQEVQT
QFSSFDRSVVVASKKMGGTSAANPAPTSSSSSSSTHVPQSPTASAGGTPVVSVSMVTAGD
STPSSAAESGGPVSPSDLPSVPLSPTTTLSISERLEHALEKAAPLLREIFMDFAPFLSRT
LLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLS
HTMKDHLVRVANEAEFILSRQRAEDIHKHADFESHCAQYTAEKREEEKMCDHLIRAAKYR
DHVTATQLIQKIINILTDKHGAWGSSAHSKQCFWRLDLWEDDLRRRRRFIRNAFGSSHSE
ATLKSAAEHAPEDDVLKGQQLGKDTARSQISESESLPEGDDETLSSVEEKELDSLTGTVS
LSTVAELVSPALVMKGTLSITANELYFEVDEDEPSFKSVDPKLLPYADGLHGKWMFSEIR
AIFSRRYLLQNTALEIFLANRTSVMFNFADAATVKKVVHALPRVGVGTNFGLPQTRRISL
ATPKQLFKASNMTQRWQKREISNFEYLMFLNTIAGRTFNDLNQYPVFPWIISNYDSEELD
LTLPSNYRDLSKPIGALNPKRAAFFSERYESWEDEQVPKFHYGTHYSTASFTMMWLLRIE
PFTTFFLNFQGGKFDHADRTFSSVARAWRNCQRDTSDVKELIPEFFYLPEMFINANDYNL
GVMDDGTVVCDVELPPWAKSPEDFVRINRMALESEFVSCQLHQWVDLIFGYKQRGPEAAR
ALNVYYYLTYEGAVNLSSITEPLLREAVESQIRSFGQTPSQLLIEPHPPRSSAMQVTPLM
FTEQMQQDVIMVLKFPSNSPVVYVSAHTQAGLASPAIVTVTANRIFSINKWHGLTGHQSS
SNTEQQYQLPVEIDPVIVGNLMHRRQVCDLLDQSVEVNSHCFLVSADNRFLFIAGFWDKS
FRIYNTDTGKLVQIVFGHRDVVTCVFRSESYIGGDCYVLSGSRDATLLLWYWSGKHCCIG
DSHNDFVTPRAILTGHDCEVTCASVCAELGVVISGSRDGPCLLHSVSGELLRVFESSERP
MLMQASAEGHCVIYYRSGHVCVYNINGKLLRDTHIEDNIKAMLLSKDGQYLLCGGERGVL
TVWQVHDLKQLFTYPGCDAAIRSMAMTTDQRCIITGMASGSIVLFYNDFNRWHHEYRTRY
NT seq
8463 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacagagcgccccctggtggaaagggcatcatgcccacggtgcccatcagg
ggcatccggatgaagttcgccgtgctggaggggctcctcgaggctggcgaggtgacgacc
cgggacgtcgtggagacgctgttcaacctgctggtcggcggtcagtttgacctggagatg
aacttcatcatccaggagacagagagcatcacatgcatggtggacctgctggataagtgt
gaggtcacgtgtcaggcggaggtgtggagcatgttcacggccgtgctgaagaagagcgtg
aggaacctgcaggcctgcaccgacgtcggtctcatcacactcgtcctgcagaggatagac
aggatggacagtatgatcgcagacctgctggtggacatgctgggtgttttggcgagttac
agcatcacagtgaaggagctgaagctctatttcagtaaactgcagggagagaaaggacag
tggcctcctcacgctgtgaagctgctgtcggtgttgaagtccatggctcatcgctccggc
cctgacgcgttcttcacttttcctggaaagagcgcggcggctatagcacttccacccatc
gctaaatggccgtaccagaacggcttcaccttccacacctggctgcgtctggatccaatg
agcaacatcaacgtagacaaagacaagccgtacctgtactgttttcggacgagtaaaggt
atgggttattcggcccatttcgtcggcggatgtctgatcgttaccgcgctgaaggccaaa
gggaaaggagtccagcactgcgtcaagttcgacttcaaaccccagaagtggtacatggtg
accatcgtacacatctaccatcgctggaagaacagcgagattagctgctatgtgaacgga
gagctgatgtcatccggagagctcgcgtggttcgtcaacaccagtgagacgtttgataaa
tgtttcctgggctcggcggagacggcggacgctaaccgcgtgttttgtggccagatgggg
gcggtgtacgtgttcaacaccgaactcaacgccgcacagatcttcgccatctatcagcta
ggcccctcctacaaaggcgtgtttaggtataaagccgaaagcgacctgctgtttgcggat
catcacaagtctctgctgtacgacggaaaactgagcggcagcatcgccttcacctacaac
ccccgcgctacagacgcccagctgtgcctcgagtcatcgcccagagacaacacgtccatc
ttcatacactctcctcatgccctgatgctgcaggatgtaaaggctgtggtcactcactcg
gtgcagagtgctgttcactctataggaggagtgcaggttctcttccctctcttcactcag
ctggactttgtgcagccgaacagcgaggagcctgacacctctgtctcctgcactctgctg
tcgttcctgttggagttgttgaagtcgtcagtagcgatgcaggagcagatcctggcctgt
aagggcttcctcgtcatgggatactccctggagaagtcttccaaagtccacgtaacgaga
cccgtgctggacatcgtcttgtcattcgctcggtatctgagtaacctgccccacggcatc
ttactgctcaaacagctgtgtgatcacatcctgttcaacccagccatctggatacacaca
ccagcaaaggtgcagcaggtcttgtacacgtatctggccaccgagtttatcagcacagtg
acgatctacaacgccgtgcgccgggtggggaccgtgctccaggtcatgcacacgcttaaa
tattactactgggtggttaatccacaggaccgcagcggagtgatgcctaaaggcctcgat
ggtccgaggcccgttcagaaggagatccacgctctcagagcgttcctgctgctcttcgtc
aagcagctcattatgaaggattcaggagtcaaggaagatgagctgcagagcatcctaaac
tacctgctcactatgcacgaggatgataacctgatggacgtcctgcagctgctcgtggcg
ttgatgtccgaacacccaacttccatggtgcaggcgttcgatcagcgtaacggcatccgg
gtcatttacaagctcttggcgtctaaaagtgagggaattcgagtgcaggcgctgaaagtc
ttgggttatttcctccgtcatttacagcccaagaggaagtccgaggtcatgctgagtcat
ggtttgttttcgctcctgaccgaacgcctgctgctgcacgccagtcagttctccatgacc
acctacaacgtcctgttcgaggttctgacggagcagatctgcacgcaggtgatccacaag
cagcatcctgaacccgactctactgtcaagatccaaaacccacagatcctaaaggtgatc
gcggcactgctgaagaatagcgcgtctcctgaaagcatggagattcgccgagtctttctg
tccgacatgattaaactgtttaacagcagcggagaaaacagaaggagcctcctgcagtgc
tcagtgtggcaggagtggatgctctctctctgctttataaatccgagcaacagtgacgag
ctgaagatcacagagatggtgtacaccatcttccgcatcctcctctatcacgccatcaag
cacgagtggggaggctggcgcgtgtgggtcgacacactctccatcacacattccaaggtc
accttcgagcagcacaaagaaagcttatcccatgtcttccacgaataccagcgaatgggt
tccaacggcgccgctgagatcagaactgtatccgggacgagcggaaacagtgaacttaat
gcagaattaccagaaacaccactagaaccaccatccaccattatcgagctaaatgtggaa
gagcaaatctgtggagaacatgatgaccacgaggaaagagcgcaggtcaccgtttcaaac
atcttggccagagctgacgaagaggacgaggaaggaaaaagtgaaggctccgttcagaag
aaacacaatgaaggtgaatcagaggcacctaaagagatacaaaagagtaaggaaagcaat
caggaagtagacggaggaaaggatagagaaggagaagatgtggaggaaaagacagacaaa
aataaagtgggtggtgaagacacgagtgaagcagttgatcaaaaaagcttagaagcaaaa
agccaggaagtggaaactgatcagaaagccagtgtagagaagatcttggtaaaagaagag
gataaaatcagaactgaagatggaacagaaacaaaggctgattctggtgaaggattaaaa
gaatcaggacgaagtgagactgagaagaaagaggctgtgactccggttcaaggagatgag
gaacaggaggagaagtcgtctgagacgtctgaagagagccccagtgcagaaaaggcttca
gacatggaggtgagccctagcacagaagtggtccaaagtgcagacaaagctactagtgtc
caagaaagccctagtttggagacgacctttaactcgcaggaggttcctagtgttcaggag
agtcctaacggggatctgagccccagcacggaggaggactcaagtgcacaagaggccctc
agtgcggaggaaagctccagcaagcaggggagccccagtgtggagacggaccctagcaca
gagaagagcccgagtactcaagaggtctctggtgcggaggtgagtcccagcacacagcag
agtcctagcgtcccagagagccccaatgcagagagaggtttaaagcccaaagaggttaaa
atcgccagacttgatgtctccagcgtggccatagacacagagcgactggagctgaaagac
atgtcagctgctgtcggaggccaaaaccaagcaggagccagcacatctgcgcagaacaga
gacggttcctcgtccccctctcgttccagcatgttccgtatcccggaattcaagtggtct
cacatgcatcagcggctgctgaccgatctgctgttctccgtcgagacggacctgcagatg
tggaggagccattccactaagacagtggtggactttgtgaacagcagtgagaacgtggtg
tttgtgcacaacacggtgcatctgatctctcaggtggtggataatctgatcatggcatct
ggaggaatcctgcctctgctctccgcggccacttcgtccacgcatgagctggaagcgata
gacgcgtcccagggtctggaagtggagacgtccctgtccttcctacagcgtctcatctcg
ctggtggacgtcctcgtcttttccagctctctaaacttcactgagatcgaggcggaaaag
aacatgacgtcgggaggagtgctgaggcagtgcttacgcctcgtgtgcactatggctgtg
aggagttgtttggagtgtcagcatcactctctttataaatccggaatggagaaaacacag
caaggccttctgggaaataccaagtttattccagcacagagtccagtggacatgctaaca
ggaaggatctctccagtccgagacgtggaacgtctgctgcaggacatggacatcaaccgt
ctccgagccatcgtcttcagagacattgaggacagtaagcaggctcagtttttggccctg
gccgttgtttacttcatctctgttctcatggtgtccaaataccgagacattctggagccg
cacaacgacaagagagtcaacacacactcttctcggagcacagagagcgtcagttctgac
ttggaaaacccctcccccctccaacggcgtgactccacccccgcaaacgagcactcacct
gtttccccgagcgaggccggcgaatcccactcggcgccggacgccgtctccgaggctctt
tccacgttgtcgtctgaggtcaaagggcacgaggacaccacggacaaggacaaaaaggga
aagagtgtgaaggtgaaagacatcctgaggagcctggtaagctcctccccggcagatgat
gtcatcgtggacacgagtctcttaccaccagcgtttttggggaagcaagaagtccaaact
cagttcagctcattcgacaggagtgttgttgtagcgtctaagaaaatgggcggaacttca
gcagcaaaccccgcccccacttcctcttcctcctcgtcttccacacacgtcccacaatcc
cccactgcctccgcaggtggaactcctgttgtcagcgtttctatggttaccgcaggtgac
tccaccccgagcagtgctgcggagtcaggaggaccagtgagcccctctgacctgccatct
gttccactctcacccaccaccaccctgagtatctctgagcgtctggaacacgctctggag
aaagcagccccgttgctgcgagagatcttcatggacttcgctccattcctgtcgcggacg
ttactcgggagtcacggacaggagctgctgatcgagggaaccagtctggtgtgtatgaag
tccagtagctctgtagtcgagctggtcatgctgctgtgttcccaggaatggcaaaactcc
atccagaagaacgcaggtttagctttcatcgagctcgttaatgagggaaggttgctgagc
cacactatgaaggatcatctcgtccgtgtggcgaacgaagccgagttcattctcagtcga
cagagagccgaggacatacacaaacatgccgattttgagtctcactgcgctcagtacaca
gcagagaagcgcgaagaagagaagatgtgtgatcacctgatccgagccgcaaaataccgt
gatcatgtgaccgccacgcagctcatccagaagatcatcaacatcctgactgacaaacat
ggggcctggggaagctccgcccacagtaagcagtgtttttggcgtttggacttgtgggag
gacgacctgcggagacgtcgccgcttcatcagaaacgcttttggctcatcacattcggag
gccacactcaaatctgcagccgagcatgctcccgaggacgatgtgctgaagggacaacag
ctcgggaaggacacggcgaggagtcagatctccgagagtgagagtctgcccgagggagac
gacgagacgctttcatctgtggaggagaaagagctggacagtctcaccggcacggtgtct
ctcagcacggtagccgagctggtctcccccgcacttgtcatgaaaggaactctgtccatc
acggctaacgagctttacttcgaggtggacgaagacgagccgagcttcaagagcgttgac
cccaagttgttgccgtatgcggacggactacacgggaagtggatgttctcagagatccga
gcgatcttctcgcggcggtacctcctgcagaacacagcgctggagatcttcttagccaat
cggacctcggtgatgtttaacttcgccgacgccgcgacggtgaagaaagtggttcatgcg
ctgcccagagtcggagtcggcactaacttcggcctcccacagaccaggcggatttctcta
gcgactcctaaacagctctttaaagcctccaacatgactcaacgctggcagaaacgcgaa
atctccaacttcgagtacctcatgttcctcaacaccattgcaggacgcacatttaacgac
ctgaatcagtatcccgtgtttccctggatcatcagcaactacgacagtgaagagctcgac
ctcacactgcccagcaattacagagatctgagcaagccgatcggagccctgaacccaaag
agagccgctttcttctccgaacgctatgaatcctgggaagacgagcaagtccccaaattc
cactacggcacacactactccacggccagcttcaccatgatgtggctcctgaggatcgag
ccgttcactacgttcttcctcaacttccaaggagggaagtttgatcatgcagaccgaacc
ttctcctccgtcgccagagcctggaggaactgtcagagagacacgtctgatgtgaaggag
ctgatccccgagttcttctacctgccagagatgttcattaacgctaacgactataatctg
ggagtgatggatgatgggactgtggtgtgtgatgtcgagctgccgccgtgggcaaagagt
ccggaggactttgttcgcatcaaccgcatggcactggagagtgagtttgtgtcgtgtcag
cttcatcagtgggtggatctgatcttcggctacaagcagcgtggaccggaagcagcgcgc
gccctcaacgtctactactacctcacctacgagggggcggtgaacctcagctccatcact
gagccgctgctgagagaggctgtagagtctcagatccggagttttggtcagactccatct
cagctgctgatcgagcctcatccaccacgaagctccgccatgcaggtgacccccctgatg
tttacggagcagatgcagcaggacgtgatcatggtgctgaagtttccctctaactccccg
gtggtgtacgtctcggctcacacccaggccggcctggccagccccgccatcgtcaccgtc
acggccaaccgaatcttctccattaacaagtggcacggcctcaccggtcaccagagctcc
tcgaacacggagcagcagtaccagctaccggtggagatcgaccctgtgatagtgggtaac
ctgatgcaccgcagacaggtgtgtgatttattggatcagagcgtggaggtgaactcacac
tgcttcctcgtctcggccgataatcgcttcctcttcatcgccggcttctgggacaagagc
tttcgcatttacaacactgacacagggaagctggtacagatcgtgttcggtcaccgtgac
gtggtgacgtgtgtattccggtccgagtcgtacatcggaggcgactgctacgtgctgagc
ggctcgagagacgccacactgctgctgtggtactggagcggcaaacactgctgcatcggc
gactcacacaacgactttgtgaccccgcgagcgattttgacgggccatgactgtgaagtg
acctgcgcaagtgtgtgcgcggagcttggagtagtcatcagcggctccagagacggtccg
tgcctgttacactcagtgagcggagagctgctgcgtgtgttcgagagcagcgagaggccg
atgctgatgcaggcgagcgcagagggacactgcgtcatctactaccgctccggacacgtg
tgtgtgtacaacatcaacggcaaactgctgcgcgacacacacatcgaggacaacatcaag
gcgatgttgttgagtaaggatggtcagtacctgctgtgtggtggagaacgcggggttctc
acagtgtggcaggtccatgatctcaaacagctcttcacttatccaggctgcgatgccgcc
attcgctccatggccatgaccactgaccaaagatgtatcattaccggcatggcgtctggc
agcatcgttctcttctacaacgacttcaacaggtggcaccacgagtaccgaacccgctac
tga
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