Clarias gariepinus (North African catfish): 128508635
Help
Entry
128508635 CDS
T10780
Symbol
arhgef40
Name
(RefSeq) pleckstrin homology domain-containing family G member 4B
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128508635 (arhgef40)
Membrane trafficking [BR:
cgar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128508635 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
IQ_SEC7_PH
KIAA1755_C
PH
DHC_N2
Motif
Other DBs
NCBI-GeneID:
128508635
NCBI-ProteinID:
XP_053336015
LinkDB
All DBs
Position
20
Genome browser
AA seq
1781 aa
AA seq
DB search
MGSEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDFFIPAKHLLH
RLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSSDFYLQVVPFSTRCPRLA
LKCLALGGRNVQEVLVPESQHSLVFTAEWLHCINKERGCKREGGGGLDTCLVSTSDGVVR
IPWDEVVYPKLLHNPTDLEHPSTHPPALDYLSPNTGSLGWCTSSGDPDTWSWDEEDDLPP
DGDEADIDSTLRHLRQASDGCGDYVDLLEPRGGPDGGTDFKQRYLEMHGICKNKTLPLCR
RSKAIRIRRGKAWGYAKTEISGRTGSLRRRDSNSSRKNSGSARTDLANSRPPPRVIDLAR
EREASAQCVQASYECGGDAGVLDTRDLYLEGPTKERRPGVGEERKGAGSTLPWEERHRGR
ASSSELSSRSKYISETETHTAGNIAADQSDQDQGFHSDCVFEDDKSLAEGDTLTKAAAGL
NSVSDFSRHLANRSKGKLNTQPDSSQNKELNTPQNDQNTTNSGKSKGQKGKLNEHRKPEK
NLSQTGTDNISGERQVGKLDERVCPRGKDVKVGGFRAPRRRRKAKGKGKGKAGGRGNPKN
KEEPSSSKSQKKASHLEETSDSSAKFPLSKDSHSNEGKNTLKDIANGHEADSKPADGTGE
KQPEGQPDILPDAKVQSDIDHSPEETVPSPPSDQSQAPSPKAPLLLRELNEDLLQSGKFM
LTGTVDRLGHGLVITEAHVPEEGYNHNDIVQLLSCYYTITRPAAREKGLTVLLDSRQASP
SELCFSALRSFKALVPAGLGCVLILTGEEQESGPYNLNGIEVYTVKGTGVLQQYVDKQQL
TKELDGDFEHSHNDWLSFRLSLEQLTERCENVLSLLEDALKSMGTEPLPDCIKSVPLSVE
KHKQLMTGVLSDQRLTELQRRGGAWLAGLANGTSRLAHRSPDCRAALAETSRLYDSIDDS
LHRLVRVSNQRSHELEALSRLATLVDKLDKCEKDIDHVQEQLEEYRDPPLSLSRLSLKQQ
KFKSFRASAMELHSQTLVVLGEVENWSELVWEGLTAVLKRLPLIREKVRGMSHCISDCWT
QLDNTQRLLSTLTEASQWCDVVSSSSPQSQPSSPLSSLPPIPPSRFQDARALALELGGGA
LLDLWAQTLERYQRTLANFKTRMLQAERGMPTVQGPDPSVAMAQTSPKTPAASTSSLWEL
EGEGEGEWCGGGGEGGLQSWGSLASLFRPQNCSTLKIGEEKKKEGASGTAGGGKFLQNLL
NPSKKSPTEAPLPPKPPRRRHPSFDLQALLAPRRSAAATPKAAEAPLSVSSRSSPLSWLG
RKAIAEPILTAGIATAVPGWKEEKVGGGVAGGGVLIRGVEVSSKEVADHTGFSRQHVLLG
RTDRETAGERPGTTAQSKLYLQWCRLVNSERQYVALLKAVEETYFPLLDSPDTPLCLRGK
ADSIFSNWSSLATFHSQLLLPAIEGALSQTLQQTDCFSKYRDQLLQYSHYIRMKPEPDSL
LVSQAADFFKAKLSSSPLLSTISFPQCLAAPIQRLQHYCEILEELGGVNPGPDSALSIIR
HAQRHGEDLRISDLITGCPVPVAERGDLVRQGELYVCPGGRRKKTGIRTVFLYQHYIIIA
KHKIPSQGCSVYTFKNSIKTGEMGLTQSVGEEGLRFEVWVRQTSRTKTCLTLQAASSEDK
EAWTHDIAQLLWTHAIHNTELCLKESLCMGVSSKLLLDVSGAQTSELDSSFSLNDRVQSS
CSDSSSVGSQKEGSSPSISREPKEESAQTGLTQNSSPSTSV
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagaggctgtggaggactgtgtacagggggcgctctcttccctctatccccca
tttgagagcactgcaccccctctcctatcccaggttttttctgtcttggagtccacctat
cagcatgacagtttaaggtacctgctggatttcttcatcccagctaaacatcttctccac
agacttcagcagcatgcttgctctcagtatttgggctgtttgttcctccactctggttgg
cccctgtgtttgggagagaaggtggtggtccagctatctacacttgactggaggctcttg
cgaagcagtgacttctacctgcaagtggtgccattctccacgcgctgtccccgcctggct
ctcaagtgtttagctttgggtggtcgcaatgtccaggaggtcctggttcctgaatcccag
cactctctggtgtttacagcagagtggctgcattgcatcaataaggaacgtggttgcaag
agagaaggtggaggtggtttagacacttgtctggttagtacttctgatggagtagtacgt
attccgtgggatgaggtcgtttacccaaaattgctacacaaccccactgacctggagcat
ccttccacacatccacctgccctggactacctatctccaaacactgggagtctgggatgg
tgtacttcttctggagatcctgacacctggtcctgggatgaagaggatgatcttcctcca
gatggagatgaggctgatattgactctactctgcggcacctcagacaggccagtgatgga
tgtggagattatgtagacctacttgaacctcgaggaggtccagatggtggcaccgatttt
aagcagcgctacttggagatgcatgggatctgcaagaacaaaactttgccgctgtgcagg
cgaagcaaggcaattcgaattcgtcgggggaaggcctggggctacgcgaagaccgagatc
agtggaaggacaggaagcttacgtaggagagacagcaacagcagcagaaagaatagtgga
agtgctcgcacagatttggccaactctagacccccaccccgtgtcattgatttggccaga
gagagagaggcatctgctcagtgcgttcaggcctcatatgaatgtggcggagatgcagga
gtcttggatactagggacctttatttagagggtccaaccaaggagagaaggcctggcgtc
ggtgaggaaaggaagggagctggaagtacactaccctgggaagaacgtcatagaggaaga
gccagcagtagtgaactaagctctagaagtaaatatatcagtgaaacagagactcatact
gcaggaaatatagcggcggaccaatcagatcaggatcaaggatttcactcagattgtgtt
tttgaagatgataagtcactggctgaaggtgacacattgactaaggctgcggcaggttta
aatagtgtgtctgattttagcaggcatctggctaacagatcaaaaggaaagcttaacacg
caaccagattcatctcaaaacaaagagttaaatactccccagaatgaccaaaacacaaca
aactcaggaaagtccaaaggacaaaaaggaaaattgaacgaacatagaaaaccagaaaaa
aatctctctcagacaggtaccgacaacatctctggtgaaaggcaagttggaaaattggat
gaacgtgtgtgccccaggggaaaggatgtcaaagtgggaggatttcgagcacccaggaga
aggaggaaagctaaggggaaagggaagggcaaagctggtggccgtggcaaccctaaaaac
aaggaagaacccagttcctcaaagagtcagaagaaagcaagccacttagaggaaacatct
gattcctcagctaaatttcctctctccaaagatagccattcaaatgagggtaaaaataca
ctaaaggacatagcgaatggtcatgaagctgattctaaacctgctgatgggactggagaa
aaacaaccagaaggccaaccagacatcttaccagacgccaaggttcaatcagacatagat
cattccccagaagagacagtaccatcaccaccttctgaccaatcacaagcaccatctcca
aaagcccctcttctacttagagagttgaatgaagacctgctccagtctggaaagttcatg
ttgacaggtactgtggatagactgggccatgggttggtcattacagaagcacacgttcct
gaggaaggttataatcacaatgacattgtgcagctgttatcctgttattacaccattaca
agacctgcagctagagaaaagggcttaacagtgctgttggacagtagacaggcttctcct
tctgagctttgcttctctgccttgaggtcattcaaggctctggtaccagcaggccttggc
tgtgttctcattcttacaggcgaagagcaagaatcaggcccatataacctgaatggcata
gaggtatacacagtaaaaggaacaggagtccttcaacagtatgtagataaacagcagctg
actaaagaattggatggagactttgaacactcacataatgactggttatccttcagactg
agcctggaacagctgactgaacgctgtgagaatgtcctctctcttttggaggatgcacta
aaatctatgggcacagaacctctgcctgactgtattaagtctgtaccactaagtgttgaa
aaacacaagcagctgatgactggtgttctatctgaccaacggttgacagagctacaaaga
cggggtggggcttggctggctggactggctaatggaacgtccagattggcacacaggtca
ccagactgcagagctgccttagccgaaacctccagactctatgacagcattgatgattca
ctgcaccgattggtgcgtgtttctaaccaaagaagtcatgaattggaagcacttagtaga
ctggcaactctagtggacaaactggataagtgcgagaaagatatagatcatgtgcaggag
caactggaggaatacagggatcctcctctgtcactaagccggctctcactcaaacagcag
aagtttaaaagtttcagggcatcggccatggaacttcacagtcagacactagtggtgcta
ggcgaggtcgagaattggtctgagttggtatgggaaggtctgacagcagtcctaaagcga
cttccattgatcagagagaaagtgagaggaatgtctcactgcatttctgactgctggacc
caactggacaacacccagagactactctcaactcttactgaggcctcccagtggtgcgat
gtggtctcttcctcctctccgcaatcccaaccatcctctcctctgtcctctctcccaccc
atccctccgtcccgttttcaagatgcacgagctctggcccttgagcttggtggcggcgct
ttgttggacctgtgggcccagaccctggagcgttaccaacgcacactagcaaacttcaag
acccgcatgcttcaggctgaacgtggcatgcccaccgtccagggtccggatcccagtgtg
gccatggcacaaacatcaccaaaaacacctgccgccagtacttctagtttgtgggagtta
gagggcgaaggagagggagaatggtgtggaggaggaggggaaggagggcttcagtcttgg
ggttcactggcctcactgttccgtccacagaactgctctacactgaaaataggggaagag
aagaagaaggagggagcttcagggactgcagggggagggaagttcctgcaaaacttgcta
aacccaagcaagaaaagtcccactgaagctccccttcctccaaaaccgccccgaagacgt
catccaagctttgacctccaagccttgcttgcaccccgtcgttcagctgcagccacacca
aaggcagcagaggctccacttagcgtgagcagtcgctcttctcctctgtcctggctggga
aggaaagccattgctgagcctattctcacggcagggattgcaacagctgtaccaggatgg
aaggaagagaaagttggaggaggtgtagcaggagggggtgtcctgatccggggtgtggag
gtcagcagtaaggaagtggcagatcatacagggttctccaggcagcatgtgctacttggc
cgaacggatcgagagacagcaggggagaggcctggcactactgcacagagcaagttgtat
ctgcagtggtgcaggttggtcaattcggaaaggcagtatgtagctctactcaaggctgtt
gaggagacttacttccctctgctggatagtcctgatacaccactctgcttgaggggaaag
gctgactcgatcttttccaactggagcagccttgccacttttcattcacagttactcctt
cctgcaattgagggtgctctctctcaaacgttacagcaaactgactgcttcagcaaatat
agggaccaattacttcagtactcccactacatccgtatgaagccagagccggactccctg
ctggtcagccaagctgccgatttcttcaaggcaaagctgtccagctctcctctgctttcg
acgatctccttccctcagtgccttgctgctccaattcaaaggctacaacattactgtgag
atccttgaggaactggggggagtaaaccctggacctgattctgccctctccattattaga
catgcacaacgccatggggaggacctgaggatcagtgacctcatcactggctgcccggta
cctgtggcagaacgtggggatttggtgcgtcagggagagctatatgtttgtccaggggga
cggagaaagaagacgggcatcaggactgtattcctctaccagcattacattattattgcc
aaacacaaaatccctagccaaggctgcagtgtttacacatttaaaaacagcattaagaca
ggagagatgggtttaacccaaagtgttggagaggagggtctgagatttgaggtttgggtg
agacagacatctcgcaccaaaacctgtctcactctccaggccgcatcttcagaggacaag
gaagcctggacgcatgacattgcccagctcttgtggacgcatgccatccataacacagaa
ttgtgtctaaaggaatctctgtgcatgggagtgtccagcaagttgctgctggatgtgtca
ggagctcagacatctgaactagactcgagtttcagccttaatgacagagttcagagtagc
tgttcagactcttcctcagttggaagtcagaaagaaggaagttctccctccatttccaga
gaaccaaaggaagagtcggcgcaaactggcctcacacaaaactcatcaccatcaacctcc
gtttga
DBGET
integrated database retrieval system
