Clarias gariepinus (North African catfish): 128508649
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Entry
128508649 CDS
T10780
Symbol
dctn1a
Name
(RefSeq) dynactin subunit 1a
KO
K04648
dynactin 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04814
Motor proteins
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128508649 (dctn1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128508649 (dctn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128508649 (dctn1a)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128508649 (dctn1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128508649 (dctn1a)
Membrane trafficking [BR:
cgar04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
128508649 (dctn1a)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
128508649 (dctn1a)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
128508649 (dctn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
SPX
Motif
Other DBs
NCBI-GeneID:
128508649
NCBI-ProteinID:
XP_053336044
LinkDB
All DBs
Position
20:complement(22095078..22114111)
Genome browser
AA seq
1227 aa
AA seq
DB search
MSADGGKPVKVGSLVEVIGKGQRGTVAYVGATLFASGKWVGVILDEPKGKNDGTVQGKSY
FTCKENHGIFVRQSQIQLIEDGGSSATSPDTPESGIPRMPRKEIGETPGKGSKQTGRPSS
TASDLSGSVLVENEPATPSQSALGAPMMPQPSRTPSEPPSVPAPSLSSKEEEALRAQVKD
LEEKLETLRIKRTEDKAKLKELEKHKIQLEQLQEWKNKMQEQQNDLQKQLKEAKKDVREA
QEAKDRYMEEMADTADAIEMATLDKEMAEERAESLQQEVESLKEKVEELTMDLEILKHEI
EEKGSDGAASSYQVKQLEEQNARLKEALVRMRDLSSSEKQEHVKLQKQMEKKNTELETLR
VQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVSDLEA
INEMNDELQENARETELELREQLDLAGARVREADKRVEAAQETVADYQQTINKYRELTTH
LQEMNRELTNQQSATAEQLQQPPAELFDFKIKFAETKAYAKAIEMELRKMEVQQANRQVS
LLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQEKFNLNEDVTERTGLRGSA
GEQLSFASGLVYSLTMLQATLHKYEQALNQCSVDVFKRMGTLHSEMSVHERSLDFLIELL
HKDQLDETVQVEPLTKAIKYYQQLYSIHLADQTEDCTVQLADHIKFIQSALDCMGAELGR
MRSFLQPGQEGSELMLLLKELDTSCGDVRQFCKKIRRRMPGTDAPGIPAALSYSPQVGEA
LAESRKQLGCVVAVLQETAAAGAQLISTLSEQEGLSAHTLEDGVFKAIEQIYGLHGENPR
ECLRQSCSAVIATMNKMATAMQEGEYDSEKPQHVPPPVELRSAALRAEITDAEGLGLKLE
DRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDTSTKDADERVEKIQTKLDETNTLLK
KKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSRMTIEGLRGTPASGIASIVAGGTPG
GAVSGIASVSGSVQVVDSPLLKQQMDVQRLAMKHLKNENYRLKAEKMKSQLASLPPLSAP
NMTGVMKDGSLSDGVSGNLYRKTDLLLSSLLKMSAGVKVVDITGKTPVSASAQLLEQTAR
LQSLSDALDKLKNEVSEHVVNQQVGARVRSDFATFPSSTFIKAEGEKKCGTVLVGKVMIP
CARGQEKSHSLILSQHQLQRVHHLLMT
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggacggagggaagccggtgaaggtgggctctctggtggaggtgatcggtaaa
ggccagcgcggcacggtggcgtacgtcggcgccacgcttttcgcctcagggaaatgggtc
ggagtcatcctggatgagccgaagggcaaaaatgacggcaccgtgcagggcaagtcttac
ttcacctgcaaagagaatcatgggatattcgttcgccagtctcagatccagctgattgaa
gatggaggaagctcggctacgtcgccggacacaccggagtcgggcatccctcgaatgcct
cggaaagaaattggggaaacacctggaaaaggaagcaaacagaccggccgcccctctagc
actgcctcagacctctccggatcagtcttggtggagaacgaacctgccactccttcccag
agtgcgctgggggctcccatgatgccccagcccagcaggacgcctagtgagcccccaagt
gtccctgctccctctctgtccagcaaagaggaggaggctctgcgcgcccaggtaaaggat
ctcgaagagaagttagagactctgcgtataaagagaaccgaggacaaagccaagctgaag
gagctcgagaagcacaagattcagctggagcagctgcaggagtggaagaacaaaatgcag
gagcagcagaacgacctgcagaagcagcttaaagaagccaagaaggacgtgcgtgaggct
caggaagctaaagaccgctacatggaagagatggctgacacagcggacgctatcgagatg
gccactctggataaagaaatggccgaggaaagggcggagtctctgcagcaagaagtggag
agcctgaaggagaaagtggaggagttaaccatggacctggagatccttaaacatgagatt
gaagagaagggttcagacggtgcagcctccagttaccaggtgaagcagctggaggagcag
aacgcacggctcaaagaggcgctggtcaggatgcgtgacctgtcatcatctgagaagcag
gagcacgtgaagctgcagaagcagatggagaagaagaacacagagctagagactctgaga
gtgcaaaaggagaaacttcaggaggagatgaagcaggctgaggctaccatcgatgagctc
aaagagcaggtggacgcggcactgggagcagaagagatggtggaaacgttgactgagaga
aatctggatctggaggagaaagtgagagagctgagagaaaccgtcagtgatttggaagcg
ataaacgagatgaatgacgagctacaggagaatgcacgagagacggagctggaactgcgc
gagcagctggacctggcaggagctcgagtccgagaggccgacaagagggtggaagctgcg
caggagaccgtggccgactatcaacagaccatcaacaaatacagggagctcaccactcac
ctacaggaaatgaatcgagagctgaccaatcagcagagtgctacagccgagcagctccag
cagcctcctgccgagcttttcgacttcaagattaaattcgccgagaccaaggcttacgcc
aaggccattgagatggagctgcgtaagatggaggtgcagcaggcgaacaggcaagtgtcc
ctgctcacatccttcatgcccgactccttcctgaggcacggaggagatcacgactgcatc
ctggtgctgctcctcatccccagactcatctgcaaggcggagttgatcagtaagcaggcc
caggagaagttcaacctaaacgaggacgttacggagcgcaccggtctgcgcggatccgcc
ggggagcagctgagcttcgcctcgggtctcgtgtattccctcacaatgctccaggccacg
ctgcacaaatatgagcaggcgttaaaccagtgcagtgtggatgtgtttaagcggatggga
actctgcactctgagatgagcgtacacgagcgttctctcgacttcctcatcgaactactg
cataaagatcagctagatgagaccgtgcaggtggagcctctcaccaaggccatcaagtac
taccagcaactctacagcatccacctggctgatcagactgaagactgcaccgtgcagctg
gcagaccacatcaagtttatccagagtgcgttggactgtatgggggcggagctgggacgc
atgcgttcgttcctgcagcctggtcaggaggggtcggagctcatgctgctgctaaaggaa
ctggacacttcctgcggagacgtccggcagttctgtaagaaaatccgcagaaggatgccg
ggaacagacgcaccggggatccctgcagcactttcttattctcctcaggtgggcgaggcc
ctggcggaaagcaggaagcagctgggttgtgtagtcgcggtgctgcaggagacggcggca
gcaggagcgcagctcatctcgaccctctcggagcaggaggggctcagcgcacacacactc
gaggatggagtctttaaagcaatcgagcagatttacggtttgcacggcgagaacccacgc
gagtgcctgcgccagtcctgcagcgccgtcatagcaaccatgaacaagatggccaccgcc
atgcaggagggagaatatgactctgaaaaaccgcagcatgtgcctccccctgtagagctg
cgctctgctgctctgagagccgagatcaccgatgctgaaggacttggcctcaagctggag
gacagagagacggtcattaaggagcttaagaagtccctcaaaatcaagggggaggagtta
agcgaggcgaacgtgcgtctgagtttgctcgagaagaagttggacacgtctactaaagac
gctgacgaacgggtggagaagatccagaccaaactggatgagacgaacaccctgctgaag
aaaaaagagaaggagtttgaggagaccatggatgcgctgcaggctgatattgaccagctg
gaggcagagaaggcagagctcaaacagagactcaacagccaatcacggatgaccatcgaa
gggttgcgtggaacaccagcatctggcatcgcctctatcgtcgcaggaggcactccagga
ggtgccgtctctggtatagcaagtgtatcaggtagtgtgcaagtagtggattctcctctc
ctgaagcagcaaatggatgttcagaggcttgcgatgaaacacctgaagaatgaaaactac
agactcaaggcagagaagatgaagtcccaactggcgtctcttcctcctctgagcgcaccc
aacatgaccggtgtgatgaaggacggctcgctgagcgacggcgtttccggaaacctgtac
cggaaaacggacctgctgctgagcagcctgctcaagatgagcgccggcgtcaaagtcgtg
gacatcacgggaaaaacacccgtaagtgccagcgctcaactgttggagcagacggctagg
ctgcagtctctcagtgatgccctggacaaactaaagaacgaagtatcggagcatgtagta
aaccagcaagtgggagctcgagttcgctccgattttgccacattcccttcatcgactttc
atcaaggcggagggtgagaagaagtgtggcaccgttctggttggtaaagtgatgatcccg
tgtgctcgcggtcaagaaaaatcccactccctcatcctgtcgcagcatcagcttcagcgc
gtccaccacctcctcatgacctaa
DBGET
integrated database retrieval system
