Clarias gariepinus (North African catfish): 128508664
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Entry
128508664 CDS
T10780
Name
(RefSeq) serine/threonine-protein phosphatase PP1-beta catalytic subunit
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03015
mRNA surveillance pathway
cgar04114
Oocyte meiosis
cgar04218
Cellular senescence
cgar04261
Adrenergic signaling in cardiomyocytes
cgar04270
Vascular smooth muscle contraction
cgar04510
Focal adhesion
cgar04810
Regulation of actin cytoskeleton
cgar04910
Insulin signaling pathway
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128508664
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
128508664
04218 Cellular senescence
128508664
09144 Cellular community - eukaryotes
04510 Focal adhesion
128508664
09142 Cell motility
04810 Regulation of actin cytoskeleton
128508664
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128508664
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
128508664
04270 Vascular smooth muscle contraction
128508664
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128508664
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128508664
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128508664
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128508664
03041 Spliceosome [BR:
cgar03041
]
128508664
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
128508664
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
128508664
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128508664
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128508664
Spliceosome [BR:
cgar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128508664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
128508664
NCBI-ProteinID:
XP_053336065
LinkDB
All DBs
Position
20:20065209..20087219
Genome browser
AA seq
327 aa
AA seq
DB search
MAEGELDVDSLISRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKI
CGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQ
SMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDL
DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEK
KAKYQYGGMNSGRPVTPPRTATPPKKR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggggaactggacgtcgattcgctcatctccaggcttttagaggtgcgagga
tgtcgcccgggaaagatcgtgcagatgacggaggcggaggtgcgagggctgtgcattaaa
tcccgagagatcttcctgagtcagcccattctgttggagctggaggcgccgctcaaaatc
tgcggtgacatccacggccagtacacagacctgctgaggttgttcgagtacggcggattc
cccccggaggcgaactacctcttcctgggtgattacgtggaccgaggaaagcagtctctg
gagaccatctgcctcctgctggcgtacaagatcaaataccccgaaaacttcttcctgctg
cggggaaaccacgagtgcgcctccatcaaccgcatctacggcttctacgacgagtgcaag
cgcaggttcaacatcaaactctggaagacgttcaccgactgtttcaattgcctgcccatc
gccgctatcgtcgatgagaagattttctgctgccatggaggcctgtctcctgacctgcag
tctatggagcagatcagacggatcatgaggcccacagacgtccctgacacagggctgctg
tgcgacctgctgtggtccgacccagataaagacgtacaaggctggggcgagaacgaccgc
ggcgtgtccttcacgttcggagccgacgtggtcagcaagttcctcaaccgccacgatctg
gatctcatctgcagagcgcatcaggtggtagaggatgggtatgagttctttgccaagaga
cagctggtcactctgttctccgctccgaactactgcggcgagttcgacaacgccggcggc
atgatgagtgtggacgaaacgctcatgtgttcctttcagatcctgaaaccttcagagaaa
aaggctaagtaccagtacggcgggatgaactcggggcgcccagtgactccgcctcgcaca
gccaccccacccaaaaagcggtga
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