Clarias gariepinus (North African catfish): 128508722
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Entry
128508722 CDS
T10780
Symbol
limch1a
Name
(RefSeq) LIM and calponin homology domains-containing protein 1a
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
128508722 (limch1a)
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GFIT
Other DBs
NCBI-GeneID:
128508722
NCBI-ProteinID:
XP_053336153
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Position
20:complement(12147114..12207887)
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AA seq
1704 aa
AA seq
DB search
MASADEGSGSRPDHHEAAECGSGPAFQEAQKWIEAVTGRSFGEKDFRSSLENGILLCELL
SSIKPGLVKKINRLPTPIAGLDNLTMFLRGCEELGLKGSQLFDPGDLQDMSIRANLTGSD
CSRKLKNVLITIYWLGKTVNGCASYSGPTLNLKEFEGVLSMKECVSEEPESPKRSVRDSG
CVDNWESEHSDSLSPPRHRREDSFDSLDSFSSQSQPMASPDTALRANSDDLEADHRKVPD
VLKDDMSARRVSYKEPRAALPFNQYLPNKSNQSAFVPAHLRKRRSEREEERRSGSNSTSP
IREECVGISRETPLALNSQKTVTWVVEGGAEPQLDEAELKKMKKLEKAGIKVLPASVRYS
SPKVTAVEPDQAKSPSPDIIRRCDNTVLRAEHTHEWDEEDEDEEGDDRKVPDIQKDDLAS
RRARMNRPKPNVAHQFLPSSCSSKDRERWEGIRLSSQHAVLEMLEKMEQDKKSEPDTTPA
EGAIVTRKDNPFLSPRGKKKAEEEESEEEDEGKAVVPNVQKDDLARRRTQLGSVPQRDPR
QSLAQTSITQSDLKKWQRLSMTIESSEATPVEVSIITRKDNPFLSTEKARAKGNDDDEEE
EEEIAAGGQAALPNIQKDDLARRRSQTGGLPHRDHQQTLAQTALTQSDLEKWQRLKMSTE
NSGDSGPLTSPLKSSQSSISDPKHTLTFAEREALELRLAEKVKDEKEYEEEEEEEEKERQ
PDLKKDDMMARRTGVFQNAGGKVRNRFLPLPGSKKETRPAVSAQEESTGDPFMERNIKTK
RFKVGQRAEQVKPEPTVPSTVTQKEPESLGSTPTHADDSYKHCGNYDEDNDEGPLHNPEK
DDMLARRTGSYQKPSGNQFNAFLPKPGGVRSKKKNVSGQCEPNLTIGEQPTQSPTPRSVT
LPPADVDGMPRKCLPVLDGQKTDTVAMLGGEVDVVGGAQAQSPLPLPDPDARHKFGLDDD
VFPLKFSHMASSVSDETESVSLNDMRDEEEDVDSLSPHSQTRHERLHNQYNKVKEEEDQW
QDDLARWKNRRRSASQDLIRKEEERKMMEKLMKTEGGAHRRKSIKTYKEIVEEKERREQE
LHELYLQAATPEEKAAILQRYALRFTISDAILEKLQLPKLPSAVTIQSAAALNEEAEISE
SRMCTDVETDSSDQITQTITHKSPELTPIQASRTPQIEAPLSPSRTTISPEVPVSPVWIP
PAPSRPVPLLTAKPYSQPKFNQPSYKQVKNDGLVRVNGDSIPEDARENPVRPVSFTPSPP
KPASQSPQREQEILAGTETTAQECTQTLPGQKAECVKEETDFHSIAVQKRRTEDEASKTL
TESELTGKQTVPDMVVKRNCMVKTTIVTELREKHLLPVTDAPIPDQMSCSEGLSQKSDES
SRKSDFTSCSEGIDFTSECIETPILNLAKRVNHWTWDPNEERKRQERWQQEQERLLQEKY
QQEQERLKQEWEKAQKEVEEEERKHHEEEQRILEETVAPLTPHSSSGVTEAVPTSTTPHH
TIVLSLADWDRKQEMLEKEAKMNQKNGFQHRSDQTKAPSPPQQIDQKADLQESQSATPQL
QFTQDVSWSCKSESKQEWKKTASLDRNVSPSLNQPPRMRRSGSYENILGIHTSPSSQDTS
PSSPDRSVSAKKLCSSCAQPLGKGAAMIIDSLGLFFHIQCFKCGVCKGLLGDSSSGTDVR
IRNGVLNCHSCYMKSRAAGQPTTL
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgctgatgagggctccggttcccgaccggatcaccacgaagccgccgagtgc
ggctccggacctgcttttcaggaggcgcagaaatggatcgaggcagtgacagggagaagc
tttggcgagaaggacttcaggagcagcctggagaacggcattcttctgtgcgagctgctg
agttccatcaaaccaggacttgtgaagaagattaacagactcccgacacccatcgcagga
ctggataatctcaccatgttcctgaggggatgtgaggagttaggactaaagggatcacaa
ctgttcgacccaggagacctgcaggacatgtctatacgcgccaacctaacgggttcagat
tgcagtcggaaactaaagaatgtgctgatcactatttactggctgggcaaaactgtaaac
ggttgtgcgtcttatagtggtccaacgcttaacctgaaagagtttgaaggcgttttgtcc
atgaaggagtgtgtgagcgaggagcctgaatcacctaagcgcagtgtacgggacagcggc
tgcgtggacaactgggaatcggaacattctgattcgttgtcacctccgaggcacagacga
gaggattccttcgacagtctggactccttcagctcgcagtcacagcccatggcgtccccc
gatactgcgctccgtgctaacagtgatgatttggaagcggatcacaggaaggtgccagat
gtcctaaaggacgacatgtccgcccgccgtgtctcctataaagagcctcgtgctgcactg
cctttcaaccagtacctccccaacaagagcaatcaaagcgccttcgtgcctgctcatctg
aggaagaggaggagcgaacgtgaagaagagcgcagaagtggcagcaactccacatccccc
attagagaggagtgtgttggcatttcacgtgagacgccacttgctcttaactcccagaaa
acagtgacctgggtagttgagggaggggcggagcctcagctagatgaggcggagcttaag
aagatgaaaaagctagaaaaggcgggaatcaaagtgttgcctgcgtctgtgcgatacagc
agtcctaaggtgacagcagtagagcccgatcaggcaaaatcgccgtcccctgacatcatt
cgtcggtgtgataacaccgtccttcgggccgaacacacccacgagtgggatgaggaggac
gaggacgaggaaggagatgatagaaaagtccctgatatccaaaaagatgaccttgcgtcc
cggagggcgcgcatgaaccgaccgaaacccaacgtggcacatcagttcctgccaagctcg
tgtagcagtaaggaccgcgagcgttgggagggaatccggctctcttcccagcatgccgtg
ctggagatgttggagaaaatggagcaggacaagaaaagtgaacccgacaccaccccggct
gagggggcaatcgtaactcgcaaggacaatccctttctaagtcctcgtgggaaaaagaag
gcagaggaggaagagagtgaagaggaggacgaagggaaggcagttgtcccgaacgtacag
aaggatgatctcgccaggcggagaacacaactcgggtccgtcccacaaagggatcctcgt
caatcattggcacagacaagtatcactcagtcagacctgaagaagtggcagagactttca
atgaccatcgaaagcagcgaggccactccagtagaagtgtcaatcataacgcgtaaggac
aaccccttcctaagcacggagaaagcaagagcgaaagggaacgatgatgatgaggaggag
gaggaagagatagcggcaggcggtcaagcagcgttgccgaatatacagaaagatgatctg
gccaggaggcgcagtcagactgggggcctcccacatcgagatcatcagcagacgttggct
cagacggccttgacgcagtcagacctggagaagtggcagagactgaagatgagcacagag
aacagtggagactcaggacccctgacctcaccactcaagtcctcacaatcctccatttct
gaccccaaacacactttgacctttgccgagcgtgaggctctcgagttaaggctggctgag
aaagtgaaggatgagaaggagtatgaggaggaagaggaggaggaggagaaagaaagacag
cctgatttaaagaaggatgacatgatggctcgaagaaccggagtgtttcagaatgcgggt
ggtaaagtgcgtaatcggttcctcccactgcccggttctaagaaagagacgcgtccagct
gtttcggctcaggaagagagcacaggtgatccgttcatggaaaggaacatcaaaacaaag
agattcaaagtgggacaaagagctgagcaggtaaaacccgagccaaccgtaccatcaact
gtcactcaaaaggagccagaaagtcttggttctacgccaacccatgctgatgacagttac
aagcactgtgggaattacgatgaggataatgacgaaggtccccttcataacccggagaaa
gacgacatgcttgcaaggaggacgggatcataccagaaaccgagtgggaatcagttcaat
gcttttctgcctaaacctggaggtgtgagaagcaaaaagaagaatgtgagtgggcaatgc
gagccaaacctcacaatcggcgaacaacctactcagagtcccacccctagatctgtgacc
ctgccccctgcagatgttgatggcatgcccagaaaatgccttccggtcctggatgggcag
aaaacagacactgtggcaatgcttggtggggaagttgatgttgtgggcggggctcaggcg
caaagccctttacctttacccgaccctgatgcgcggcacaagtttggcctggatgatgat
gttttccccctgaaattcagtcacatggcttctagtgtttctgatgaaaccgagagcgtc
agtttgaatgacatgcgcgacgaagaggaggacgtggactcgctttcaccgcacagccag
acacgacacgagaggctgcacaaccagtacaacaaagtcaaagaggaggaggaccagtgg
caggatgacctggctcggtggaagaatcgaaggcgcagtgcctctcaggacctgatcagg
aaagaggaagagaggaagatgatggaaaaactcatgaaaactgagggaggtgcacatcgc
agaaagagcatcaaaacgtacaaagagattgtggaggaaaaggagcgtcgagagcaggag
ctgcacgagttatacctccaagccgcgactcccgaagagaaagcggccatattacagcgt
tatgccctccgctttaccatcagcgacgccatattggagaagctccagctcccgaaactc
ccgtctgctgtaacgatacaatctgcggcagcactgaacgaagaagcagagatttccgag
tctcggatgtgcacggatgtagaaaccgattccagtgatcagataacacaaacgataacg
cacaagagtccagaattaacacctatccaagcctcaagaactccacaaatagaagcccct
ctttctcccagcagaacaaccatatcccctgaagtccctgtctcgcctgtttggatcccc
cctgcaccatccagacctgtgccgttactaacggcaaaaccgtacagccaacccaagttt
aatcagccttcttataagcaagttaagaatgacggattggtgcgcgtgaacggtgactcc
attccggaggacgcaagagagaatccagtgagacccgtttccttcactccgtcaccaccg
aaaccagcaagtcagagtcctcagcgagaacaagaaatcttagctggaactgaaaccaca
gctcaggagtgcactcagaccttacccggtcaaaaagctgaatgtgttaaagaagagacc
gacttccatagcatcgctgttcaaaagaggaggacagaggacgaggcttccaaaaccctc
acagaatcagaactaacaggaaagcagaccgtccctgatatggtggtgaagcgcaactgc
atggtcaagaccaccatcgtgaccgagcttagagaaaaacatttactccccgtgacagat
gctcctattcctgaccagatgagctgttctgagggattaagccagaaatctgatgagagt
tccagaaagtctgactttacctcctgctcagagggaatcgacttcaccagcgaatgcatc
gaaaccccgatcttgaaccttgcaaagagggtcaatcactggacgtgggaccctaacgaa
gagcgtaaacggcaggagaggtggcagcaggagcaggagcgcctgctacaggagaagtac
cagcaggaacaggagagattaaagcaggagtgggagaaagctcagaaggaggtagaagaa
gaagaaaggaaacaccacgaagaggagcaacggatcttggaggaaacggtggccccgctg
accccgcactcatcctctggtgtgacagaagctgttcccacttccacaactcctcaccac
accattgtgctgtcactggcagactgggacaggaaacaggaaatgctggagaaagaggcg
aagatgaaccagaagaacggtttccagcacaggtctgatcagacgaaagcgccgtcacct
ccacaacagattgaccagaaagcagatcttcaagaaagtcaatcagctacaccgcagctg
cagttcacacaggatgtgtcatggagctgcaaatcagagagcaagcaggagtggaagaaa
acagcctccctggaccggaacgtgagcccgtcactaaatcagcctcccaggatgaggagg
tctgggtcgtacgaaaacattttagggatacacacatctccatcatcacaagacacatca
ccctcatctccagacaggtcagtgagtgcgaagaagctgtgctccagctgtgcacaacct
ctggggaaaggagccgccatgatcatcgacagtttaggccttttcttccacatccagtgt
tttaaatgcggtgtgtgtaaagggctgcttggtgactcgagctcaggaactgatgtccgg
atccggaacggtgttctcaactgtcactcatgctacatgaaatctcgtgctgctggtcaa
cccaccacattataa
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integrated database retrieval system
