Clarias gariepinus (North African catfish): 128508760
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Entry
128508760 CDS
T10780
Symbol
pdlim3a
Name
(RefSeq) PDZ and LIM domain protein 3a
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128508760 (pdlim3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128508760 (pdlim3a)
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128508760 (pdlim3a)
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Arc_trans_TRASH
Motif
Other DBs
NCBI-GeneID:
128508760
NCBI-ProteinID:
XP_053336207
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All DBs
Position
20:complement(3445147..3458863)
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AA seq
310 aa
AA seq
DB search
MAHCVILDGPPPWGFRLIGGKDFNQPLTIAKISPGSRASTAALSPGDIILAIDGISTSNM
MHCEAQSRMKQATRQLSLTIQRPETKLWSPQVRDDGRAHPFKMNLEAERQEYKPIGTGHN
RRAAPFVAAANIDDKRQVVSSAYNSPIGLYSSGNIQDALQGQLRGLIQSKPESPRTLTSI
EESDVYRMLQKEEGDQEPHEPRQSGSFKALQDYINSERTLPVVTKAVQAPTTKPLSPGGN
LHKLPMCDKCGNGIVGMVVRVHDKYRHPGCFVCSDCEENLKQKGYFIIDDEIYCETHAHA
RAKPPESPDL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcacattgtgtcatattggatggaccaccaccatggggctttcggctgattggagga
aaggatttcaaccagcctctcactatcgccaagatatctccaggcagcagggcatccaca
gcagccctctcccctggtgacatcatcctggctatagatggcatctccaccagcaacatg
atgcactgcgaagctcagagtcgcatgaagcaggccacgcgacagctcagcttaaccatc
cagaggcctgaaaccaaactgtggtcaccccaggtgagagatgatggccgagctcatccg
tttaaaatgaacctggaggcagagagacaggagtacaagccaataggtacgggtcataac
cgacgggccgcgccttttgtggcagcagccaacatcgatgacaagcgacaggttgtgagc
tccgcctacaactctcccatcggcctttattcttcaggaaatatccaggatgccttacag
ggtcagctcaggggcctgatacaaagcaagccagagagtcccaggactctcacgtctata
gaagaatcagatgtgtaccgtatgcttcagaaggaagagggagatcaggagcctcacgag
ccacggcagtcaggatcctttaaagccttacaggattacatcaacagtgagagaacgctt
ccggtcgtgacgaaggcggtgcaagcgcccacgacgaagcctctctcgcccggaggaaac
ctgcacaaactgcccatgtgtgacaagtgtggaaacggcatagttgggatggtggtgaga
gttcatgataagtatcggcacccgggctgcttcgtctgctcggactgcgaggagaacctg
aagcaaaaaggctactttatcatagacgacgagatctactgcgaaactcatgcacatgct
cgggcaaaacctcctgaaagcccagacctgtag
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