Clarias gariepinus (North African catfish): 128508838
Help
Entry
128508838 CDS
T10780
Symbol
prom1b
Name
(RefSeq) prominin 1 b isoform X1
KO
K06532
prominin 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128508838 (prom1b)
04090 CD molecules [BR:
cgar04090
]
128508838 (prom1b)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128508838 (prom1b)
CD molecules [BR:
cgar04090
]
Proteins
128508838 (prom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Claudin_2
Exonuc_VII_L
DUF1218
Tweety
YscO-like
SH3_14
Baculo_PEP_C
CRR7
Motif
Other DBs
NCBI-GeneID:
128508838
NCBI-ProteinID:
XP_053336286
LinkDB
All DBs
Position
20:complement(12293278..12341904)
Genome browser
AA seq
886 aa
AA seq
DB search
MARVLVMLMCCWSFVSGAARTEPEAAHGHALDFGSVPAVVHETRALYEPGAVDMLFHIVH
AFLHTVQPNPFPADLIVKILQQNTKGIKPDELHKPENIVLTLQAIYYEIGFIVLATLGVV
FVLLMPLVGLFFCLCRCCENCGGEMHQRHRKNADCQRGFYTFLLITSSVFIAVGVLVAYA
GNHNITYQIKNTKQLVRSNIQDLKSLASYTPMQIDYLTAQYTTAKNKVLSDLDNIGPLLG
RQIHNQMDRDVMPALDNVLRMAAVKVENAIKAMRDTKEALENVSTSLETLQEASTKLRRS
LQLERTSLSNTLNDPACRIGNATHTCNSIRATLNQLAVSANFNELADVSPHLANLKTVME
TDLSYIVQKGYSAFNDTSRIVSEQTHDIMAKVKASLDKSEAEIIAFTSAFPVEPALENFT
RFLTESEKDIEAFYPHIDQLDFYRWIGCVVLCCMVVLILAFNLLGLMSGMCGRDKSATPT
TRGCLSNTGGNLLMAGVGFSFIFSWVLMGVVLITFVAGGNVEKLVCEPLANRQLFKIIDT
PYIVHPGKKNFLPGMLFQNSNIDLTIGSLYSDCYENNGIYSALQLENQFHFIQFINRTVN
NHDLAEIFEGVSVDLDGIILLDEEGKDNLINFANAGLGDINYQAYLSEVNKGVTVVDLLS
FANELEGEADHLPRGALGNALKGHASSIRRIHKEQVLPMEQAMKFVRARSLLSQSIRLLQ
TTVEDLPTKVTNVLSAIDAAEYLIANNASHVVKKETEKFTNNLMGYLKQYVTWVQLSLML
EVAQCKPISNIIDSLEIVGCSFLVDSVNTFWFGLGGCCLFLIPSIIMSVKLAKFYRRMDT
EDVLEDKQWWKLKTFQENRDRRDFTQTMKLHLAQRPGVKLPRNGVP
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgtgctggtgatgctgatgtgctgctggagttttgtctccggggccgcgcgc
acggaacccgaggctgctcacgggcacgcgctggacttcggctccgtgccggcggtggtg
cacgagacgcgcgcgctctatgagcccggagccgtggacatgctgtttcacatagtgcac
gcgtttctccacacggtacagccaaaccccttcccagcagatctcattgtcaagattttg
caacaaaacacaaaaggaatcaaaccagatgagcttcacaagcctgagaacattgtcctt
acgctacaggccatttattatgagatcggcttcatcgttttggcaacgctgggtgttgtg
tttgtgctcctgatgccactggtgggtttatttttttgcctgtgtcggtgctgtgagaac
tgcggaggcgagatgcaccaaaggcaccgcaagaatgctgactgccaacgtggcttctat
acgttcctgctcatcacctcatcggtgttcatcgcagtgggtgtactggttgcctacgct
ggaaaccacaacatcacataccagatcaaaaataccaaacaactcgtccgctccaacata
caagacctgaaatccctggccagttatacgccgatgcaaatcgactatctgactgcacaa
tacacaacagccaaaaataaagttctctccgatctagacaacattgggccgttgttgggt
aggcagatacacaaccagatggacagagacgtgatgccagctttagacaacgtactccgc
atggcagccgtcaaagtggaaaatgctattaaagcgatgcgagacactaaggaggcttta
gagaacgtgagcacgtccctagagacattacaagaagcaagtaccaagctgaggaggtct
ttgcagttggagcgcacttcgctttcaaacacactcaacgatccagcctgccggatcgga
aacgcaacacacacatgcaacagcatccgggccacgcttaaccagctggctgtcagcgcc
aactttaatgagctggcggatgtcagtcctcacttggcaaatctaaaaacggtgatggag
acggatctcagctacattgtacagaagggatactctgcttttaatgatacttccaggata
gtaagcgaacagacacacgacattatggccaaggtgaaggcttcgttggataagtcagaa
gcagagattattgctttcaccagtgcattcccagtggaaccggctttagagaatttcact
cgctttctgacggaatcagagaaggacattgaagcgttctacccacatattgaccagctt
gacttttaccggtggataggctgcgtggtgctgtgttgcatggttgtactgattctggcg
tttaaccttctgggtttgatgagtggaatgtgtggccgtgataagagcgccacaccgaca
acacgcggctgcctctcaaacacaggcggcaatctcctcatggcaggtgttggctttagc
ttcatcttttcatgggtgctgatgggagttgtgctcatcacttttgttgctggaggaaat
gtggagaagctggtgtgtgagcctctggccaaccgacaactgtttaagattatagacaca
ccatacattgtccatcctgggaagaagaatttcctccctgggatgttgtttcaaaactct
aatattgatcttaccatcggcagtctgtacagtgattgttatgagaataacggcatatat
tctgcactacaacttgagaaccaattccacttcatccagtttatcaacagaactgtgaat
aatcatgacctggcagagatattcgagggagtaagtgtggacttggatggaataatcctg
ctggacgaagaaggaaaagacaatctcattaatttcgctaatgcaggccttggagacatc
aactaccaggcctatctctcagaggtcaataaaggagtaactgttgtagatcttctctcc
tttgccaatgaactggagggggaggcagaccatctgccacgtggtgctctcggaaatgct
ctaaagggccacgctagtagcatcagacggatccataaagagcaagtactgcccatggag
caggccatgaaatttgtcagagccaggagcttattaagtcaaagtatcaggttactacag
accacagtggaagaccttcctactaaagtgactaatgtgctgagtgccatcgatgcagct
gagtatctaattgccaacaatgcctcacatgtggtcaaaaaggagacagaaaaattcacg
aataatttgatgggataccttaaacaatatgtcacctgggttcagctctcattaatgctg
gaggtagctcaatgcaaacccatcagtaacatcattgactcgctggagattgttggctgc
agtttcctagtggactcagtgaacacattctggtttggactgggtggctgttgtttgttc
cttatccccagtatcatcatgtctgtcaaactcgccaaattctaccgcagaatggacaca
gaggacgtcctcgaagataaacagtggtggaagctaaaaacctttcaggaaaacagagat
agaagagacttcacgcaaacaatgaaactacacttggcacagagacctggagttaaactg
cccagaaatggagtaccttga
DBGET
integrated database retrieval system
