Clarias gariepinus (North African catfish): 128508868
Help
Entry
128508868 CDS
T10780
Name
(RefSeq) stimulated by retinoic acid gene 6 protein-like isoform X1
KO
K23088
vitamin A receptor/transporter (stra6) family protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128508868
Transporters [BR:
cgar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
128508868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBP_receptor
HemY_N
Motif
Other DBs
NCBI-GeneID:
128508868
NCBI-ProteinID:
XP_053336334
LinkDB
All DBs
Position
20:1763435..1777929
Genome browser
AA seq
625 aa
AA seq
DB search
MSAFVSTTPEQSNWSQDIPSNAMNEVSLPACGVYKTLFMWLNLPFSLFILVLLSFLERRR
KVYDCERRFPCLAGRFSFTVPLDFTGKMRNRWSYVFAFGAVARFVISLILNDAKDDSVPY
PTALVLVKDALLVSMVCMPFFTCLSTPHRLLGGVLGLLYSLSWFVAQMWFLIVCKGTVPK
DNSDGEYSIRIELLLNIPPILFLGFLVCRFGSITVRGILNRLRNYSKQEELKKHEYKYVQ
CLLRRPAGVPVEKSWFQRNVYEWDPYFRFPNRIIATIMLSFYGLYITVTGEQTPYWSFVS
NVTMFWEEYLKQIWDEKSFQKHLNYVTYSWYISSACAALTCVIHISEVLVCYRKHIKSLR
VGERKFLPKTYKLEPTHGVVGLLKYPGYQIAFSVWGYVILRSVMFVLSLIFVYLVISPIR
EDGFLDWLKLFAKTMGSVCFLLALVWLQRVLGYFFFLQDKISPTDEGKPLALDNRKVFHN
FNYFFFFINVILGFMSCLLRVIKSTSMGLMLLTRINRTIMPEGFEKLDKSYCMWVGMIMV
DHHHTNPVLVCFCHLLLKHTLESLQNSEYSRLNPEPLAKNRVRIRWLVMYTLLRNPKLIF
LRKKHKQNKHKEAERAFTWAVSNMA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttttgtcagtaccactccagagcagagtaactggagccaagacattccttca
aacgctatgaatgaagtgagtttacctgcctgtggagtttataaaacactgtttatgtgg
ctgaatctgccgttttctctgtttattttagtcctgctgtcgtttcttgagcgcagaaga
aaggtctatgactgtgagaggagattcccgtgtctggccggccgattcagcttcactgta
cctctggacttcactggcaagatgcggaaccgatggtcttatgtttttgccttcggtgcc
gtggcccgctttgtaatcagtctaatattgaatgacgccaaagatgacagcgtgccatac
ccaacagctttggtactagtcaaagatgcattgctggtgagcatggtctgcatgccgttc
ttcacctgtctatcaacaccacaccgcctgctcggaggagtcctggggctgctttattca
ctctcctggtttgttgcacagatgtggtttctgattgtgtgcaaaggaaccgtacccaag
gataacagtgatggggagtacagtatacggatagagttgttgttaaatatcccaccgatc
ctgttcttggggttcttggtgtgccgctttggttccatcacagtgaggggtatactgaac
cgcctgaggaattacagcaagcaggaggaattgaagaagcacgagtacaaatatgtccag
tgtttgctgagaaggcctgctggagtgcctgttgagaagagctggttccagaggaatgtg
tatgagtgggatccatattttagattcccaaacaggatcatcgccaccatcatgctctcc
ttttatgggttgtatataacagtgacaggggagcagacaccatactggagcttcgtctcg
aatgtaaccatgttttgggaagaatatttaaaacaaatctgggacgaaaaatcctttcaa
aaacacctgaactatgtcacatactcctggtatatctcatcagcttgtgctgcgctcacg
tgtgtcattcacatcagtgaggtgttggtgtgttacaggaaacatataaaatcgctgcgc
gttggagaaaggaaattcctgccaaagacgtataaactggaacctacacatggagtggtt
ggcctgttgaagtatcccggctatcagatcgccttctccgtctggggttacgtgatcttg
cgcagtgtgatgtttgtgctcagcctgatatttgtatatctggttatatcaccgattcgt
gaagatggatttctcgactggctgaagttgtttgccaagactatgggaagtgtctgcttc
ttgcttgcactggtgtggctgcagcgtgtcctggggtatttctttttcctgcaagacaaa
atctcacctacggatgagggaaagccgttagcactcgataacaggaaggtcttccacaac
tttaactacttcttcttttttattaatgtgatcctgggctttatgagctgcttgttgcgt
gtcattaaaagcacctccatgggtctgatgttgctgacacgcatcaataggaccataatg
ccagagggcttcgagaagctggacaaaagttactgtatgtgggtgggaatgataatggtg
gatcatcatcacactaacccagtccttgtgtgtttctgccacctgctgcttaaacacact
ttagagagtctccaaaacagcgagtactcacgtttaaaccctgagccgctagcaaagaac
cgagttcgcattcgctggcttgtcatgtacaccctactgaggaaccctaaactcatcttc
ctgagaaagaaacacaagcagaataaacacaaagaggctgagcgtgccttcacttgggct
gtctcaaacatggcataa
DBGET
integrated database retrieval system
