Clarias gariepinus (North African catfish): 128508878
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Entry
128508878 CDS
T10780
Symbol
marchf1
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF1
KO
K10656
E3 ubiquitin-protein ligase MARCH1/8 [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128508878 (marchf1)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128508878 (marchf1)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
128508878 (marchf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINGv
SurA_N_3
Motif
Other DBs
NCBI-GeneID:
128508878
NCBI-ProteinID:
XP_053336350
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All DBs
Position
20:complement(11729341..11735680)
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AA seq
449 aa
AA seq
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MPVHQISVMPVSEDASFNGQDSIRTRNKNKVNKVHRSTQESALSGVSQPFATASCQEMGS
TGDVFNSGYHGPNHTTTIVPVNHTPITKQQVKRRYRRHRRHRKSSGCIADWVEQSGITNT
KNDSSSEDEQYHRAERSWSREKARRRRRPLVFPGSCGDKAQKQDLKTSQRTSFNMDELES
NSANHASKGSKEEEEEEEEEEEGPITKTYEEQGPGGTDMAVPTTQKYTKPSNQNRTLQEA
CTDNEPELCRICHSEADEECPLIMPCRCTGSLRFVHHACLHQWIKSSDTRCCELCKFNFI
MESHLKPLRKWENLNLSAGERRRIFCAVIFHLMAMGCVAWSLYVFVLMHYTTEGLQQGPL
EWLFWTKLGIVTLSMVAGLIFMHIQCKVYLNIWRRLKAFNCVIFVHNCPDLVCNMAEKAP
PPHAVATHQTQTSVHCPGPAGRSAEVAPV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgcatcaaatatccgtcatgcctgttagtgaggatgctagttttaatgggcag
gacagcatcagaaccagaaacaagaataaagtaaacaaggtgcataggtctacacaagag
tcagcactgagtggcgtatcacagccttttgccacagcttcctgtcaggaaatgggcagc
actggtgatgtattcaactctggatatcatggcccaaaccataccaccaccatcgttccc
gtaaaccacactcccatcactaagcaacaggtgaagcgtcgataccggcgacacaggcga
caccggaagagcagtggttgcattgcagactgggtggagcagtcaggaatcacgaacacc
aagaatgactcttcttcagaagacgaacagtaccacagggcagaacggtcctggagtcgt
gagaaagcccggcgtagacgacgtccacttgtgttcccgggttcttgtggggataaagcc
cagaaacaggacctcaaaacgtcacagaggacatcctttaatatggacgagctagagagc
aattcagccaatcatgccagcaaaggtagtaaggaggaggaagaggaggaggaggaggaa
gaggaggggccaattacaaagacttatgaggaacagggaccaggaggcacagatatggcc
gtccctacaactcagaaatacacaaagccatccaatcagaacaggactctacaggaagca
tgcactgataatgaacctgaactgtgcaggatctgccacagtgaagctgatgaggagtgt
cctctcatcatgccgtgtaggtgcacagggagtctacgcttcgtccaccacgcctgcctg
caccagtggatcaaaagctcggacacgcgctgctgtgaactgtgtaaattcaacttcatc
atggagtcgcacctcaaacccttgcgcaagtgggagaacttgaacctgtccgcaggtgaa
cgcaggaggatcttctgcgccgtgatctttcacctgatggccatgggctgtgtcgcctgg
tccctttatgtcttcgtcctcatgcactacactactgaaggattacagcaaggaccgctg
gagtggttgttctggaccaagcttggcattgttaccctcagcatggtggcaggcctcatt
ttcatgcacatccagtgcaaagtctacctaaacatctggaggcgcctgaaggcttttaac
tgtgtcatctttgtgcacaactgtccagacttggtgtgcaacatggctgaaaaagccccg
ccccctcacgctgttgccacccaccagacccaaactagcgttcactgtcctggcccagca
ggacgaagtgcagaggtggcaccagtttaa
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