Clarias gariepinus (North African catfish): 128508886
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Entry
128508886 CDS
T10780
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
128508886 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128508886 (cnga1a)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
128508886 (cnga1a)
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
EMC3_TMCO1
FancD2
DUF4614
DUF3043
CLN3
NPR3
ADI
FAM76
Motif
Other DBs
NCBI-GeneID:
128508886
NCBI-ProteinID:
XP_053336359
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All DBs
Position
20:26404907..26414122
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AA seq
637 aa
AA seq
DB search
MMIVTTSGISVPPRMAPDNDSEEDPSPVPHYNFNNSNNNKEQEKRKKVKKDKNEKKEKKE
RKKKKEKEQENEKEKEKEKEKDKEKEKKDVPKEVFVINPASNLYYQWLLLITLPVMYNWT
MIIARACFEELQHEYLFTWFFFDYISDLLYLADMAFRTRTGYLEQGLLVKDQKLLIKHYK
DSTQFRLDVISMIPTDVLYFILGLDYPEIRINKLLRINRMFEFFDRSQTMTNYPNIFRIC
TLVMYIIIIIHWNACLYFSFSKAIGFGSDPWVYPALTEPEFGDLLRKYSFSLYWSTLTLT
TIGETPSPELDSEFLFHVVDFLVGVLIFATIVGNIATMISNMNAAQAQFQARIDSIKQYM
QVRHVSKDLEKRVIKWFDYLWTNKKAQDEREVLRYLPDKLRAEIGMNVHLDTLKKVRIFA
DCEAGLLIELILKLRPQVFSPGDYICRKGDIGREMYIIKEGKLAVVADDGVTQFCVLGDG
SYFGEISILNIKGSKAGNRRTANIRSIGYSDIFCLSKDDLMEALTEYPDAKNMLEEKGRQ
ILMKDGLIETDPANLKPDQKDLEDRVNRIYNTMVLMQAKIKKLLADYEETEKQLKERIVQ
IERYTGEDVEEDEDGEKEVKEEASPEKVKEEKKEGDE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgtgactacttcaggaatctcagttcctccccgaatggctccagacaacgac
agcgaggaagatccttctcccgttccacactataacttcaacaacagcaacaacaataaa
gaacaagaaaaaaggaagaaagtaaaaaaggataaaaacgagaaaaaagaaaagaaagaa
aggaaaaaaaagaaggagaaggagcaggaaaatgaaaaagaaaaggagaaagaaaaagag
aaggacaaggagaaggagaaaaaagatgtgccgaaagaggtgtttgtgattaacccagcc
agtaacctgtattaccagtggctccttctcatcactttgcctgtcatgtacaactggacc
atgatcattgcaagagcctgctttgaagaactgcagcatgaatatctgttcacttggttc
ttttttgactacatctctgatctcctttacctggcagacatggcctttagaacaaggact
ggctaccttgagcagggtttgcttgttaaagatcagaaacttctcatcaagcactacaag
gacagcactcagtttcggctagatgtcatctcaatgatacctaccgatgtgctgtatttc
atccttggactggactaccccgagatccgcatcaacaagctgctacgcatcaaccgcatg
tttgaattctttgaccgctcacagaccatgaccaactatcccaacattttccgcatctgc
accttggtcatgtatatcatcattatcattcactggaatgcctgcctctacttttccttt
tctaaagctattggttttggttcagatccctgggtctacccagcactcactgagcctgag
tttggggacttgttaagaaagtactctttcagcctttactggtccacactgactctcacc
accattggggaaacaccatctcctgagcttgactctgagtttctctttcatgttgtagac
tttctggttggtgtcctaatctttgctactattgttggaaatattgccacaatgatctcc
aacatgaatgcggcccaagcccaatttcaggcacggatagacagcatcaagcagtacatg
caagtgcggcatgtcagcaaggatctggaaaagcgagtcatcaagtggtttgactatttg
tggacaaataagaaagcacaggatgaaagggaagtacttcggtacctgccggacaagctg
cgagcagagattggtatgaacgttcacctagatacattgaagaaggtgaggatctttgca
gactgtgaagcaggtctgctaattgagctcattcttaaattaagacctcaagtgtttagc
cctggtgattatatctgccgcaagggtgatattggccgggagatgtacatcatcaaggag
ggaaaactggccgtggtggctgatgatggtgtcacacagttttgtgttctgggtgatgga
agctattttggggagatcagcatcctgaacatcaaaggcagcaaagcaggaaaccgcagg
acggctaacatccgcagcattggatactcagacatcttctgcttgtccaaagatgactta
atggaagcactgactgagtaccctgatgccaaaaacatgctggaggaaaaggggaggcag
atccttatgaaagatggcttaattgaaacagacccagcgaacctgaagccggatcagaag
gaccttgaggacagagtgaaccgaatttacaacaccatggtgctgatgcaggccaagata
aagaaactgctagcagattatgaggaaactgagaaacagctgaaagagcgcattgttcag
atagaacgctatactggggaggatgtggaagaggatgaagatggagagaaggaagtgaaa
gaagaggcttcaccagagaaagtcaaggaggagaaaaaagagggggatgagtag
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