Clarias gariepinus (North African catfish): 128508960
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Entry
128508960 CDS
T10780
Symbol
unga
Name
(RefSeq) uracil DNA glycosylase a isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128508960 (unga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128508960 (unga)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
128508960 (unga)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128508960 (unga)
Prokaryotic type
128508960 (unga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
128508960
NCBI-ProteinID:
XP_053336421
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All DBs
Position
21:11266120..11274632
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AA seq
294 aa
AA seq
DB search
MASVFVRARRCSGVLRAGCRSWSDEHSEVFSQVKKLKVGGDDDASPLSPEQLERIAKSKA
AALERLCSRRGPADVGESWRRALGPEFNKNYFTSLMNFVEEERQKHTVYPPPGQVFTWTH
VCQIEDVKVVVLGQDPYHGPNQAHGLCFSVQRPVPPPPSLVNMYKELESDIEGFQRPGHG
DLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVQWLSTNLEGLVFMLWGSYAQ
KKGAAINRKRHHVLQAVHPSPLSAHRGFFGCKHFSKTNELLLKSGKKPIDWKAL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtgttcgtgcgcgcgcggcggtgttccggagtgttgcgggcggggtgtcgg
agctggagtgatgaacacagcgaggtcttctcccaggtgaagaagctgaaggttggcggt
gatgatgatgcgagtccgctgagtccggagcagctcgagcggatcgccaagagcaaggcg
gcggctttggagcggctgtgttcccgccgcgggcctgcggatgtcggggagagctggagg
agagcgctggggccggagttcaacaaaaactacttcacatcgttaatgaacttcgtggaa
gaggagaggcagaagcacacggtgtatccgcccccggggcaggtgttcacatggacacac
gtgtgccagattgaagacgtgaaggtggttgttctcgggcaagatccgtatcacggaccg
aatcaggctcacggcttgtgtttcagcgtgcagagacccgttccaccaccaccaagtctg
gtgaacatgtataaagaactggagtcagatatcgaaggctttcagcgtcctggccacggt
gatctgacgggatgggcaaagcaaggtgttctgctgttgaacgcggtgttgactgtacga
gcgcatcaggccaactcgcacaaagataaaggatgggagacgttcacggacgctgtggtg
cagtggctcagcactaacctagaggggctggtcttcatgctctggggctcgtacgctcag
aaaaaaggcgccgcgatcaacagaaaaagacaccatgtcctccaggctgttcacccgtcc
cctctttccgctcaccgtggcttcttcgggtgcaaacatttctcgaagaccaatgagctg
ctgctgaaatctgggaaaaaacccatagactggaaagcactgtga
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