Clarias gariepinus (North African catfish): 128508977
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Entry
128508977 CDS
T10780
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128508977 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128508977 (si:dkey-3h3.3)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128508977 (si:dkey-3h3.3)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128508977 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-RING_10
KH_DTX3L
zf-RING_11
zf-RING_4
zf-RING_6
DUF1272
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
128508977
NCBI-ProteinID:
XP_053336446
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All DBs
Position
21:21138798..21144771
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AA seq
436 aa
AA seq
DB search
MGQEFIQSGELVVCVPGVCMFSPCLIFPNVTLLIDHEACKEPWRVSKKSDPTRISGTFKC
IEDTFLELSRKQSGHSGPYGAPKERSSEYEHTSPTMKSASSATVEPVEVDDVIMSYIKQK
CSAELNKITPSKISMQVNKTQVTFHPQDTVLAQLARESFVTFYQKIATTLQSRSYDLDAR
HHQPLFAKFPELLISSGPRQTDEVTLTGRFISLEKFEQFLKIPSPRQTNNPVNMSAAASS
QAVQNTSADKEETCSICLEPMVKSEIKMLEKCKHSFCKDCLKQAFKVKPVCPTCGLIYGA
LNGTQPKGGKMKVTHERDSLPGYEKYGTIVIHYIIPNGVQKDEHPNPGQPYQGAVRLAYL
PDCTEGRKVLKLLQQAFDQRLTFTVGRSSTTGRSNVVTWNDIHHKTSRTGGPTAYGYPDS
EYLKRVQEELKDKGIY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggggcaggaattcatccagtccggtgaactggtggtctgtgtgcctggagtttgcatg
ttctctccgtgcttgatatttcctaacgtgacacttcttatcgatcacgaagcatgtaag
gagccatggcgagtttctaaaaagtctgacccaacacgcatcagtggaacctttaaatgt
attgaggatacctttttggaactttcacgcaagcagagtggtcatagtggtccgtacggg
gcacctaaagagaggagcagcgaatacgagcacacatcacccacgatgaagtcggcttcc
agtgcgacagttgaaccggttgaggtcgacgatgtcatcatgagttacataaaacaaaaa
tgctctgcagagctcaataaaatcactccttctaagataagcatgcaagttaataaaact
caggtgacctttcacccacaggacacagtcctggctcaactggcaagagagagctttgta
actttctatcagaaaatcgctacgacactgcagagtagatcatatgatttagacgcaagg
caccatcagccattgtttgcaaagtttccagagctcctaatcagcagtggaccaaggcaa
accgatgaagtaacgctcactgggagattcattagccttgaaaagttcgagcagtttttg
aaaattccttctccaagacaaaccaacaaccccgtgaacatgagcgctgctgcctccagc
caggcggtacagaatacaagcgctgacaaagaggaaacctgttccatttgtttggagcca
atggtgaaatcagaaataaaaatgctggagaaatgtaagcattccttctgtaaagactgt
ttaaagcaagcttttaaagttaaacccgtctgtcctacatgcggccttatatatggtgcg
ctaaatggaacccaacccaaaggaggcaaaatgaaagtcacgcatgaaagggattcttta
cctggttatgaaaaatatggaacaatcgtcattcactatatcattccaaatggggttcag
aaggatgaacacccaaatccaggccagccttaccaaggtgctgtacgtttggcctacttg
ccagactgcacagaaggaagaaaagtccttaagctccttcaacaagcatttgatcaaagg
ttaaccttcacagtcggacggtcatcaaccactggcagaagtaacgttgtcacctggaat
gacattcaccacaagacatcccgcactggtggacctactgcttacgggtacccagactct
gaatatttgaaacgagtccaagaggagctgaaagataaaggaatttactga
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