Clarias gariepinus (North African catfish): 128509020
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Entry
128509020 CDS
T10780
Symbol
arrdc1a
Name
(RefSeq) arrestin domain-containing protein 1a
KO
K26228
arrestin domain-containing protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128509020 (arrdc1a)
Membrane trafficking [BR:
cgar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
128509020 (arrdc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
Vps26
LDB19
Spo0M
Motif
Other DBs
NCBI-GeneID:
128509020
NCBI-ProteinID:
XP_053336503
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All DBs
Position
21:complement(23245240..23257522)
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AA seq
457 aa
AA seq
DB search
MGKLQEFQITLKDNKVVYSPGESISGTVKISTAQPIQCKAIKVNCYGACGVTSKMNDMDW
LEEEQYFNSSLSVADKGTLKQGEHIFPFKFLIPATAPTSFEGPYGRIMYKIRAFIDTPRF
SKDYKTEKPFYMLNNINLNEMPEIYDPNTSNVTKNFTYMLVKNGTVVLVAKTDQRGYIAG
QVIKVSTEIDNQSGKNTGHVVACLIQKVTYHTKKPTHELRTIAEVEGAGVKAGKQAQWKE
QIIVPPLPQSSLAGCNLIEINYYIQVSLKYPEMSLTLPIHIGNVAIDPSLRPPPKAKSTK
TAPTPTPRTNPASPTSLNAPASSTSPPSASPNLPPRPAPRPRPRSMIVTPSAPPAEPDMM
GSRDGEEIPTKVHSQHQGPMSPSAFSYAPGLVFPQSNSSNPSAPHFSLSTGATIPFFSEG
NGPPVPTSCPFILPPDYRSSAHPHEPPPAYEDSFLTT
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcttcaggaatttcagataaccctgaaggacaataaagtggtgtacagtccc
ggagagtctatttcagggacggtgaaaatctccaccgctcagcccatccagtgtaaagca
attaaggtaaactgctacggggcctgcggtgtgaccagcaaaatgaacgacatggactgg
ctcgaggaggagcagtacttcaacagctctctctctgtagctgataaaggcactttgaaa
cagggtgaacacattttccccttcaagtttctcatcccagccacagctccgacatccttc
gaagggccatacggcaggatcatgtacaaaattcgagcatttatcgacacgcctcgcttc
tcaaaagactacaagacagagaaacccttctacatgctgaacaacattaaccttaacgaa
atgcctgagatctatgacccaaacacttcaaatgtaacaaagaatttcacatacatgctg
gtgaagaatgggacagtcgtcctggtggctaaaacggaccagcgtggatatattgcaggt
caggtcattaaagtatccacagagatcgacaaccaatcagggaagaacacaggtcacgta
gtggcttgtctaattcagaaagtgacgtatcacacgaagaaaccgacacacgaattgagg
acgatagcggaggtagagggagctggagtgaaagctggcaaacaggctcagtggaaagaa
cagattatcgttcctcctcttccacagtcctccttggctggatgtaacctcatcgagatt
aactattacatccaggtttctttgaagtatccagaaatgtccctgacgctgccaattcat
atcgggaacgttgccatcgatccgagtctacgtcctcctcccaaagccaaatccaccaag
acagctcccactccaacaccaaggactaacccggcgtctccaacttcactgaacgcccct
gcttcctctacttctccaccttccgcctcccctaacctgcctcctcggcccgcccctcgg
ccccgaccccgcagcatgattgtcactccgagcgcacccccagcagagccggacatgatg
ggatccagggatggcgaagagattcctactaaggtccactctcagcaccagggtcccatg
tctcccagcgcctttagctacgccccaggcctcgtgttcccgcagagtaacagcagcaac
ccctcagcgcctcacttttccctctccaccggggccaccatcccattctttagtgaagga
aacggcccacccgtgcccacttcctgcccgttcatcctgcctccggattatagaagctca
gcacacccacatgagcctccaccagcctatgaagacagctttctcaccacataa
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